RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 CHCHD5Q9BSY4 110 aa11.14□□□□□ -0.63
CCDC9-202ENST00000595659 TPPP3Q9BW30 176 aa11.14□□□□□ -0.63
CCDC9-202ENST00000595659 FLG2Q5D862 2391 aaPredicted RBP11.13□□□□□ -0.63
CCDC9-202ENST00000595659 ANGP03950 147 aaKnown RBP11.13□□□□□ -0.63
CCDC9-202ENST00000595659 Q0VG73 95 aa11.13□□□□□ -0.63
CCDC9-202ENST00000595659 ATRAIDQ6UW56 229 aa11.13□□□□□ -0.63
CCDC9-202ENST00000595659 NTM-AS1Q6ZSK4 140 aa11.13□□□□□ -0.63
CCDC9-202ENST00000595659 C1orf43Q9BWL3 253 aa11.13□□□□□ -0.63
CCDC9-202ENST00000595659 CRPP02741 224 aa11.12□□□□□ -0.63
CCDC9-202ENST00000595659 PLA2G1BP04054 148 aaKnown RBP11.12□□□□□ -0.63
CCDC9-202ENST00000595659 SMIM17P0DL12 118 aa11.12□□□□□ -0.63
CCDC9-202ENST00000595659 KIF25-AS1Q9Y6Z4 181 aa11.12□□□□□ -0.63
CCDC9-202ENST00000595659 J3QL48 77 aa11.11□□□□□ -0.63
CCDC9-202ENST00000595659 EIF5AP63241 154 aaKnown RBP11.11□□□□□ -0.63
CCDC9-202ENST00000595659 GAGE6Q13070 117 aa11.11□□□□□ -0.63
CCDC9-202ENST00000595659 CENPWQ5EE01 88 aa11.11□□□□□ -0.63
CCDC9-202ENST00000595659 CLPSL2Q6UWE3 100 aa11.11□□□□□ -0.63
CCDC9-202ENST00000595659 DMBT1Q9UGM3 2413 aaPredicted RBP11.11□□□□□ -0.63
CCDC9-202ENST00000595659 RAB19A4D1S5 217 aa11.1□□□□□ -0.63
CCDC9-202ENST00000595659 HLA-DQA1P01909 254 aa11.1□□□□□ -0.63
CCDC9-202ENST00000595659 MGPP08493 103 aa11.1□□□□□ -0.63
CCDC9-202ENST00000595659 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.1□□□□□ -0.63
CCDC9-202ENST00000595659 AP1S3Q96PC3 154 aa11.1□□□□□ -0.63
CCDC9-202ENST00000595659 MANBALQ9NQG1 85 aa11.1□□□□□ -0.63
CCDC9-202ENST00000595659 IGLV2-8P01709 118 aa11.09□□□□□ -0.63
CCDC9-202ENST00000595659 OR2D3Q8NGH3 330 aa11.09□□□□□ -0.63
CCDC9-202ENST00000595659 C11orf52Q96A22 123 aa11.09□□□□□ -0.63
CCDC9-202ENST00000595659 DAZAP1Q96EP5 407 aaKnown RBP11.09□□□□□ -0.63
CCDC9-202ENST00000595659 CHAC1Q9BUX1 264 aa11.09□□□□□ -0.63
CCDC9-202ENST00000595659 USP17L23D6RBM5 183 aa11.08□□□□□ -0.64
CCDC9-202ENST00000595659 RBX1P62877 108 aa11.08□□□□□ -0.64
CCDC9-202ENST00000595659 FER1L6-AS1Q8NA97 138 aa11.08□□□□□ -0.64
CCDC9-202ENST00000595659 CIRBP-AS1Q8TBR5 109 aa11.08□□□□□ -0.64
CCDC9-202ENST00000595659 DEFB104AQ8WTQ1 72 aa11.08□□□□□ -0.64
CCDC9-202ENST00000595659 VAX2Q9UIW0 290 aa11.08□□□□□ -0.64
CCDC9-202ENST00000595659 IGLC6P0CF74 106 aa11.07□□□□□ -0.64
CCDC9-202ENST00000595659 LINC00269Q8N2A0 174 aa11.07□□□□□ -0.64
CCDC9-202ENST00000595659 TRBV25-1A0A075B6N4 114 aa11.06□□□□□ -0.64
CCDC9-202ENST00000595659 TRAV1-1A0A0B4J248 108 aa11.06□□□□□ -0.64
CCDC9-202ENST00000595659 M0QY20 66 aa11.06□□□□□ -0.64
CCDC9-202ENST00000595659 C14orf177Q52M58 125 aa11.06□□□□□ -0.64
CCDC9-202ENST00000595659 SUMO4Q6EEV6 95 aa11.06□□□□□ -0.64
CCDC9-202ENST00000595659 C19orf71A6NCJ1 209 aa11.05□□□□□ -0.64
CCDC9-202ENST00000595659 PRSS1P07477 247 aa11.05□□□□□ -0.64
CCDC9-202ENST00000595659 GNG4P50150 75 aa11.05□□□□□ -0.64
CCDC9-202ENST00000595659 PKIAP61925 76 aa11.05□□□□□ -0.64
CCDC9-202ENST00000595659 MIAQ16674 131 aa11.05□□□□□ -0.64
CCDC9-202ENST00000595659 TMEM97Q5BJF2 176 aa11.05□□□□□ -0.64
CCDC9-202ENST00000595659 RAB5CP51148 216 aa11.04□□□□□ -0.64
CCDC9-202ENST00000595659 NKX2-5P52952 324 aaPredicted RBP11.04□□□□□ -0.64
CCDC9-202ENST00000595659 RPS20P60866 119 aaKnown RBP11.04□□□□□ -0.64
CCDC9-202ENST00000595659 MED9Q9NWA0 146 aa11.04□□□□□ -0.64
CCDC9-202ENST00000595659 TRBV20OR9-2A0A075B6H5 130 aa11.03□□□□□ -0.64
CCDC9-202ENST00000595659 IGLV10-54A0A075B6I4 117 aa11.03□□□□□ -0.64
CCDC9-202ENST00000595659 IGHV1-24A0A0C4DH33 117 aa11.03□□□□□ -0.64
CCDC9-202ENST00000595659 TEX46H3BTG2 121 aa11.03□□□□□ -0.64
CCDC9-202ENST00000595659 P01737 135 aa11.03□□□□□ -0.64
CCDC9-202ENST00000595659 SULT1A2P50226 295 aa11.03□□□□□ -0.64
CCDC9-202ENST00000595659 CACNG7P62955 275 aa11.03□□□□□ -0.64
CCDC9-202ENST00000595659 MEF2BQ02080 365 aaPredicted RBP11.03□□□□□ -0.64
CCDC9-202ENST00000595659 IQCJQ1A5X6 159 aa11.03□□□□□ -0.64
CCDC9-202ENST00000595659 EIF5AL1Q6IS14 154 aaKnown RBP11.03□□□□□ -0.64
CCDC9-202ENST00000595659 KRTAP26-1Q6PEX3 210 aa11.03□□□□□ -0.64
CCDC9-202ENST00000595659 LYZL1Q6UWQ5 148 aa11.03□□□□□ -0.64
CCDC9-202ENST00000595659 PRR34Q9NV39 138 aa11.03□□□□□ -0.64
CCDC9-202ENST00000595659 IFNA1P01562 189 aa11.02□□□□□ -0.65
CCDC9-202ENST00000595659 KRTAP10-4P60372 401 aaPredicted RBP11.02□□□□□ -0.65
CCDC9-202ENST00000595659 KRTAP29-1A8MX34 341 aaPredicted RBP11.01□□□□□ -0.65
CCDC9-202ENST00000595659 H7C1H1 209 aa11.01□□□□□ -0.65
CCDC9-202ENST00000595659 PDE6DO43924 150 aa11.01□□□□□ -0.65
CCDC9-202ENST00000595659 NTF3P20783 257 aa11.01□□□□□ -0.65
CCDC9-202ENST00000595659 XKRY2A2RUG3 117 aa11□□□□□ -0.65
CCDC9-202ENST00000595659 F2Z2F3 143 aa11□□□□□ -0.65
CCDC9-202ENST00000595659 BCL2P10415 239 aa11□□□□□ -0.65
CCDC9-202ENST00000595659 REG3AQ06141 175 aa11□□□□□ -0.65
CCDC9-202ENST00000595659 RASL11AQ6T310 242 aa11□□□□□ -0.65
CCDC9-202ENST00000595659 C20orf203Q8NBC4 194 aa11□□□□□ -0.65
CCDC9-202ENST00000595659 IGLV4-60A0A075B6I1 120 aa10.99□□□□□ -0.65
CCDC9-202ENST00000595659 NUDT10Q8NFP7 164 aa10.99□□□□□ -0.65
CCDC9-202ENST00000595659 NUDT11Q96G61 164 aa10.99□□□□□ -0.65
CCDC9-202ENST00000595659 TMEM243Q9BU79 118 aa10.99□□□□□ -0.65
CCDC9-202ENST00000595659 GFRA4Q9GZZ7 299 aa10.99□□□□□ -0.65
CCDC9-202ENST00000595659 LRP1Q07954 4544 aaKnown RBP10.98□□□□□ -0.65
CCDC9-202ENST00000595659 TRGC1P0CF51 173 aa10.98□□□□□ -0.65
CCDC9-202ENST00000595659 TWIST1Q15672 202 aa10.98□□□□□ -0.65
CCDC9-202ENST00000595659 SMIM12Q96EX1 92 aa10.98□□□□□ -0.65
CCDC9-202ENST00000595659 DPH3P1Q9H4G8 78 aa10.98□□□□□ -0.65
CCDC9-202ENST00000595659 NIT2Q9NQR4 276 aa10.98□□□□□ -0.65
CCDC9-202ENST00000595659 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.98□□□□□ -0.65
CCDC9-202ENST00000595659 PANO1I0J062 215 aa10.97□□□□□ -0.65
CCDC9-202ENST00000595659 DGAT2L7PQ6IED9 249 aa10.97□□□□□ -0.65
CCDC9-202ENST00000595659 C9orf62Q8N4C0 152 aa10.97□□□□□ -0.65
CCDC9-202ENST00000595659 C9orf163Q8N9P6 203 aa10.97□□□□□ -0.65
CCDC9-202ENST00000595659 RNASE7Q9H1E1 156 aaKnown RBP10.97□□□□□ -0.65
CCDC9-202ENST00000595659 TRAV26-2A0A0B4J265 109 aa10.96□□□□□ -0.65
CCDC9-202ENST00000595659 K7EN84 100 aa10.96□□□□□ -0.65
CCDC9-202ENST00000595659 SLC51BQ86UW2 128 aa10.96□□□□□ -0.65
CCDC9-202ENST00000595659 TCTE3Q8IZS6 198 aa10.96□□□□□ -0.65
CCDC9-202ENST00000595659 BIN3Q9NQY0 253 aa10.96□□□□□ -0.65
CCDC9-202ENST00000595659 hDV102S1A0JD36 115 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms