RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 IGLV2-11P01706 119 aa12.19□□□□□ -0.46
PDE4C-208ENST00000595343 ADIRFQ15847 76 aa12.19□□□□□ -0.46
PDE4C-208ENST00000595343 SMUG1Q53HV7 270 aa12.19□□□□□ -0.46
PDE4C-208ENST00000595343 CIRBP-AS1Q8TBR5 109 aa12.19□□□□□ -0.46
PDE4C-208ENST00000595343 HIST1H2BAQ96A08 127 aa12.19□□□□□ -0.46
PDE4C-208ENST00000595343 RMI2Q96E14 147 aa12.19□□□□□ -0.46
PDE4C-208ENST00000595343 DNAJC30Q96LL9 226 aa12.19□□□□□ -0.46
PDE4C-208ENST00000595343 COLCA2A8K830 154 aa12.18□□□□□ -0.46
PDE4C-208ENST00000595343 PPP1R2P9O14990 202 aa12.18□□□□□ -0.46
PDE4C-208ENST00000595343 SUMO1P63165 101 aaKnown RBP12.18□□□□□ -0.46
PDE4C-208ENST00000595343 LINC00479Q96M42 142 aa12.18□□□□□ -0.46
PDE4C-208ENST00000595343 SAMD10Q9BYL1 202 aa12.18□□□□□ -0.46
PDE4C-208ENST00000595343 FAT3Q8TDW7 4589 aa12.18□□□□□ -0.46
PDE4C-208ENST00000595343 IGKV2D-24A0A075B6R9 120 aa12.17□□□□□ -0.46
PDE4C-208ENST00000595343 S100A9P06702 114 aaKnown RBP12.17□□□□□ -0.46
PDE4C-208ENST00000595343 AKR1C3P42330 323 aa12.17□□□□□ -0.46
PDE4C-208ENST00000595343 FLI1Q01543 452 aaPredicted RBP12.17□□□□□ -0.46
PDE4C-208ENST00000595343 PIK3CD-AS1Q5SR53 167 aa12.17□□□□□ -0.46
PDE4C-208ENST00000595343 PRNTQ86SH4 94 aa12.17□□□□□ -0.46
PDE4C-208ENST00000595343 LINC01551Q86U37 167 aa12.17□□□□□ -0.46
PDE4C-208ENST00000595343 C14orf178Q8N769 122 aaPredicted RBP12.17□□□□□ -0.46
PDE4C-208ENST00000595343 YPEL4Q96NS1 127 aa12.17□□□□□ -0.46
PDE4C-208ENST00000595343 JPT2Q9H910 190 aa12.17□□□□□ -0.46
PDE4C-208ENST00000595343 URGCP-MRPS24S4R325 110 aa12.17□□□□□ -0.46
PDE4C-208ENST00000595343 S100A4P26447 101 aaKnown RBP12.16□□□□□ -0.46
PDE4C-208ENST00000595343 RPL35P42766 123 aaKnown RBP12.16□□□□□ -0.46
PDE4C-208ENST00000595343 UFSP1Q6NVU6 142 aa12.16□□□□□ -0.46
PDE4C-208ENST00000595343 NIT1Q86X76 327 aa12.16□□□□□ -0.46
PDE4C-208ENST00000595343 DERL1Q9BUN8 251 aa12.16□□□□□ -0.46
PDE4C-208ENST00000595343 EPDR1Q9UM22 224 aa12.16□□□□□ -0.46
PDE4C-208ENST00000595343 PLA2G2DQ9UNK4 145 aa12.16□□□□□ -0.46
PDE4C-208ENST00000595343 TMA7Q9Y2S6 64 aaKnown RBP12.16□□□□□ -0.46
PDE4C-208ENST00000595343 IGKV3D-20A0A0C4DH25 116 aa12.15□□□□□ -0.46
PDE4C-208ENST00000595343 ISOC2Q96AB3 205 aa12.15□□□□□ -0.46
PDE4C-208ENST00000595343 SMIM12Q96EX1 92 aa12.15□□□□□ -0.46
PDE4C-208ENST00000595343 KLK12Q9UKR0 248 aa12.15□□□□□ -0.46
PDE4C-208ENST00000595343 TRBV20OR9-2A0A075B6H5 130 aa12.14□□□□□ -0.47
PDE4C-208ENST00000595343 PEX7O00628 323 aa12.14□□□□□ -0.47
PDE4C-208ENST00000595343 IGLV2-8P01709 118 aa12.14□□□□□ -0.47
PDE4C-208ENST00000595343 SAPCD1Q5SSQ6 148 aa12.14□□□□□ -0.47
PDE4C-208ENST00000595343 BTF3L4Q96K17 158 aa12.14□□□□□ -0.47
PDE4C-208ENST00000595343 IMMP2LQ96T52 175 aa12.14□□□□□ -0.47
PDE4C-208ENST00000595343 ASIPP42127 132 aa12.13□□□□□ -0.47
PDE4C-208ENST00000595343 GNG4P50150 75 aa12.13□□□□□ -0.47
PDE4C-208ENST00000595343 UBE2WQ96B02 151 aa12.13□□□□□ -0.47
PDE4C-208ENST00000595343 TRBV24-1A0A075B6N3 115 aa12.12□□□□□ -0.47
PDE4C-208ENST00000595343 ELOBQ15370 118 aa12.12□□□□□ -0.47
PDE4C-208ENST00000595343 OCC1Q8TAD7 63 aa12.12□□□□□ -0.47
PDE4C-208ENST00000595343 IL36BQ9NZH7 164 aa12.12□□□□□ -0.47
PDE4C-208ENST00000595343 TRBV6-1A0A0K0K1D8 114 aa12.11□□□□□ -0.47
PDE4C-208ENST00000595343 FABP5P3A8MUU1 101 aa12.11□□□□□ -0.47
PDE4C-208ENST00000595343 RAB5AP20339 215 aa12.11□□□□□ -0.47
PDE4C-208ENST00000595343 S100PP25815 95 aa12.11□□□□□ -0.47
PDE4C-208ENST00000595343 CENPWQ5EE01 88 aa12.11□□□□□ -0.47
PDE4C-208ENST00000595343 DMRTA1Q5VZB9 504 aa12.11□□□□□ -0.47
PDE4C-208ENST00000595343 SFRP2Q96HF1 295 aa12.11□□□□□ -0.47
PDE4C-208ENST00000595343 A0A087WX48 190 aa12.1□□□□□ -0.47
PDE4C-208ENST00000595343 TRAV34A0A0B4J273 112 aa12.1□□□□□ -0.47
PDE4C-208ENST00000595343 H3BVH4 76 aa12.1□□□□□ -0.47
PDE4C-208ENST00000595343 RHODO00212 210 aa12.1□□□□□ -0.47
PDE4C-208ENST00000595343 FMC1Q96HJ9 113 aa12.1□□□□□ -0.47
PDE4C-208ENST00000595343 CHCHD7Q9BUK0 85 aa12.1□□□□□ -0.47
PDE4C-208ENST00000595343 TRAV9-1A0A075B6T8 112 aa12.09□□□□□ -0.47
PDE4C-208ENST00000595343 FAM74A4Q5TZK3 123 aa12.09□□□□□ -0.47
PDE4C-208ENST00000595343 KCNIP4Q6PIL6 250 aa12.09□□□□□ -0.47
PDE4C-208ENST00000595343 OR10G8Q8NGN5 311 aa12.09□□□□□ -0.47
PDE4C-208ENST00000595343 BIN3Q9NQY0 253 aa12.09□□□□□ -0.47
PDE4C-208ENST00000595343 OSTCQ9NRP0 149 aa12.09□□□□□ -0.47
PDE4C-208ENST00000595343 RPL37AP61513 92 aaKnown RBP12.08□□□□□ -0.48
PDE4C-208ENST00000595343 UBE2G1P62253 170 aa12.08□□□□□ -0.48
PDE4C-208ENST00000595343 Q0VG73 95 aa12.08□□□□□ -0.48
PDE4C-208ENST00000595343 C14orf177Q52M58 125 aa12.08□□□□□ -0.48
PDE4C-208ENST00000595343 C1orf196B1AJZ1 125 aa12.07□□□□□ -0.48
PDE4C-208ENST00000595343 K7EN84 100 aa12.07□□□□□ -0.48
PDE4C-208ENST00000595343 ARMS2P0C7Q2 107 aa12.07□□□□□ -0.48
PDE4C-208ENST00000595343 RAB5BP61020 215 aa12.07□□□□□ -0.48
PDE4C-208ENST00000595343 FAM231DQ6ZW35 169 aa12.07□□□□□ -0.48
PDE4C-208ENST00000595343 A0A087WWL8 130 aa12.06□□□□□ -0.48
PDE4C-208ENST00000595343 DNLZQ5SXM8 178 aa12.06□□□□□ -0.48
PDE4C-208ENST00000595343 BAGE2Q86Y30 109 aa12.06□□□□□ -0.48
PDE4C-208ENST00000595343 C1orf43Q9BWL3 253 aa12.06□□□□□ -0.48
PDE4C-208ENST00000595343 HNRNPA3P51991 378 aaKnown RBP12.05□□□□□ -0.48
PDE4C-208ENST00000595343 DAZAP1Q96EP5 407 aaKnown RBP12.05□□□□□ -0.48
PDE4C-208ENST00000595343 TRBV10-1A0A0K0K1A3 114 aa12.04□□□□□ -0.48
PDE4C-208ENST00000595343 GRIFINA4D1Z8 144 aa12.04□□□□□ -0.48
PDE4C-208ENST00000595343 LTAP01374 205 aa12.04□□□□□ -0.48
PDE4C-208ENST00000595343 CXCL1P09341 107 aa12.04□□□□□ -0.48
PDE4C-208ENST00000595343 CRIP1P50238 77 aa12.04□□□□□ -0.48
PDE4C-208ENST00000595343 UBE2D3P61077 147 aa12.04□□□□□ -0.48
PDE4C-208ENST00000595343 UBE2D2P62837 147 aa12.04□□□□□ -0.48
PDE4C-208ENST00000595343 RPL36AP83881 106 aaKnown RBP12.04□□□□□ -0.48
PDE4C-208ENST00000595343 ENHOQ6UWT2 76 aa12.04□□□□□ -0.48
PDE4C-208ENST00000595343 Q86TA4 180 aa12.04□□□□□ -0.48
PDE4C-208ENST00000595343 RPL36ALQ969Q0 106 aaKnown RBP12.04□□□□□ -0.48
PDE4C-208ENST00000595343 MLST8Q9BVC4 326 aa12.04□□□□□ -0.48
PDE4C-208ENST00000595343 TMEM262E9PQX1 116 aa12.03□□□□□ -0.48
PDE4C-208ENST00000595343 ZC2HC1AQ96GY0 325 aa12.03□□□□□ -0.48
PDE4C-208ENST00000595343 ZFP30Q9Y2G7 519 aa12.03□□□□□ -0.48
PDE4C-208ENST00000595343 PHLDA3Q9Y5J5 127 aa12.03□□□□□ -0.48
PDE4C-208ENST00000595343 PKHD1L1Q86WI1 4243 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms