RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 KIF25-AS1Q9Y6Z4 181 aa15.51■□□□□ 0.07
LSM4-204ENST00000594828 GZMBP10144 247 aa15.5■□□□□ 0.07
LSM4-204ENST00000594828 OR2D3Q8NGH3 330 aa15.5■□□□□ 0.07
LSM4-204ENST00000594828 SMIM12Q96EX1 92 aa15.5■□□□□ 0.07
LSM4-204ENST00000594828 AP1S3Q96PC3 154 aa15.5■□□□□ 0.07
LSM4-204ENST00000594828 TPPP3Q9BW30 176 aa15.5■□□□□ 0.07
LSM4-204ENST00000594828 MED9Q9NWA0 146 aa15.5■□□□□ 0.07
LSM4-204ENST00000594828 C19orf71A6NCJ1 209 aa15.49■□□□□ 0.07
LSM4-204ENST00000594828 RBFOX3A6NFN3 312 aa15.49■□□□□ 0.07
LSM4-204ENST00000594828 C1QBP02746 253 aa15.49■□□□□ 0.07
LSM4-204ENST00000594828 INAFM2P0DMQ5 153 aa15.49■□□□□ 0.07
LSM4-204ENST00000594828 FER1L6-AS1Q8NA97 138 aa15.49■□□□□ 0.07
LSM4-204ENST00000594828 FAM30AQ9NZY2 134 aa15.49■□□□□ 0.07
LSM4-204ENST00000594828 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.48■□□□□ 0.07
LSM4-204ENST00000594828 IGLC6P0CF74 106 aa15.48■□□□□ 0.07
LSM4-204ENST00000594828 Q0VG73 95 aa15.48■□□□□ 0.07
LSM4-204ENST00000594828 BCL2P10415 239 aa15.47■□□□□ 0.07
LSM4-204ENST00000594828 Q8N976 141 aa15.47■□□□□ 0.07
LSM4-204ENST00000594828 VAX2Q9UIW0 290 aa15.47■□□□□ 0.07
LSM4-204ENST00000594828 XKRY2A2RUG3 117 aa15.46■□□□□ 0.07
LSM4-204ENST00000594828 FAM229AH3BQW9 127 aa15.46■□□□□ 0.07
LSM4-204ENST00000594828 P01737 135 aa15.46■□□□□ 0.07
LSM4-204ENST00000594828 CACNG7P62955 275 aa15.46■□□□□ 0.07
LSM4-204ENST00000594828 TMEM97Q5BJF2 176 aa15.46■□□□□ 0.07
LSM4-204ENST00000594828 ATRAIDQ6UW56 229 aa15.46■□□□□ 0.07
LSM4-204ENST00000594828 CHCHD5Q9BSY4 110 aa15.46■□□□□ 0.07
LSM4-204ENST00000594828 BIN3Q9NQY0 253 aa15.46■□□□□ 0.07
LSM4-204ENST00000594828 Q6ZNX1 250 aa15.45■□□□□ 0.06
LSM4-204ENST00000594828 C15orf54Q8N8G6 183 aa15.45■□□□□ 0.06
LSM4-204ENST00000594828 TRBV20OR9-2A0A075B6H5 130 aa15.44■□□□□ 0.06
LSM4-204ENST00000594828 MGPP08493 103 aa15.44■□□□□ 0.06
LSM4-204ENST00000594828 PKIAP61925 76 aa15.44■□□□□ 0.06
LSM4-204ENST00000594828 MPV17L2Q567V2 206 aa15.44■□□□□ 0.06
LSM4-204ENST00000594828 ENHOQ6UWT2 76 aa15.44■□□□□ 0.06
LSM4-204ENST00000594828 FAT1Q14517 4588 aa15.44■□□□□ 0.06
LSM4-204ENST00000594828 F2Z2F3 143 aa15.43■□□□□ 0.06
LSM4-204ENST00000594828 CRPP02741 224 aa15.43■□□□□ 0.06
LSM4-204ENST00000594828 ANGP03950 147 aaKnown RBP15.43■□□□□ 0.06
LSM4-204ENST00000594828 TAGLN2P37802 199 aaKnown RBP15.43■□□□□ 0.06
LSM4-204ENST00000594828 NTM-AS1Q6ZSK4 140 aa15.43■□□□□ 0.06
LSM4-204ENST00000594828 C1orf43Q9BWL3 253 aa15.43■□□□□ 0.06
LSM4-204ENST00000594828 H7C1H1 209 aa15.42■□□□□ 0.06
LSM4-204ENST00000594828 M0QY20 66 aa15.42■□□□□ 0.06
LSM4-204ENST00000594828 LYZL1Q6UWQ5 148 aa15.41■□□□□ 0.06
LSM4-204ENST00000594828 SUMO4Q6EEV6 95 aa15.4■□□□□ 0.06
LSM4-204ENST00000594828 Q6ZSA8 131 aa15.4■□□□□ 0.06
LSM4-204ENST00000594828 NUDT10Q8NFP7 164 aa15.4■□□□□ 0.06
LSM4-204ENST00000594828 NUDT11Q96G61 164 aa15.4■□□□□ 0.06
LSM4-204ENST00000594828 TRBV25-1A0A075B6N4 114 aa15.39■□□□□ 0.05
LSM4-204ENST00000594828 TRGC1P0CF51 173 aa15.39■□□□□ 0.05
LSM4-204ENST00000594828 LINC01620Q4KN68 170 aa15.39■□□□□ 0.05
LSM4-204ENST00000594828 AKAP14Q86UN6 197 aa15.39■□□□□ 0.05
LSM4-204ENST00000594828 C9orf62Q8N4C0 152 aa15.39■□□□□ 0.05
LSM4-204ENST00000594828 DNAH8Q96JB1 4490 aa15.38■□□□□ 0.05
LSM4-204ENST00000594828 VPS13BQ7Z7G8 4022 aa15.38■□□□□ 0.05
LSM4-204ENST00000594828 NTF3P20783 257 aa15.38■□□□□ 0.05
LSM4-204ENST00000594828 GAGE6Q13070 117 aa15.38■□□□□ 0.05
LSM4-204ENST00000594828 MIAQ16674 131 aa15.37■□□□□ 0.05
LSM4-204ENST00000594828 IGHV1-24A0A0C4DH33 117 aa15.36■□□□□ 0.05
LSM4-204ENST00000594828 RBX1P62877 108 aa15.36■□□□□ 0.05
LSM4-204ENST00000594828 IQCJQ1A5X6 159 aa15.36■□□□□ 0.05
LSM4-204ENST00000594828 C14orf177Q52M58 125 aa15.36■□□□□ 0.05
LSM4-204ENST00000594828 WDR73Q6P4I2 378 aa15.36■□□□□ 0.05
LSM4-204ENST00000594828 RASL11AQ6T310 242 aa15.36■□□□□ 0.05
LSM4-204ENST00000594828 OCC1Q8TAD7 63 aa15.36■□□□□ 0.05
LSM4-204ENST00000594828 DPH3P1Q9H4G8 78 aa15.36■□□□□ 0.05
LSM4-204ENST00000594828 NKX2-5P52952 324 aaPredicted RBP15.35■□□□□ 0.05
LSM4-204ENST00000594828 hCG_2014768A0A024R1R8 64 aa15.34■□□□□ 0.05
LSM4-204ENST00000594828 CTRLP40313 264 aa15.34■□□□□ 0.05
LSM4-204ENST00000594828 BLOC1S1P78537 153 aa15.34■□□□□ 0.05
LSM4-204ENST00000594828 LINC00269Q8N2A0 174 aa15.34■□□□□ 0.05
LSM4-204ENST00000594828 RNASE7Q9H1E1 156 aaKnown RBP15.34■□□□□ 0.05
LSM4-204ENST00000594828 RPP21Q9H633 154 aaKnown RBP15.34■□□□□ 0.05
LSM4-204ENST00000594828 NIT2Q9NQR4 276 aa15.34■□□□□ 0.05
LSM4-204ENST00000594828 PRR34Q9NV39 138 aa15.34■□□□□ 0.05
LSM4-204ENST00000594828 K7EN84 100 aa15.33■□□□□ 0.04
LSM4-204ENST00000594828 TWIST1Q15672 202 aa15.33■□□□□ 0.04
LSM4-204ENST00000594828 ALKAL2Q6UX46 152 aa15.33■□□□□ 0.04
LSM4-204ENST00000594828 HLA-DQA1P01909 254 aa15.32■□□□□ 0.04
LSM4-204ENST00000594828 CLPSL2Q6UWE3 100 aa15.32■□□□□ 0.04
LSM4-204ENST00000594828 CNFNQ9BYD5 112 aa15.31■□□□□ 0.04
LSM4-204ENST00000594828 USP17L23D6RBM5 183 aa15.3■□□□□ 0.04
LSM4-204ENST00000594828 TMEM250H0YL14 139 aa15.3■□□□□ 0.04
LSM4-204ENST00000594828 TMEM243Q9BU79 118 aa15.3■□□□□ 0.04
LSM4-204ENST00000594828 PLA2G1BP04054 148 aaKnown RBP15.29■□□□□ 0.04
LSM4-204ENST00000594828 SCXQ7RTU7 201 aa15.29■□□□□ 0.04
LSM4-204ENST00000594828 LINC00528Q8N1L1 170 aa15.29■□□□□ 0.04
LSM4-204ENST00000594828 PGLYRP4Q96LB8 373 aa15.29■□□□□ 0.04
LSM4-204ENST00000594828 REG3AQ06141 175 aa15.28■□□□□ 0.04
LSM4-204ENST00000594828 LYPD6BQ8NI32 183 aa15.28■□□□□ 0.04
LSM4-204ENST00000594828 A0A1B0GUV1 79 aa15.27■□□□□ 0.04
LSM4-204ENST00000594828 DEFB104AQ8WTQ1 72 aa15.27■□□□□ 0.04
LSM4-204ENST00000594828 GTSF1Q8WW33 167 aa15.27■□□□□ 0.04
LSM4-204ENST00000594828 CHAC1Q9BUX1 264 aa15.27■□□□□ 0.04
LSM4-204ENST00000594828 SRRM2Q9UQ35 2752 aaKnown RBP15.26■□□□□ 0.03
LSM4-204ENST00000594828 GATCO43716 136 aaKnown RBP15.26■□□□□ 0.03
LSM4-204ENST00000594828 KRTAP26-1Q6PEX3 210 aa15.26■□□□□ 0.03
LSM4-204ENST00000594828 C20orf203Q8NBC4 194 aa15.26■□□□□ 0.03
LSM4-204ENST00000594828 PRSS1P07477 247 aa15.25■□□□□ 0.03
LSM4-204ENST00000594828 CEBPGP53567 150 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms