RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 OVOL2Q9BRP0 275 aa9.43□□□□□ -0.9
LIG1-207ENST00000594759 C11orf68Q9H3H3 251 aaKnown RBP9.43□□□□□ -0.9
LIG1-207ENST00000594759 TINCRA0A1B0GVN0 87 aa9.42□□□□□ -0.9
LIG1-207ENST00000594759 LHBP01229 141 aa9.42□□□□□ -0.9
LIG1-207ENST00000594759 RUSC1-AS1Q66K80 236 aa9.42□□□□□ -0.9
LIG1-207ENST00000594759 HIVEP3Q5T1R4 2406 aa9.42□□□□□ -0.9
LIG1-207ENST00000594759 EPG5Q9HCE0 2579 aa9.42□□□□□ -0.9
LIG1-207ENST00000594759 IGFL3Q6UXB1 125 aa9.42□□□□□ -0.9
LIG1-207ENST00000594759 NRACQ8N912 160 aa9.42□□□□□ -0.9
LIG1-207ENST00000594759 TIMM17AQ99595 171 aa9.42□□□□□ -0.9
LIG1-207ENST00000594759 MSRB2Q9Y3D2 182 aa9.42□□□□□ -0.9
LIG1-207ENST00000594759 ADAMTS20P59510 1910 aa9.42□□□□□ -0.9
LIG1-207ENST00000594759 IGLV1-44P01699 117 aa9.41□□□□□ -0.9
LIG1-207ENST00000594759 MSMPQ1L6U9 139 aa9.41□□□□□ -0.9
LIG1-207ENST00000594759 BRK1Q8WUW1 75 aa9.41□□□□□ -0.9
LIG1-207ENST00000594759 GNRH2O43555 120 aa9.41□□□□□ -0.9
LIG1-207ENST00000594759 ZNF672Q499Z4 452 aaPredicted RBP9.41□□□□□ -0.9
LIG1-207ENST00000594759 TMEM263Q8WUH6 116 aaKnown RBP9.41□□□□□ -0.9
LIG1-207ENST00000594759 E7EQL1 145 aa9.41□□□□□ -0.9
LIG1-207ENST00000594759 LY6EQ16553 131 aa9.41□□□□□ -0.9
LIG1-207ENST00000594759 DAND5Q8N907 189 aa9.41□□□□□ -0.9
LIG1-207ENST00000594759 I3L3M4 83 aa9.41□□□□□ -0.9
LIG1-207ENST00000594759 FSTL3O95633 263 aa9.41□□□□□ -0.9
LIG1-207ENST00000594759 DAZ2Q13117 558 aaKnown RBP9.41□□□□□ -0.9
LIG1-207ENST00000594759 DAZ4Q86SG3 579 aaKnown RBP9.41□□□□□ -0.9
LIG1-207ENST00000594759 DAZ1Q9NQZ3 744 aaKnown RBP9.41□□□□□ -0.9
LIG1-207ENST00000594759 DAZ3Q9NR90 486 aaKnown RBP9.41□□□□□ -0.9
LIG1-207ENST00000594759 V9GYY9 64 aa9.41□□□□□ -0.9
LIG1-207ENST00000594759 COL6A3P12111 3177 aa9.4□□□□□ -0.9
LIG1-207ENST00000594759 A0A0J9YXY3 114 aa9.4□□□□□ -0.9
LIG1-207ENST00000594759 CELSR3Q9NYQ7 3312 aa9.4□□□□□ -0.9
LIG1-207ENST00000594759 TNRC6BQ9UPQ9 1833 aaKnown RBP9.4□□□□□ -0.9
LIG1-207ENST00000594759 IGKV3OR2-268A0A0C4DH90 116 aa9.4□□□□□ -0.9
LIG1-207ENST00000594759 KNCNA6PVL3 124 aa9.4□□□□□ -0.9
LIG1-207ENST00000594759 TEX22C9J3V5 150 aa9.4□□□□□ -0.9
LIG1-207ENST00000594759 GRNP28799 593 aaKnown RBP9.4□□□□□ -0.9
LIG1-207ENST00000594759 RNASE13Q5GAN3 156 aaKnown RBP9.4□□□□□ -0.9
LIG1-207ENST00000594759 SERP2Q8N6R1 65 aa9.4□□□□□ -0.91
LIG1-207ENST00000594759 IGHV3-73A0A0B4J1V6 119 aa9.39□□□□□ -0.91
LIG1-207ENST00000594759 A0A0U1RQV1 116 aa9.39□□□□□ -0.91
LIG1-207ENST00000594759 LOXP28300 417 aaPredicted RBP9.39□□□□□ -0.91
LIG1-207ENST00000594759 OPRPNQ99935 248 aaPredicted RBP9.39□□□□□ -0.91
LIG1-207ENST00000594759 HOXD3P31249 432 aaPredicted RBP9.39□□□□□ -0.91
LIG1-207ENST00000594759 SBSPONQ8IVN8 264 aa9.39□□□□□ -0.91
LIG1-207ENST00000594759 PTPRBP23467 1997 aa9.39□□□□□ -0.91
LIG1-207ENST00000594759 PAX8Q06710 450 aa9.39□□□□□ -0.91
LIG1-207ENST00000594759 LINC01587Q99440 93 aa9.39□□□□□ -0.91
LIG1-207ENST00000594759 DSCAMO60469 2012 aa9.39□□□□□ -0.91
LIG1-207ENST00000594759 IGHV3-30-3P0DP02 117 aa9.38□□□□□ -0.91
LIG1-207ENST00000594759 GNLYP22749 145 aa9.38□□□□□ -0.91
LIG1-207ENST00000594759 NSUN5P1Q3KNT7 163 aa9.38□□□□□ -0.91
LIG1-207ENST00000594759 SEM1Q6ZVN7 128 aa9.38□□□□□ -0.91
LIG1-207ENST00000594759 BRI3O95415 125 aa9.38□□□□□ -0.91
LIG1-207ENST00000594759 RPL18AQ02543 176 aaKnown RBP9.38□□□□□ -0.91
LIG1-207ENST00000594759 C20orf197Q8N268 126 aa9.38□□□□□ -0.91
LIG1-207ENST00000594759 UBL5Q9BZL1 73 aa9.38□□□□□ -0.91
LIG1-207ENST00000594759 NDUFC2O95298 119 aa9.38□□□□□ -0.91
LIG1-207ENST00000594759 LINC00158P58513 81 aa9.38□□□□□ -0.91
LIG1-207ENST00000594759 POLQO75417 2590 aa9.38□□□□□ -0.91
LIG1-207ENST00000594759 TRBV7-7A0A0K0K1E9 115 aa9.37□□□□□ -0.91
LIG1-207ENST00000594759 LST1O00453 97 aa9.37□□□□□ -0.91
LIG1-207ENST00000594759 IGHG2P01859 326 aa9.37□□□□□ -0.91
LIG1-207ENST00000594759 IGFL2Q6UWQ7 119 aa9.37□□□□□ -0.91
LIG1-207ENST00000594759 CTSZQ9UBR2 303 aa9.37□□□□□ -0.91
LIG1-207ENST00000594759 HOXB4P17483 251 aaPredicted RBP9.37□□□□□ -0.91
LIG1-207ENST00000594759 CNFNQ9BYD5 112 aa9.37□□□□□ -0.91
LIG1-207ENST00000594759 SORL1Q92673 2214 aa9.37□□□□□ -0.91
LIG1-207ENST00000594759 CEMP1Q6PRD7 247 aaPredicted RBP9.37□□□□□ -0.91
LIG1-207ENST00000594759 IGLV3-9A0A075B6K5 115 aa9.37□□□□□ -0.91
LIG1-207ENST00000594759 PAX4O43316 350 aa9.37□□□□□ -0.91
LIG1-207ENST00000594759 GHRHP01286 108 aa9.37□□□□□ -0.91
LIG1-207ENST00000594759 COL5A1P20908 1838 aaPredicted RBP9.37□□□□□ -0.91
LIG1-207ENST00000594759 MGAQ8IWI9 3026 aa9.36□□□□□ -0.91
LIG1-207ENST00000594759 SUMO4Q6EEV6 95 aa9.36□□□□□ -0.91
LIG1-207ENST00000594759 UBE2L6O14933 153 aa9.36□□□□□ -0.91
LIG1-207ENST00000594759 CXCL5P42830 114 aa9.36□□□□□ -0.91
LIG1-207ENST00000594759 IGHV3-11P01762 117 aa9.35□□□□□ -0.91
LIG1-207ENST00000594759 PFN2P35080 140 aa9.35□□□□□ -0.91
LIG1-207ENST00000594759 SNRPD3P62318 126 aaKnown RBP9.35□□□□□ -0.91
LIG1-207ENST00000594759 RPS28P62857 69 aaKnown RBP9.35□□□□□ -0.91
LIG1-207ENST00000594759 WFDC11Q8NEX6 87 aa9.35□□□□□ -0.91
LIG1-207ENST00000594759 IGLV2-18A0A075B6J9 118 aa9.35□□□□□ -0.91
LIG1-207ENST00000594759 FAM236DA0A1B0GTK5 79 aa9.35□□□□□ -0.91
LIG1-207ENST00000594759 CTSGP08311 255 aa9.35□□□□□ -0.91
LIG1-207ENST00000594759 FAM236CP0DP71 79 aa9.35□□□□□ -0.91
LIG1-207ENST00000594759 MIAQ16674 131 aa9.35□□□□□ -0.91
LIG1-207ENST00000594759 LENEPQ9Y5L5 61 aa9.34□□□□□ -0.91
LIG1-207ENST00000594759 FRYLO94915 3013 aa9.34□□□□□ -0.91
LIG1-207ENST00000594759 HAMPP81172 84 aa9.34□□□□□ -0.91
LIG1-207ENST00000594759 Q9H8V8 135 aa9.34□□□□□ -0.91
LIG1-207ENST00000594759 JPT2Q9H910 190 aa9.34□□□□□ -0.91
LIG1-207ENST00000594759 Q9HAA7 133 aa9.34□□□□□ -0.91
LIG1-207ENST00000594759 USP17L23D6RBM5 183 aa9.34□□□□□ -0.91
LIG1-207ENST00000594759 COX7A2LO14548 114 aa9.34□□□□□ -0.91
LIG1-207ENST00000594759 BUB3O43684 328 aa9.34□□□□□ -0.91
LIG1-207ENST00000594759 CCL19Q99731 98 aa9.34□□□□□ -0.91
LIG1-207ENST00000594759 FASNP49327 2511 aaKnown RBP9.34□□□□□ -0.91
LIG1-207ENST00000594759 TRBV7-1A0A0A6YYK4 115 aa9.33□□□□□ -0.92
LIG1-207ENST00000594759 C4orf26Q17RF5 130 aa9.33□□□□□ -0.92
LIG1-207ENST00000594759 TRAV23DV6A0A075B6W5 121 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms