RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 KRTAP10-2P60368 255 aa13.49□□□□□ -0.25
COPE-204ENST00000593827 DAZ4Q86SG3 579 aaKnown RBP13.49□□□□□ -0.25
COPE-204ENST00000593827 NEXN-AS1Q8NBZ9 246 aa13.49□□□□□ -0.25
COPE-204ENST00000593827 NUDT10Q8NFP7 164 aa13.49□□□□□ -0.25
COPE-204ENST00000593827 RMI2Q96E14 147 aa13.49□□□□□ -0.25
COPE-204ENST00000593827 NUDT11Q96G61 164 aa13.49□□□□□ -0.25
COPE-204ENST00000593827 DAZ3Q9NR90 486 aaKnown RBP13.49□□□□□ -0.25
COPE-204ENST00000593827 OCC1Q8TAD7 63 aa13.48□□□□□ -0.25
COPE-204ENST00000593827 MGPP08493 103 aa13.47□□□□□ -0.25
COPE-204ENST00000593827 CEBPGP53567 150 aa13.47□□□□□ -0.25
COPE-204ENST00000593827 LYZL1Q6UWQ5 148 aa13.47□□□□□ -0.25
COPE-204ENST00000593827 NIT1Q86X76 327 aa13.47□□□□□ -0.25
COPE-204ENST00000593827 DNAJC30Q96LL9 226 aa13.47□□□□□ -0.25
COPE-204ENST00000593827 KIF25-AS1Q9Y6Z4 181 aa13.47□□□□□ -0.25
COPE-204ENST00000593827 TRBV6-8A0A0A6YYG3 113 aa13.46□□□□□ -0.25
COPE-204ENST00000593827 CTRLP40313 264 aa13.45□□□□□ -0.26
COPE-204ENST00000593827 SMIM15Q7Z3B0 74 aa13.45□□□□□ -0.26
COPE-204ENST00000593827 FAM210AQ96ND0 272 aa13.45□□□□□ -0.26
COPE-204ENST00000593827 RNASE7Q9H1E1 156 aaKnown RBP13.45□□□□□ -0.26
COPE-204ENST00000593827 DPH3P1Q9H4G8 78 aa13.45□□□□□ -0.26
COPE-204ENST00000593827 TMEM262E9PQX1 116 aa13.44□□□□□ -0.26
COPE-204ENST00000593827 K7EN84 100 aa13.44□□□□□ -0.26
COPE-204ENST00000593827 GATCO43716 136 aaKnown RBP13.44□□□□□ -0.26
COPE-204ENST00000593827 NTF3P20783 257 aa13.44□□□□□ -0.26
COPE-204ENST00000593827 FAM231DQ6ZW35 169 aa13.44□□□□□ -0.26
COPE-204ENST00000593827 NTN5Q8WTR8 489 aaPredicted RBP13.44□□□□□ -0.26
COPE-204ENST00000593827 SMIM7Q9BQ49 75 aa13.44□□□□□ -0.26
COPE-204ENST00000593827 A8MWL6 223 aa13.43□□□□□ -0.26
COPE-204ENST00000593827 TWIST1Q15672 202 aa13.43□□□□□ -0.26
COPE-204ENST00000593827 CNFNQ9BYD5 112 aa13.43□□□□□ -0.26
COPE-204ENST00000593827 M0QY20 66 aa13.42□□□□□ -0.26
COPE-204ENST00000593827 Q0VG73 95 aa13.42□□□□□ -0.26
COPE-204ENST00000593827 CT83Q5H943 113 aa13.42□□□□□ -0.26
COPE-204ENST00000593827 CHCHD5Q9BSY4 110 aa13.42□□□□□ -0.26
COPE-204ENST00000593827 RASL11AQ6T310 242 aa13.41□□□□□ -0.26
COPE-204ENST00000593827 BORCS7Q96B45 105 aa13.41□□□□□ -0.26
COPE-204ENST00000593827 KLK12Q9UKR0 248 aa13.41□□□□□ -0.26
COPE-204ENST00000593827 TRBV25-1A0A075B6N4 114 aa13.4□□□□□ -0.26
COPE-204ENST00000593827 ZNF727A8MUV8 499 aa13.4□□□□□ -0.26
COPE-204ENST00000593827 SUMO4Q6EEV6 95 aa13.4□□□□□ -0.26
COPE-204ENST00000593827 Q8N3U1 123 aa13.4□□□□□ -0.26
COPE-204ENST00000593827 FRZBQ92765 325 aa13.4□□□□□ -0.26
COPE-204ENST00000593827 LRCOL1A6NCL2 159 aa13.39□□□□□ -0.27
COPE-204ENST00000593827 CRPP02741 224 aa13.39□□□□□ -0.27
COPE-204ENST00000593827 FAM74A3Q4VXF1 159 aa13.39□□□□□ -0.27
COPE-204ENST00000593827 NIT2Q9NQR4 276 aa13.39□□□□□ -0.27
COPE-204ENST00000593827 IGLV5-52A0A0A0MRZ9 124 aa13.38□□□□□ -0.27
COPE-204ENST00000593827 IGHV1-24A0A0C4DH33 117 aa13.38□□□□□ -0.27
COPE-204ENST00000593827 TEX261Q6UWH6 196 aa13.38□□□□□ -0.27
COPE-204ENST00000593827 Q8N814 137 aa13.38□□□□□ -0.27
COPE-204ENST00000593827 UBE2WQ96B02 151 aa13.38□□□□□ -0.27
COPE-204ENST00000593827 SRP19P09132 144 aaKnown RBP13.37□□□□□ -0.27
COPE-204ENST00000593827 GCSHP23434 173 aa13.37□□□□□ -0.27
COPE-204ENST00000593827 LINC01551Q86U37 167 aa13.37□□□□□ -0.27
COPE-204ENST00000593827 C15orf54Q8N8G6 183 aa13.37□□□□□ -0.27
COPE-204ENST00000593827 LRP1BQ9NZR2 4599 aa13.37□□□□□ -0.27
COPE-204ENST00000593827 IGKV2D-24A0A075B6R9 120 aa13.36□□□□□ -0.27
COPE-204ENST00000593827 FAM231BA6NCW3 169 aa13.36□□□□□ -0.27
COPE-204ENST00000593827 PEA15Q15121 130 aa13.36□□□□□ -0.27
COPE-204ENST00000593827 MAPKAPK5-AS1Q8N8E1 139 aa13.36□□□□□ -0.27
COPE-204ENST00000593827 GFRA4Q9GZZ7 299 aa13.36□□□□□ -0.27
COPE-204ENST00000593827 SMDT1Q9H4I9 107 aa13.36□□□□□ -0.27
COPE-204ENST00000593827 ANGP03950 147 aaKnown RBP13.35□□□□□ -0.27
COPE-204ENST00000593827 FOXA3P55318 350 aaPredicted RBP13.35□□□□□ -0.27
COPE-204ENST00000593827 IQCJQ1A5X6 159 aa13.35□□□□□ -0.27
COPE-204ENST00000593827 GTSF1Q8WW33 167 aa13.35□□□□□ -0.27
COPE-204ENST00000593827 PGLYRP4Q96LB8 373 aa13.35□□□□□ -0.27
COPE-204ENST00000593827 C1orf43Q9BWL3 253 aa13.35□□□□□ -0.27
COPE-204ENST00000593827 OSTCQ9NRP0 149 aa13.35□□□□□ -0.27
COPE-204ENST00000593827 ABCA13Q86UQ4 5058 aa13.34□□□□□ -0.27
COPE-204ENST00000593827 TMEM241Q24JQ0 296 aa13.34□□□□□ -0.27
COPE-204ENST00000593827 TSKUQ8WUA8 353 aa13.34□□□□□ -0.27
COPE-204ENST00000593827 MPV17L2Q567V2 206 aa13.33□□□□□ -0.28
COPE-204ENST00000593827 ATRAIDQ6UW56 229 aa13.33□□□□□ -0.28
COPE-204ENST00000593827 NTM-AS1Q6ZSK4 140 aa13.33□□□□□ -0.28
COPE-204ENST00000593827 Q8N976 141 aa13.33□□□□□ -0.28
COPE-204ENST00000593827 COTL1Q14019 142 aa13.32□□□□□ -0.28
COPE-204ENST00000593827 MIAQ16674 131 aa13.32□□□□□ -0.28
COPE-204ENST00000593827 TMEM243Q9BU79 118 aa13.32□□□□□ -0.28
COPE-204ENST00000593827 A0A1B0GUT8 65 aa13.31□□□□□ -0.28
COPE-204ENST00000593827 FUSP35637 526 aaKnown RBP eCLIP13.31□□□□□ -0.28
COPE-204ENST00000593827 C14orf177Q52M58 125 aa13.31□□□□□ -0.28
COPE-204ENST00000593827 HIGD1CA8MV81 97 aa13.3□□□□□ -0.28
COPE-204ENST00000593827 UBE2L6O14933 153 aa13.3□□□□□ -0.28
COPE-204ENST00000593827 RBX1P62877 108 aa13.3□□□□□ -0.28
COPE-204ENST00000593827 GAGE6Q13070 117 aa13.3□□□□□ -0.28
COPE-204ENST00000593827 NAT8Q9UHE5 227 aa13.3□□□□□ -0.28
COPE-204ENST00000593827 Q8N1X5 172 aa13.29□□□□□ -0.28
COPE-204ENST00000593827 GATD1Q8NB37 220 aa13.29□□□□□ -0.28
COPE-204ENST00000593827 BAALCQ8WXS3 180 aa13.29□□□□□ -0.28
COPE-204ENST00000593827 TMEM70Q9BUB7 260 aa13.29□□□□□ -0.28
COPE-204ENST00000593827 HSPG2P98160 4391 aa13.28□□□□□ -0.28
COPE-204ENST00000593827 KRTAP10-1P60331 282 aa13.28□□□□□ -0.28
COPE-204ENST00000593827 ENHOQ6UWT2 76 aa13.28□□□□□ -0.28
COPE-204ENST00000593827 DNAH5Q8TE73 4624 aa13.27□□□□□ -0.28
COPE-204ENST00000593827 A0A1B0GUV1 79 aa13.27□□□□□ -0.29
COPE-204ENST00000593827 NCR2O95944 276 aa13.27□□□□□ -0.29
COPE-204ENST00000593827 AMTP48728 403 aa13.27□□□□□ -0.29
COPE-204ENST00000593827 RIGQ13278 110 aa13.27□□□□□ -0.29
COPE-204ENST00000593827 ADIRFQ15847 76 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms