RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 SCXQ7RTU7 201 aa11.76□□□□□ -0.53
CIRBP-243ENST00000593128 TPPP3Q9BW30 176 aa11.76□□□□□ -0.53
CIRBP-243ENST00000593128 BCL2L11O43521 198 aa11.75□□□□□ -0.53
CIRBP-243ENST00000593128 HLA-DQA1P01909 254 aa11.75□□□□□ -0.53
CIRBP-243ENST00000593128 MPV17L2Q567V2 206 aa11.75□□□□□ -0.53
CIRBP-243ENST00000593128 A0A0D9SG52 128 aa11.74□□□□□ -0.53
CIRBP-243ENST00000593128 TMUB2Q71RG4 321 aa11.74□□□□□ -0.53
CIRBP-243ENST00000593128 C9orf62Q8N4C0 152 aa11.74□□□□□ -0.53
CIRBP-243ENST00000593128 OR10G8Q8NGN5 311 aa11.74□□□□□ -0.53
CIRBP-243ENST00000593128 GNG13Q9P2W3 67 aa11.74□□□□□ -0.53
CIRBP-243ENST00000593128 MGPP08493 103 aa11.73□□□□□ -0.53
CIRBP-243ENST00000593128 CXCL1P09341 107 aa11.73□□□□□ -0.53
CIRBP-243ENST00000593128 CLPSL2Q6UWE3 100 aa11.73□□□□□ -0.53
CIRBP-243ENST00000593128 ENHOQ6UWT2 76 aa11.73□□□□□ -0.53
CIRBP-243ENST00000593128 MLST8Q9BVC4 326 aa11.73□□□□□ -0.53
CIRBP-243ENST00000593128 SNAI2O43623 268 aa11.72□□□□□ -0.53
CIRBP-243ENST00000593128 RPL35P42766 123 aaKnown RBP11.72□□□□□ -0.53
CIRBP-243ENST00000593128 AP1S3Q96PC3 154 aa11.72□□□□□ -0.53
CIRBP-243ENST00000593128 OR5AL1P0C617 328 aa11.71□□□□□ -0.53
CIRBP-243ENST00000593128 GZMBP10144 247 aa11.71□□□□□ -0.53
CIRBP-243ENST00000593128 EIF5AP63241 154 aaKnown RBP11.71□□□□□ -0.53
CIRBP-243ENST00000593128 GAGE6Q13070 117 aa11.71□□□□□ -0.53
CIRBP-243ENST00000593128 C14orf177Q52M58 125 aa11.71□□□□□ -0.53
CIRBP-243ENST00000593128 ATRAIDQ6UW56 229 aa11.71□□□□□ -0.53
CIRBP-243ENST00000593128 DERL1Q9BUN8 251 aa11.71□□□□□ -0.53
CIRBP-243ENST00000593128 CHAC1Q9BUX1 264 aa11.71□□□□□ -0.53
CIRBP-243ENST00000593128 DEFB104AQ8WTQ1 72 aa11.7□□□□□ -0.54
CIRBP-243ENST00000593128 DAZAP1Q96EP5 407 aaKnown RBP11.7□□□□□ -0.54
CIRBP-243ENST00000593128 SSBP4Q9BWG4 385 aaPredicted RBP11.7□□□□□ -0.54
CIRBP-243ENST00000593128 USP17L23D6RBM5 183 aa11.69□□□□□ -0.54
CIRBP-243ENST00000593128 PKIAP61925 76 aa11.69□□□□□ -0.54
CIRBP-243ENST00000593128 CCL20P78556 96 aa11.69□□□□□ -0.54
CIRBP-243ENST00000593128 CENPWQ5EE01 88 aa11.69□□□□□ -0.54
CIRBP-243ENST00000593128 CIRBP-AS1Q8TBR5 109 aa11.69□□□□□ -0.54
CIRBP-243ENST00000593128 MANBALQ9NQG1 85 aa11.69□□□□□ -0.54
CIRBP-243ENST00000593128 NTM-AS1Q6ZSK4 140 aa11.68□□□□□ -0.54
CIRBP-243ENST00000593128 OR2D3Q8NGH3 330 aa11.68□□□□□ -0.54
CIRBP-243ENST00000593128 TRBV25-1A0A075B6N4 114 aa11.67□□□□□ -0.54
CIRBP-243ENST00000593128 IGLV2-8P01709 118 aa11.67□□□□□ -0.54
CIRBP-243ENST00000593128 RBX1P62877 108 aa11.67□□□□□ -0.54
CIRBP-243ENST00000593128 MIAQ16674 131 aa11.67□□□□□ -0.54
CIRBP-243ENST00000593128 TMEM97Q5BJF2 176 aa11.67□□□□□ -0.54
CIRBP-243ENST00000593128 LINC00269Q8N2A0 174 aa11.67□□□□□ -0.54
CIRBP-243ENST00000593128 FER1L6-AS1Q8NA97 138 aa11.67□□□□□ -0.54
CIRBP-243ENST00000593128 RAB19A4D1S5 217 aa11.66□□□□□ -0.54
CIRBP-243ENST00000593128 KIF25-AS1Q9Y6Z4 181 aa11.66□□□□□ -0.54
CIRBP-243ENST00000593128 IGHV1-24A0A0C4DH33 117 aa11.65□□□□□ -0.54
CIRBP-243ENST00000593128 SUMO4Q6EEV6 95 aa11.65□□□□□ -0.54
CIRBP-243ENST00000593128 IGLV10-54A0A075B6I4 117 aa11.64□□□□□ -0.55
CIRBP-243ENST00000593128 TEX46H3BTG2 121 aa11.64□□□□□ -0.55
CIRBP-243ENST00000593128 GNG4P50150 75 aa11.64□□□□□ -0.55
CIRBP-243ENST00000593128 RPS20P60866 119 aaKnown RBP11.64□□□□□ -0.55
CIRBP-243ENST00000593128 SLC51BQ86UW2 128 aa11.64□□□□□ -0.55
CIRBP-243ENST00000593128 C11orf52Q96A22 123 aa11.64□□□□□ -0.55
CIRBP-243ENST00000593128 VAX2Q9UIW0 290 aa11.64□□□□□ -0.55
CIRBP-243ENST00000593128 KRTAP29-1A8MX34 341 aaPredicted RBP11.63□□□□□ -0.55
CIRBP-243ENST00000593128 H7C1H1 209 aa11.63□□□□□ -0.55
CIRBP-243ENST00000593128 PRSS1P07477 247 aa11.63□□□□□ -0.55
CIRBP-243ENST00000593128 CACNG7P62955 275 aa11.63□□□□□ -0.55
CIRBP-243ENST00000593128 M0QY20 66 aa11.62□□□□□ -0.55
CIRBP-243ENST00000593128 P01737 135 aa11.62□□□□□ -0.55
CIRBP-243ENST00000593128 IGLC6P0CF74 106 aa11.62□□□□□ -0.55
CIRBP-243ENST00000593128 MED9Q9NWA0 146 aa11.62□□□□□ -0.55
CIRBP-243ENST00000593128 XKRY2A2RUG3 117 aa11.61□□□□□ -0.55
CIRBP-243ENST00000593128 IFNA1P01562 189 aa11.61□□□□□ -0.55
CIRBP-243ENST00000593128 RAB5CP51148 216 aa11.61□□□□□ -0.55
CIRBP-243ENST00000593128 REG3AQ06141 175 aa11.61□□□□□ -0.55
CIRBP-243ENST00000593128 IQCJQ1A5X6 159 aa11.61□□□□□ -0.55
CIRBP-243ENST00000593128 EIF5AL1Q6IS14 154 aaKnown RBP11.61□□□□□ -0.55
CIRBP-243ENST00000593128 PRR34Q9NV39 138 aa11.61□□□□□ -0.55
CIRBP-243ENST00000593128 C19orf71A6NCJ1 209 aa11.6□□□□□ -0.55
CIRBP-243ENST00000593128 RPL37AP61513 92 aaKnown RBP11.6□□□□□ -0.55
CIRBP-243ENST00000593128 MEF2BQ02080 365 aaPredicted RBP11.6□□□□□ -0.55
CIRBP-243ENST00000593128 LYZL1Q6UWQ5 148 aa11.6□□□□□ -0.55
CIRBP-243ENST00000593128 TMEM243Q9BU79 118 aa11.6□□□□□ -0.55
CIRBP-243ENST00000593128 TRAV1-1A0A0B4J248 108 aa11.59□□□□□ -0.55
CIRBP-243ENST00000593128 UBE2L6O14933 153 aa11.59□□□□□ -0.55
CIRBP-243ENST00000593128 PDE6DO43924 150 aa11.59□□□□□ -0.55
CIRBP-243ENST00000593128 TRGC1P0CF51 173 aa11.59□□□□□ -0.55
CIRBP-243ENST00000593128 RASL11AQ6T310 242 aa11.59□□□□□ -0.55
CIRBP-243ENST00000593128 hDV102S1A0JD36 115 aa11.58□□□□□ -0.56
CIRBP-243ENST00000593128 F2Z2F3 143 aa11.58□□□□□ -0.56
CIRBP-243ENST00000593128 DGAT2L7PQ6IED9 249 aa11.58□□□□□ -0.56
CIRBP-243ENST00000593128 DPH3P1Q9H4G8 78 aa11.58□□□□□ -0.56
CIRBP-243ENST00000593128 NTF3P20783 257 aa11.57□□□□□ -0.56
CIRBP-243ENST00000593128 SULT1A2P50226 295 aa11.57□□□□□ -0.56
CIRBP-243ENST00000593128 KRTAP10-4P60372 401 aaPredicted RBP11.57□□□□□ -0.56
CIRBP-243ENST00000593128 TWIST1Q15672 202 aa11.57□□□□□ -0.56
CIRBP-243ENST00000593128 C20orf203Q8NBC4 194 aa11.57□□□□□ -0.56
CIRBP-243ENST00000593128 BIN3Q9NQY0 253 aa11.57□□□□□ -0.56
CIRBP-243ENST00000593128 IGLV4-60A0A075B6I1 120 aa11.56□□□□□ -0.56
CIRBP-243ENST00000593128 BCL2P10415 239 aa11.56□□□□□ -0.56
CIRBP-243ENST00000593128 KRTAP26-1Q6PEX3 210 aa11.56□□□□□ -0.56
CIRBP-243ENST00000593128 C9orf163Q8N9P6 203 aa11.56□□□□□ -0.56
CIRBP-243ENST00000593128 SMIM12Q96EX1 92 aa11.56□□□□□ -0.56
CIRBP-243ENST00000593128 NIT2Q9NQR4 276 aa11.56□□□□□ -0.56
CIRBP-243ENST00000593128 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.56□□□□□ -0.56
CIRBP-243ENST00000593128 TRBV20OR9-2A0A075B6H5 130 aa11.55□□□□□ -0.56
CIRBP-243ENST00000593128 IGKV3OR2-268A0A0C4DH90 116 aa11.55□□□□□ -0.56
CIRBP-243ENST00000593128 AMTP48728 403 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms