RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 SIVA1O15304 175 aa10.23□□□□□ -0.77
DDX39A-221ENST00000593026 LELP1Q5T871 98 aa10.23□□□□□ -0.77
DDX39A-221ENST00000593026 WFDC10BQ8IUB3 73 aa10.23□□□□□ -0.77
DDX39A-221ENST00000593026 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.23□□□□□ -0.77
DDX39A-221ENST00000593026 DNAJC30Q96LL9 226 aa10.23□□□□□ -0.77
DDX39A-221ENST00000593026 CARHSP1Q9Y2V2 147 aaKnown RBP10.23□□□□□ -0.77
DDX39A-221ENST00000593026 TNFRSF18Q9Y5U5 241 aa10.23□□□□□ -0.77
DDX39A-221ENST00000593026 A0A087WWC5 75 aa10.22□□□□□ -0.77
DDX39A-221ENST00000593026 TRAV8-6A0A0B4J262 113 aa10.22□□□□□ -0.77
DDX39A-221ENST00000593026 TRAV26-2A0A0B4J265 109 aa10.22□□□□□ -0.77
DDX39A-221ENST00000593026 NBDYA0A0U1RRE5 68 aa10.22□□□□□ -0.77
DDX39A-221ENST00000593026 OR10J3Q5JRS4 329 aa10.22□□□□□ -0.77
DDX39A-221ENST00000593026 MRPL54Q6P161 138 aaKnown RBP10.22□□□□□ -0.77
DDX39A-221ENST00000593026 KMT2AQ03164 3969 aa10.21□□□□□ -0.77
DDX39A-221ENST00000593026 S100A8P05109 93 aa10.21□□□□□ -0.77
DDX39A-221ENST00000593026 CAMPP49913 170 aa10.21□□□□□ -0.77
DDX39A-221ENST00000593026 HBBP68871 147 aa10.21□□□□□ -0.77
DDX39A-221ENST00000593026 TTC32Q5I0X7 151 aa10.21□□□□□ -0.77
DDX39A-221ENST00000593026 Q6ZR54 194 aa10.21□□□□□ -0.77
DDX39A-221ENST00000593026 AMN1Q8IY45 258 aa10.21□□□□□ -0.77
DDX39A-221ENST00000593026 GATD1Q8NB37 220 aa10.21□□□□□ -0.77
DDX39A-221ENST00000593026 CTDSP1Q9GZU7 261 aa10.21□□□□□ -0.77
DDX39A-221ENST00000593026 NIT2Q9NQR4 276 aa10.21□□□□□ -0.77
DDX39A-221ENST00000593026 IGHV3-38A0A0C4DH36 116 aa10.2□□□□□ -0.78
DDX39A-221ENST00000593026 ATP5L2Q7Z4Y8 100 aa10.2□□□□□ -0.78
DDX39A-221ENST00000593026 DAZ4Q86SG3 579 aaKnown RBP10.2□□□□□ -0.78
DDX39A-221ENST00000593026 FRZBQ92765 325 aa10.2□□□□□ -0.78
DDX39A-221ENST00000593026 DAZ3Q9NR90 486 aaKnown RBP10.2□□□□□ -0.78
DDX39A-221ENST00000593026 A0A1B0GXF2 115 aa10.19□□□□□ -0.78
DDX39A-221ENST00000593026 RAB4AP20338 218 aa10.19□□□□□ -0.78
DDX39A-221ENST00000593026 NDUFA5Q16718 116 aa10.19□□□□□ -0.78
DDX39A-221ENST00000593026 RNF185Q96GF1 192 aa10.19□□□□□ -0.78
DDX39A-221ENST00000593026 APOC3P02656 99 aa10.18□□□□□ -0.78
DDX39A-221ENST00000593026 DNAH10OSP0CZ25 163 aa10.18□□□□□ -0.78
DDX39A-221ENST00000593026 RHEBQ15382 184 aa10.18□□□□□ -0.78
DDX39A-221ENST00000593026 CLRN3Q8NCR9 226 aa10.18□□□□□ -0.78
DDX39A-221ENST00000593026 RPL39LQ96EH5 51 aaKnown RBP10.18□□□□□ -0.78
DDX39A-221ENST00000593026 MRAP2Q96G30 205 aa10.18□□□□□ -0.78
DDX39A-221ENST00000593026 BTF3L4Q96K17 158 aa10.18□□□□□ -0.78
DDX39A-221ENST00000593026 IMMP2LQ96T52 175 aa10.18□□□□□ -0.78
DDX39A-221ENST00000593026 TRBV6-8A0A0A6YYG3 113 aa10.17□□□□□ -0.78
DDX39A-221ENST00000593026 C7orf77A4D0Y5 90 aa10.17□□□□□ -0.78
DDX39A-221ENST00000593026 TMEM97Q5BJF2 176 aa10.17□□□□□ -0.78
DDX39A-221ENST00000593026 FAM104BQ5XKR9 115 aa10.17□□□□□ -0.78
DDX39A-221ENST00000593026 KCNIP4Q6PIL6 250 aa10.17□□□□□ -0.78
DDX39A-221ENST00000593026 KRTAP1-5Q9BYS1 174 aa10.17□□□□□ -0.78
DDX39A-221ENST00000593026 DNAH6Q9C0G6 4158 aa10.17□□□□□ -0.78
DDX39A-221ENST00000593026 TRAV9-2A0A087WT02 112 aa10.16□□□□□ -0.78
DDX39A-221ENST00000593026 LINC01556Q5JQF7 62 aa10.16□□□□□ -0.78
DDX39A-221ENST00000593026 SVBPQ8N300 66 aa10.16□□□□□ -0.78
DDX39A-221ENST00000593026 RPS10P5Q9NQ39 176 aa10.16□□□□□ -0.78
DDX39A-221ENST00000593026 TMEM242Q9NWH2 141 aa10.16□□□□□ -0.78
DDX39A-221ENST00000593026 K7EP13 123 aa10.15□□□□□ -0.78
DDX39A-221ENST00000593026 GAS8-AS1O95177 125 aa10.15□□□□□ -0.78
DDX39A-221ENST00000593026 NCR2O95944 276 aa10.15□□□□□ -0.78
DDX39A-221ENST00000593026 S100PP25815 95 aa10.15□□□□□ -0.78
DDX39A-221ENST00000593026 C1orf134Q5TEV5 83 aa10.15□□□□□ -0.78
DDX39A-221ENST00000593026 TRBV6-5A0A0K0K1A5 114 aa10.14□□□□□ -0.79
DDX39A-221ENST00000593026 SMKR1H3BMG3 65 aa10.14□□□□□ -0.79
DDX39A-221ENST00000593026 SNAPINO95295 136 aa10.14□□□□□ -0.79
DDX39A-221ENST00000593026 IGHV3-30P01768 117 aa10.14□□□□□ -0.79
DDX39A-221ENST00000593026 IGHV3-33P01772 117 aa10.14□□□□□ -0.79
DDX39A-221ENST00000593026 IGHV3-30-3P0DP02 117 aa10.14□□□□□ -0.79
DDX39A-221ENST00000593026 IGHV3-30-5P0DP03 117 aa10.14□□□□□ -0.79
DDX39A-221ENST00000593026 MRPL51Q4U2R6 128 aaKnown RBP10.14□□□□□ -0.79
DDX39A-221ENST00000593026 NTM-AS1Q6ZSK4 140 aa10.14□□□□□ -0.79
DDX39A-221ENST00000593026 SLC7A5P1Q8MH63 180 aa10.14□□□□□ -0.79
DDX39A-221ENST00000593026 C6orf223Q8N319 242 aa10.14□□□□□ -0.79
DDX39A-221ENST00000593026 C10orf126Q8N4M7 172 aa10.14□□□□□ -0.79
DDX39A-221ENST00000593026 TRBV25-1A0A075B6N4 114 aa10.13□□□□□ -0.79
DDX39A-221ENST00000593026 TRAV9-1A0A075B6T8 112 aa10.13□□□□□ -0.79
DDX39A-221ENST00000593026 SDHAF1A6NFY7 115 aa10.13□□□□□ -0.79
DDX39A-221ENST00000593026 PPP1R17O96001 155 aa10.13□□□□□ -0.79
DDX39A-221ENST00000593026 RPS10P46783 165 aaKnown RBP10.13□□□□□ -0.79
DDX39A-221ENST00000593026 COTL1Q14019 142 aa10.13□□□□□ -0.79
DDX39A-221ENST00000593026 NIT1Q86X76 327 aa10.13□□□□□ -0.79
DDX39A-221ENST00000593026 ST20Q9HBF5 79 aa10.13□□□□□ -0.79
DDX39A-221ENST00000593026 URGCP-MRPS24S4R325 110 aa10.13□□□□□ -0.79
DDX39A-221ENST00000593026 IGHV1-24A0A0C4DH33 117 aa10.12□□□□□ -0.79
DDX39A-221ENST00000593026 CKS2P33552 79 aa10.12□□□□□ -0.79
DDX39A-221ENST00000593026 CHCHD5Q9BSY4 110 aa10.12□□□□□ -0.79
DDX39A-221ENST00000593026 A0A087WX48 190 aa10.11□□□□□ -0.79
DDX39A-221ENST00000593026 RTL8CO15255 209 aa10.11□□□□□ -0.79
DDX39A-221ENST00000593026 BTF3P20290 206 aaKnown RBP10.11□□□□□ -0.79
DDX39A-221ENST00000593026 IQCJQ1A5X6 159 aa10.11□□□□□ -0.79
DDX39A-221ENST00000593026 Q8N3U1 123 aa10.11□□□□□ -0.79
DDX39A-221ENST00000593026 NRACQ8N912 160 aa10.11□□□□□ -0.79
DDX39A-221ENST00000593026 DEFB104AQ8WTQ1 72 aa10.11□□□□□ -0.79
DDX39A-221ENST00000593026 EPPK1P58107 5090 aaKnown RBP10.11□□□□□ -0.79
DDX39A-221ENST00000593026 D6R8Y8 96 aa10.1□□□□□ -0.79
DDX39A-221ENST00000593026 TMEM262E9PQX1 116 aa10.1□□□□□ -0.79
DDX39A-221ENST00000593026 PPBPP02775 128 aa10.1□□□□□ -0.79
DDX39A-221ENST00000593026 PMCHP20382 165 aa10.1□□□□□ -0.79
DDX39A-221ENST00000593026 AMTP48728 403 aa10.1□□□□□ -0.79
DDX39A-221ENST00000593026 PKIAP61925 76 aa10.1□□□□□ -0.79
DDX39A-221ENST00000593026 LINC00336Q6ZUF6 198 aa10.1□□□□□ -0.79
DDX39A-221ENST00000593026 TMEM243Q9BU79 118 aa10.1□□□□□ -0.79
DDX39A-221ENST00000593026 TMEM70Q9BUB7 260 aa10.1□□□□□ -0.79
DDX39A-221ENST00000593026 CHCHD7Q9BUK0 85 aa10.1□□□□□ -0.79
DDX39A-221ENST00000593026 I3L3M4 83 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 209.5 ms