RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 KIR2DL4Q99706 377 aa10.58□□□□□ -0.72
RANBP3-229ENST00000592771 PMVKQ15126 192 aa10.57□□□□□ -0.72
RANBP3-229ENST00000592771 IGIPA6NJ69 53 aa10.56□□□□□ -0.72
RANBP3-229ENST00000592771 ZFP2Q6ZN57 461 aa10.56□□□□□ -0.72
RANBP3-229ENST00000592771 TRBV27A0A0K0K1C4 114 aa10.56□□□□□ -0.72
RANBP3-229ENST00000592771 ZNF815PA8K554 130 aa10.56□□□□□ -0.72
RANBP3-229ENST00000592771 RPL24P83731 157 aaKnown RBP10.56□□□□□ -0.72
RANBP3-229ENST00000592771 SYT8Q8NBV8 401 aa10.56□□□□□ -0.72
RANBP3-229ENST00000592771 TRAV2A0A0B4J234 112 aa10.55□□□□□ -0.72
RANBP3-229ENST00000592771 CRYGDP07320 174 aa10.55□□□□□ -0.72
RANBP3-229ENST00000592771 RNASE1P07998 156 aaKnown RBP10.55□□□□□ -0.72
RANBP3-229ENST00000592771 SUMO4Q6EEV6 95 aa10.55□□□□□ -0.72
RANBP3-229ENST00000592771 C9orf85Q96MD7 179 aa10.55□□□□□ -0.72
RANBP3-229ENST00000592771 PEMTQ9UBM1 199 aa10.55□□□□□ -0.72
RANBP3-229ENST00000592771 TEX48A0A1B0GUV7 120 aa10.54□□□□□ -0.72
RANBP3-229ENST00000592771 DUSP14O95147 198 aaKnown RBP10.54□□□□□ -0.72
RANBP3-229ENST00000592771 KLHL30-AS1Q8NEE0 82 aa10.54□□□□□ -0.72
RANBP3-229ENST00000592771 TP53TG1Q9Y2A0 90 aa10.54□□□□□ -0.72
RANBP3-229ENST00000592771 SETXQ7Z333 2677 aaKnown RBP10.54□□□□□ -0.72
RANBP3-229ENST00000592771 IGLV4-69A0A075B6H9 119 aa10.54□□□□□ -0.72
RANBP3-229ENST00000592771 C11orf86A6NJI1 115 aa10.54□□□□□ -0.72
RANBP3-229ENST00000592771 SPRY2O43597 315 aa10.54□□□□□ -0.72
RANBP3-229ENST00000592771 CD7P09564 240 aa10.54□□□□□ -0.72
RANBP3-229ENST00000592771 RHOHQ15669 191 aa10.54□□□□□ -0.72
RANBP3-229ENST00000592771 GAGE13Q4V321 117 aa10.54□□□□□ -0.72
RANBP3-229ENST00000592771 SCGB1D4Q6XE38 83 aa10.54□□□□□ -0.72
RANBP3-229ENST00000592771 C16orf95Q9H693 158 aa10.54□□□□□ -0.72
RANBP3-229ENST00000592771 SPANXB1Q9NS25 103 aaPredicted RBP10.54□□□□□ -0.72
RANBP3-229ENST00000592771 SORL1Q92673 2214 aa10.53□□□□□ -0.72
RANBP3-229ENST00000592771 TSHBP01222 138 aa10.53□□□□□ -0.72
RANBP3-229ENST00000592771 UBE2D1P51668 147 aa10.53□□□□□ -0.72
RANBP3-229ENST00000592771 LYRM7Q5U5X0 104 aa10.53□□□□□ -0.72
RANBP3-229ENST00000592771 DLX4Q92988 240 aaPredicted RBP10.53□□□□□ -0.72
RANBP3-229ENST00000592771 SMR3AQ99954 134 aa10.53□□□□□ -0.72
RANBP3-229ENST00000592771 AGRNO00468 2067 aa10.53□□□□□ -0.72
RANBP3-229ENST00000592771 SDHAF1A6NFY7 115 aa10.52□□□□□ -0.72
RANBP3-229ENST00000592771 CYSRT1A8MQ03 144 aa10.52□□□□□ -0.72
RANBP3-229ENST00000592771 A8MTW9 85 aa10.52□□□□□ -0.72
RANBP3-229ENST00000592771 KHDC1LQ5JSQ8 128 aa10.52□□□□□ -0.72
RANBP3-229ENST00000592771 OTOGQ6ZRI0 2925 aa10.52□□□□□ -0.72
RANBP3-229ENST00000592771 MUC4Q99102 2169 aa10.52□□□□□ -0.73
RANBP3-229ENST00000592771 IGHV3-16A0A0C4DH30 117 aa10.52□□□□□ -0.73
RANBP3-229ENST00000592771 SCGB1A1P11684 91 aa10.52□□□□□ -0.73
RANBP3-229ENST00000592771 SRSF9Q13242 221 aaKnown RBP eCLIP10.52□□□□□ -0.73
RANBP3-229ENST00000592771 FHL3Q13643 280 aa10.52□□□□□ -0.73
RANBP3-229ENST00000592771 NSUN5P1Q3KNT7 163 aa10.52□□□□□ -0.73
RANBP3-229ENST00000592771 ZNF876PQ49A33 203 aa10.52□□□□□ -0.73
RANBP3-229ENST00000592771 MORN3Q6PF18 240 aaPredicted RBP10.52□□□□□ -0.73
RANBP3-229ENST00000592771 AMTNQ6UX39 209 aa10.52□□□□□ -0.73
RANBP3-229ENST00000592771 DUX3Q96PT4 197 aa10.52□□□□□ -0.73
RANBP3-229ENST00000592771 H3BMG7 143 aa10.51□□□□□ -0.73
RANBP3-229ENST00000592771 PRO0461Q9UI25 63 aa10.51□□□□□ -0.73
RANBP3-229ENST00000592771 MTORP42345 2549 aa10.51□□□□□ -0.73
RANBP3-229ENST00000592771 TRAV12-3A0A0B4J271 114 aa10.5□□□□□ -0.73
RANBP3-229ENST00000592771 F5H697 171 aa10.5□□□□□ -0.73
RANBP3-229ENST00000592771 WFDC2Q14508 124 aa10.5□□□□□ -0.73
RANBP3-229ENST00000592771 TRPT1Q86TN4 253 aaKnown RBP10.5□□□□□ -0.73
RANBP3-229ENST00000592771 NFE4Q86UQ8 179 aa10.5□□□□□ -0.73
RANBP3-229ENST00000592771 RAX2Q96IS3 184 aa10.5□□□□□ -0.73
RANBP3-229ENST00000592771 CD300EQ496F6 205 aaPredicted RBP10.5□□□□□ -0.73
RANBP3-229ENST00000592771 TMEM61Q8N0U2 210 aa10.5□□□□□ -0.73
RANBP3-229ENST00000592771 ATP6V0E2Q8NHE4 81 aa10.5□□□□□ -0.73
RANBP3-229ENST00000592771 LINC01006Q8NI28 216 aa10.5□□□□□ -0.73
RANBP3-229ENST00000592771 MRPL16Q9NX20 251 aaKnown RBP10.5□□□□□ -0.73
RANBP3-229ENST00000592771 PGPEP1Q9NXJ5 209 aa10.5□□□□□ -0.73
RANBP3-229ENST00000592771 IGHV1OR15-1A0A075B7D0 117 aa10.49□□□□□ -0.73
RANBP3-229ENST00000592771 A0A0J9YY99 117 aa10.49□□□□□ -0.73
RANBP3-229ENST00000592771 HILS1P60008 231 aa10.49□□□□□ -0.73
RANBP3-229ENST00000592771 DEFB114Q30KQ6 69 aa10.49□□□□□ -0.73
RANBP3-229ENST00000592771 EDA2RQ9HAV5 297 aa10.49□□□□□ -0.73
RANBP3-229ENST00000592771 ZNF256Q9Y2P7 627 aaPredicted RBP10.49□□□□□ -0.73
RANBP3-229ENST00000592771 M0QY20 66 aa10.48□□□□□ -0.73
RANBP3-229ENST00000592771 CD28P10747 220 aa10.48□□□□□ -0.73
RANBP3-229ENST00000592771 HIST2H2BDQ6DRA6 164 aa10.48□□□□□ -0.73
RANBP3-229ENST00000592771 PLEKHB2Q96CS7 222 aa10.48□□□□□ -0.73
RANBP3-229ENST00000592771 JPT2Q9H910 190 aa10.48□□□□□ -0.73
RANBP3-229ENST00000592771 A0A087WWL8 130 aa10.48□□□□□ -0.73
RANBP3-229ENST00000592771 LY6G6DO95868 133 aa10.48□□□□□ -0.73
RANBP3-229ENST00000592771 IGKV3-20P01619 116 aa10.48□□□□□ -0.73
RANBP3-229ENST00000592771 SLC25A29Q8N8R3 303 aa10.48□□□□□ -0.73
RANBP3-229ENST00000592771 ZNF418Q8TF45 676 aaPredicted RBP10.48□□□□□ -0.73
RANBP3-229ENST00000592771 SIGMAR1Q99720 223 aa10.48□□□□□ -0.73
RANBP3-229ENST00000592771 TRGV11A0A075B6L2 103 aa10.47□□□□□ -0.73
RANBP3-229ENST00000592771 TMEM238C9JI98 176 aa10.47□□□□□ -0.73
RANBP3-229ENST00000592771 DEFB131AP59861 70 aa10.47□□□□□ -0.73
RANBP3-229ENST00000592771 UBE2D3P61077 147 aa10.47□□□□□ -0.73
RANBP3-229ENST00000592771 UBE2D2P62837 147 aa10.47□□□□□ -0.73
RANBP3-229ENST00000592771 SPINK13Q1W4C9 94 aa10.47□□□□□ -0.73
RANBP3-229ENST00000592771 DYNLRB2Q8TF09 96 aa10.47□□□□□ -0.73
RANBP3-229ENST00000592771 SPATA25Q9BR10 227 aa10.47□□□□□ -0.73
RANBP3-229ENST00000592771 TRAV12-2A0A075B6T6 113 aa10.46□□□□□ -0.73
RANBP3-229ENST00000592771 CCL24O00175 119 aa10.46□□□□□ -0.73
RANBP3-229ENST00000592771 NDUFA7O95182 113 aa10.46□□□□□ -0.73
RANBP3-229ENST00000592771 RPL39P62891 51 aaKnown RBP10.46□□□□□ -0.73
RANBP3-229ENST00000592771 MDFICQ9P1T7 246 aa10.46□□□□□ -0.73
RANBP3-229ENST00000592771 TSSC4Q9Y5U2 329 aaPredicted RBP10.46□□□□□ -0.73
RANBP3-229ENST00000592771 NF1P21359 2839 aa10.46□□□□□ -0.74
RANBP3-229ENST00000592771 TRBV20-1A0A075B6N2 111 aa10.46□□□□□ -0.74
RANBP3-229ENST00000592771 TRAV25A0A0B4J276 109 aa10.46□□□□□ -0.74
RANBP3-229ENST00000592771 H3BMM0 161 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms