RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 H2AFB1P0C5Y9 115 aa12.32□□□□□ -0.44
CCDC43-205ENST00000592333 MIAQ16674 131 aa12.32□□□□□ -0.44
CCDC43-205ENST00000592333 ENHOQ6UWT2 76 aa12.32□□□□□ -0.44
CCDC43-205ENST00000592333 TMUB2Q71RG4 321 aa12.32□□□□□ -0.44
CCDC43-205ENST00000592333 DNAJC30Q96LL9 226 aa12.32□□□□□ -0.44
CCDC43-205ENST00000592333 KANTRA0A1W2PQU2 76 aa12.31□□□□□ -0.44
CCDC43-205ENST00000592333 BCL2L11O43521 198 aa12.3□□□□□ -0.44
CCDC43-205ENST00000592333 SMIM17P0DL12 118 aa12.3□□□□□ -0.44
CCDC43-205ENST00000592333 RPL19P84098 196 aaKnown RBP12.3□□□□□ -0.44
CCDC43-205ENST00000592333 MANBALQ9NQG1 85 aa12.3□□□□□ -0.44
CCDC43-205ENST00000592333 F5H697 171 aa12.29□□□□□ -0.44
CCDC43-205ENST00000592333 IGLV2-8P01709 118 aa12.29□□□□□ -0.44
CCDC43-205ENST00000592333 ANGP03950 147 aaKnown RBP12.29□□□□□ -0.44
CCDC43-205ENST00000592333 MPV17L2Q567V2 206 aa12.29□□□□□ -0.44
CCDC43-205ENST00000592333 DGAT2L7PQ6IED9 249 aa12.29□□□□□ -0.44
CCDC43-205ENST00000592333 C15orf54Q8N8G6 183 aa12.29□□□□□ -0.44
CCDC43-205ENST00000592333 SMIM12Q96EX1 92 aa12.29□□□□□ -0.44
CCDC43-205ENST00000592333 AP1S3Q96PC3 154 aa12.29□□□□□ -0.44
CCDC43-205ENST00000592333 CHCHD5Q9BSY4 110 aa12.29□□□□□ -0.44
CCDC43-205ENST00000592333 PRR34Q9NV39 138 aa12.29□□□□□ -0.44
CCDC43-205ENST00000592333 KIF25-AS1Q9Y6Z4 181 aa12.29□□□□□ -0.44
CCDC43-205ENST00000592333 TRAV1-1A0A0B4J248 108 aa12.28□□□□□ -0.44
CCDC43-205ENST00000592333 LINC01620Q4KN68 170 aa12.28□□□□□ -0.44
CCDC43-205ENST00000592333 CIRBP-AS1Q8TBR5 109 aa12.28□□□□□ -0.44
CCDC43-205ENST00000592333 C11orf52Q96A22 123 aa12.28□□□□□ -0.44
CCDC43-205ENST00000592333 SMLR1H3BR10 107 aa12.27□□□□□ -0.45
CCDC43-205ENST00000592333 H7C1H1 209 aa12.27□□□□□ -0.45
CCDC43-205ENST00000592333 RPL35P42766 123 aaKnown RBP12.27□□□□□ -0.45
CCDC43-205ENST00000592333 RAB5CP51148 216 aa12.27□□□□□ -0.45
CCDC43-205ENST00000592333 RPS20P60866 119 aaKnown RBP12.27□□□□□ -0.45
CCDC43-205ENST00000592333 TRBV25-1A0A075B6N4 114 aa12.26□□□□□ -0.45
CCDC43-205ENST00000592333 IQCJQ1A5X6 159 aa12.26□□□□□ -0.45
CCDC43-205ENST00000592333 NTM-AS1Q6ZSK4 140 aa12.26□□□□□ -0.45
CCDC43-205ENST00000592333 A0A1B0GV50 99 aa12.25□□□□□ -0.45
CCDC43-205ENST00000592333 TEX46H3BTG2 121 aa12.25□□□□□ -0.45
CCDC43-205ENST00000592333 KRTAP10-4P60372 401 aaPredicted RBP12.25□□□□□ -0.45
CCDC43-205ENST00000592333 DERL1Q9BUN8 251 aa12.25□□□□□ -0.45
CCDC43-205ENST00000592333 USP17L23D6RBM5 183 aa12.24□□□□□ -0.45
CCDC43-205ENST00000592333 F2Z2F3 143 aa12.24□□□□□ -0.45
CCDC43-205ENST00000592333 OXTP01178 125 aa12.24□□□□□ -0.45
CCDC43-205ENST00000592333 IGLC6P0CF74 106 aa12.24□□□□□ -0.45
CCDC43-205ENST00000592333 CACNG7P62955 275 aa12.24□□□□□ -0.45
CCDC43-205ENST00000592333 EIF5AL1Q6IS14 154 aaKnown RBP12.24□□□□□ -0.45
CCDC43-205ENST00000592333 CLRN3Q8NCR9 226 aa12.24□□□□□ -0.45
CCDC43-205ENST00000592333 DAZAP1Q96EP5 407 aaKnown RBP12.24□□□□□ -0.45
CCDC43-205ENST00000592333 XKRY2A2RUG3 117 aa12.23□□□□□ -0.45
CCDC43-205ENST00000592333 M0QY20 66 aa12.23□□□□□ -0.45
CCDC43-205ENST00000592333 RBX1P62877 108 aa12.23□□□□□ -0.45
CCDC43-205ENST00000592333 C9orf163Q8N9P6 203 aa12.23□□□□□ -0.45
CCDC43-205ENST00000592333 BIN3Q9NQY0 253 aa12.23□□□□□ -0.45
CCDC43-205ENST00000592333 IGHV1-24A0A0C4DH33 117 aa12.22□□□□□ -0.45
CCDC43-205ENST00000592333 MUC21A0A0G2JKD1 596 aa12.22□□□□□ -0.45
CCDC43-205ENST00000592333 MUC21A0A140T8X8 626 aa12.22□□□□□ -0.45
CCDC43-205ENST00000592333 CCL20P78556 96 aa12.22□□□□□ -0.45
CCDC43-205ENST00000592333 FER1L6-AS1Q8NA97 138 aa12.22□□□□□ -0.45
CCDC43-205ENST00000592333 TRAV8-4A0A0B4J246 113 aa12.21□□□□□ -0.45
CCDC43-205ENST00000592333 A0A1B0GUV1 79 aa12.21□□□□□ -0.45
CCDC43-205ENST00000592333 C19orf71A6NCJ1 209 aa12.21□□□□□ -0.45
CCDC43-205ENST00000592333 PDE6DO43924 150 aa12.21□□□□□ -0.45
CCDC43-205ENST00000592333 P01737 135 aa12.21□□□□□ -0.45
CCDC43-205ENST00000592333 HLA-DQA1P01909 254 aa12.21□□□□□ -0.45
CCDC43-205ENST00000592333 SERTAD4-AS1Q5TG53 156 aa12.21□□□□□ -0.45
CCDC43-205ENST00000592333 GNG13Q9P2W3 67 aa12.21□□□□□ -0.45
CCDC43-205ENST00000592333 PRSS1P07477 247 aa12.2□□□□□ -0.46
CCDC43-205ENST00000592333 CENPWQ5EE01 88 aa12.2□□□□□ -0.46
CCDC43-205ENST00000592333 KRTAP26-1Q6PEX3 210 aa12.2□□□□□ -0.46
CCDC43-205ENST00000592333 LINC00269Q8N2A0 174 aa12.2□□□□□ -0.46
CCDC43-205ENST00000592333 OR2D3Q8NGH3 330 aa12.2□□□□□ -0.46
CCDC43-205ENST00000592333 PGLYRP4Q96LB8 373 aa12.2□□□□□ -0.46
CCDC43-205ENST00000592333 TRGC1P0CF51 173 aa12.19□□□□□ -0.46
CCDC43-205ENST00000592333 GZMBP10144 247 aa12.19□□□□□ -0.46
CCDC43-205ENST00000592333 GNG4P50150 75 aa12.19□□□□□ -0.46
CCDC43-205ENST00000592333 WDR73Q6P4I2 378 aa12.19□□□□□ -0.46
CCDC43-205ENST00000592333 SSTP61278 116 aa12.18□□□□□ -0.46
CCDC43-205ENST00000592333 MEF2BQ02080 365 aaPredicted RBP12.18□□□□□ -0.46
CCDC43-205ENST00000592333 REG3AQ06141 175 aa12.18□□□□□ -0.46
CCDC43-205ENST00000592333 GAGE6Q13070 117 aa12.18□□□□□ -0.46
CCDC43-205ENST00000592333 RASL11AQ6T310 242 aa12.18□□□□□ -0.46
CCDC43-205ENST00000592333 MGPP08493 103 aa12.17□□□□□ -0.46
CCDC43-205ENST00000592333 TAGLN2P37802 199 aaKnown RBP12.17□□□□□ -0.46
CCDC43-205ENST00000592333 SUMO4Q6EEV6 95 aa12.17□□□□□ -0.46
CCDC43-205ENST00000592333 C9orf62Q8N4C0 152 aa12.17□□□□□ -0.46
CCDC43-205ENST00000592333 NIT2Q9NQR4 276 aa12.17□□□□□ -0.46
CCDC43-205ENST00000592333 IFNA1P01562 189 aa12.16□□□□□ -0.46
CCDC43-205ENST00000592333 SULT1A2P50226 295 aa12.16□□□□□ -0.46
CCDC43-205ENST00000592333 CNBPP62633 177 aaKnown RBP12.16□□□□□ -0.46
CCDC43-205ENST00000592333 TMEM243Q9BU79 118 aa12.16□□□□□ -0.46
CCDC43-205ENST00000592333 TPPP3Q9BW30 176 aa12.16□□□□□ -0.46
CCDC43-205ENST00000592333 DPH3P1Q9H4G8 78 aa12.16□□□□□ -0.46
CCDC43-205ENST00000592333 RPL37AP61513 92 aaKnown RBP12.15□□□□□ -0.46
CCDC43-205ENST00000592333 SDIM1Q6ZPB5 146 aa12.15□□□□□ -0.46
CCDC43-205ENST00000592333 C20orf203Q8NBC4 194 aa12.14□□□□□ -0.47
CCDC43-205ENST00000592333 CNFNQ9BYD5 112 aa12.14□□□□□ -0.47
CCDC43-205ENST00000592333 RAB19A4D1S5 217 aa12.13□□□□□ -0.47
CCDC43-205ENST00000592333 NTF3P20783 257 aa12.13□□□□□ -0.47
CCDC43-205ENST00000592333 NKX2-5P52952 324 aaPredicted RBP12.13□□□□□ -0.47
CCDC43-205ENST00000592333 CIRBPQ14011 172 aaKnown RBP12.13□□□□□ -0.47
CCDC43-205ENST00000592333 LYZL1Q6UWQ5 148 aa12.13□□□□□ -0.47
CCDC43-205ENST00000592333 MED9Q9NWA0 146 aa12.13□□□□□ -0.47
CCDC43-205ENST00000592333 BCL2P10415 239 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms