RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 TRBV20OR9-2A0A075B6H5 130 aa12.12□□□□□ -0.47
CIRBP-237ENST00000592234 NIT1Q86X76 327 aa12.12□□□□□ -0.47
CIRBP-237ENST00000592234 BAALCQ8WXS3 180 aa12.12□□□□□ -0.47
CIRBP-237ENST00000592234 SSBP4Q9BWG4 385 aaPredicted RBP12.12□□□□□ -0.47
CIRBP-237ENST00000592234 C19orf71A6NCJ1 209 aa12.11□□□□□ -0.47
CIRBP-237ENST00000592234 OR5AL1P0C617 328 aa12.11□□□□□ -0.47
CIRBP-237ENST00000592234 IGKV2D-24A0A075B6R9 120 aa12.1□□□□□ -0.47
CIRBP-237ENST00000592234 F5H697 171 aa12.1□□□□□ -0.47
CIRBP-237ENST00000592234 P01737 135 aa12.1□□□□□ -0.47
CIRBP-237ENST00000592234 RPL36AP83881 106 aaKnown RBP12.1□□□□□ -0.47
CIRBP-237ENST00000592234 KCNIP4Q6PIL6 250 aa12.1□□□□□ -0.47
CIRBP-237ENST00000592234 FER1L6-AS1Q8NA97 138 aa12.1□□□□□ -0.47
CIRBP-237ENST00000592234 RPL36ALQ969Q0 106 aaKnown RBP12.1□□□□□ -0.47
CIRBP-237ENST00000592234 KLK12Q9UKR0 248 aa12.1□□□□□ -0.47
CIRBP-237ENST00000592234 A0A087WX48 190 aa12.09□□□□□ -0.47
CIRBP-237ENST00000592234 TRBV10-1A0A0K0K1A3 114 aa12.09□□□□□ -0.47
CIRBP-237ENST00000592234 RAB4BP61018 213 aa12.09□□□□□ -0.47
CIRBP-237ENST00000592234 BLOC1S1P78537 153 aa12.09□□□□□ -0.47
CIRBP-237ENST00000592234 Q6ZSA8 131 aa12.09□□□□□ -0.47
CIRBP-237ENST00000592234 IGLC6P0CF74 106 aa12.08□□□□□ -0.48
CIRBP-237ENST00000592234 SMIM17P0DL12 118 aa12.08□□□□□ -0.48
CIRBP-237ENST00000592234 RPS20P60866 119 aaKnown RBP12.08□□□□□ -0.48
CIRBP-237ENST00000592234 UBE2D3P61077 147 aa12.08□□□□□ -0.48
CIRBP-237ENST00000592234 UBE2D2P62837 147 aa12.08□□□□□ -0.48
CIRBP-237ENST00000592234 ELOBQ15370 118 aa12.08□□□□□ -0.48
CIRBP-237ENST00000592234 NEXN-AS1Q8NBZ9 246 aa12.08□□□□□ -0.48
CIRBP-237ENST00000592234 UBE2WQ96B02 151 aa12.08□□□□□ -0.48
CIRBP-237ENST00000592234 SMIM12Q96EX1 92 aa12.08□□□□□ -0.48
CIRBP-237ENST00000592234 DNAJC30Q96LL9 226 aa12.08□□□□□ -0.48
CIRBP-237ENST00000592234 CHCHD7Q9BUK0 85 aa12.08□□□□□ -0.48
CIRBP-237ENST00000592234 TRBV7-3A0A075B6L6 115 aa12.07□□□□□ -0.48
CIRBP-237ENST00000592234 PLA2G1BP04054 148 aaKnown RBP12.07□□□□□ -0.48
CIRBP-237ENST00000592234 MGPP08493 103 aa12.07□□□□□ -0.48
CIRBP-237ENST00000592234 TAGLN2P37802 199 aaKnown RBP12.07□□□□□ -0.48
CIRBP-237ENST00000592234 CEBPGP53567 150 aa12.07□□□□□ -0.48
CIRBP-237ENST00000592234 Q8N976 141 aa12.07□□□□□ -0.48
CIRBP-237ENST00000592234 AP1S3Q96PC3 154 aa12.07□□□□□ -0.48
CIRBP-237ENST00000592234 NUDT10Q8NFP7 164 aa12.06□□□□□ -0.48
CIRBP-237ENST00000592234 NUDT11Q96G61 164 aa12.06□□□□□ -0.48
CIRBP-237ENST00000592234 XKRY2A2RUG3 117 aa12.05□□□□□ -0.48
CIRBP-237ENST00000592234 K7EN84 100 aa12.05□□□□□ -0.48
CIRBP-237ENST00000592234 LINC01620Q4KN68 170 aa12.05□□□□□ -0.48
CIRBP-237ENST00000592234 LINC00528Q8N1L1 170 aa12.05□□□□□ -0.48
CIRBP-237ENST00000592234 OCC1Q8TAD7 63 aa12.05□□□□□ -0.48
CIRBP-237ENST00000592234 RNASE7Q9H1E1 156 aaKnown RBP12.05□□□□□ -0.48
CIRBP-237ENST00000592234 BIN3Q9NQY0 253 aa12.05□□□□□ -0.48
CIRBP-237ENST00000592234 KIF25-AS1Q9Y6Z4 181 aa12.05□□□□□ -0.48
CIRBP-237ENST00000592234 TMEM262E9PQX1 116 aa12.04□□□□□ -0.48
CIRBP-237ENST00000592234 Q0VG73 95 aa12.04□□□□□ -0.48
CIRBP-237ENST00000592234 LYZL1Q6UWQ5 148 aa12.04□□□□□ -0.48
CIRBP-237ENST00000592234 OR10G8Q8NGN5 311 aa12.04□□□□□ -0.48
CIRBP-237ENST00000592234 J3QL48 77 aa12.03□□□□□ -0.48
CIRBP-237ENST00000592234 CACNG7P62955 275 aa12.03□□□□□ -0.48
CIRBP-237ENST00000592234 TRBV6-8A0A0A6YYG3 113 aa12.02□□□□□ -0.49
CIRBP-237ENST00000592234 ATRAIDQ6UW56 229 aa12.02□□□□□ -0.49
CIRBP-237ENST00000592234 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.02□□□□□ -0.49
CIRBP-237ENST00000592234 LYPD6BQ8NI32 183 aa12.02□□□□□ -0.49
CIRBP-237ENST00000592234 C1orf43Q9BWL3 253 aa12.02□□□□□ -0.49
CIRBP-237ENST00000592234 RPP21Q9H633 154 aaKnown RBP12.02□□□□□ -0.49
CIRBP-237ENST00000592234 CRPP02741 224 aa12.01□□□□□ -0.49
CIRBP-237ENST00000592234 SUMO4Q6EEV6 95 aa12.01□□□□□ -0.49
CIRBP-237ENST00000592234 SCXQ7RTU7 201 aa12.01□□□□□ -0.49
CIRBP-237ENST00000592234 EIF5A2Q9GZV4 153 aaKnown RBP12.01□□□□□ -0.49
CIRBP-237ENST00000592234 F2Z2F3 143 aa12□□□□□ -0.49
CIRBP-237ENST00000592234 TMEM250H0YL14 139 aa12□□□□□ -0.49
CIRBP-237ENST00000592234 NTF3P20783 257 aa12□□□□□ -0.49
CIRBP-237ENST00000592234 C15orf54Q8N8G6 183 aa12□□□□□ -0.49
CIRBP-237ENST00000592234 C14orf177Q52M58 125 aa11.99□□□□□ -0.49
CIRBP-237ENST00000592234 MPV17L2Q567V2 206 aa11.99□□□□□ -0.49
CIRBP-237ENST00000592234 GATCO43716 136 aaKnown RBP11.98□□□□□ -0.49
CIRBP-237ENST00000592234 ANGP03950 147 aaKnown RBP11.98□□□□□ -0.49
CIRBP-237ENST00000592234 TRGC1P0CF51 173 aa11.98□□□□□ -0.49
CIRBP-237ENST00000592234 TWIST1Q15672 202 aa11.98□□□□□ -0.49
CIRBP-237ENST00000592234 ENHOQ6UWT2 76 aa11.98□□□□□ -0.49
CIRBP-237ENST00000592234 DEFB104AQ8WTQ1 72 aa11.98□□□□□ -0.49
CIRBP-237ENST00000592234 CHCHD5Q9BSY4 110 aa11.98□□□□□ -0.49
CIRBP-237ENST00000592234 M0QY20 66 aa11.97□□□□□ -0.49
CIRBP-237ENST00000592234 CTRLP40313 264 aa11.97□□□□□ -0.49
CIRBP-237ENST00000592234 PKIAP61925 76 aa11.97□□□□□ -0.49
CIRBP-237ENST00000592234 NTM-AS1Q6ZSK4 140 aa11.97□□□□□ -0.49
CIRBP-237ENST00000592234 FAM210AQ96ND0 272 aa11.97□□□□□ -0.49
CIRBP-237ENST00000592234 CHAC1Q9BUX1 264 aa11.97□□□□□ -0.49
CIRBP-237ENST00000592234 DPH3P1Q9H4G8 78 aa11.97□□□□□ -0.49
CIRBP-237ENST00000592234 TMEM97Q5BJF2 176 aa11.96□□□□□ -0.49
CIRBP-237ENST00000592234 SMIM7Q9BQ49 75 aa11.96□□□□□ -0.49
CIRBP-237ENST00000592234 H7C1H1 209 aa11.95□□□□□ -0.5
CIRBP-237ENST00000592234 HLA-DQA1P01909 254 aa11.95□□□□□ -0.5
CIRBP-237ENST00000592234 GAGE6Q13070 117 aa11.95□□□□□ -0.5
CIRBP-237ENST00000592234 GTSF1Q8WW33 167 aa11.95□□□□□ -0.5
CIRBP-237ENST00000592234 KRTAP29-1A8MX34 341 aaPredicted RBP11.94□□□□□ -0.5
CIRBP-237ENST00000592234 SRP19P09132 144 aaKnown RBP11.94□□□□□ -0.5
CIRBP-237ENST00000592234 MIAQ16674 131 aa11.94□□□□□ -0.5
CIRBP-237ENST00000592234 RASL11AQ6T310 242 aa11.94□□□□□ -0.5
CIRBP-237ENST00000592234 CIRBP-AS1Q8TBR5 109 aa11.94□□□□□ -0.5
CIRBP-237ENST00000592234 PGLYRP4Q96LB8 373 aa11.94□□□□□ -0.5
CIRBP-237ENST00000592234 TRAV26-2A0A0B4J265 109 aa11.93□□□□□ -0.5
CIRBP-237ENST00000592234 ZNF727A8MUV8 499 aa11.93□□□□□ -0.5
CIRBP-237ENST00000592234 TRBV25-1A0A075B6N4 114 aa11.92□□□□□ -0.5
CIRBP-237ENST00000592234 USP17L23D6RBM5 183 aa11.92□□□□□ -0.5
CIRBP-237ENST00000592234 FOXA3P55318 350 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms