RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 TMEM218A2RU14 115 aa4.47□□□□□ -1.69
VPS4B-205ENST00000591383 HIGD1CA8MV81 97 aa4.47□□□□□ -1.69
VPS4B-205ENST00000591383 K7EQD1 137 aa4.47□□□□□ -1.69
VPS4B-205ENST00000591383 TRGC1P0CF51 173 aa4.47□□□□□ -1.69
VPS4B-205ENST00000591383 GAGE1Q13065 139 aa4.47□□□□□ -1.69
VPS4B-205ENST00000591383 GAGE4Q13068 117 aa4.47□□□□□ -1.69
VPS4B-205ENST00000591383 TWIST1Q15672 202 aa4.47□□□□□ -1.69
VPS4B-205ENST00000591383 RNF212Q495C1 297 aa4.47□□□□□ -1.69
VPS4B-205ENST00000591383 POM121L12Q8N7R1 296 aa4.47□□□□□ -1.69
VPS4B-205ENST00000591383 TSKUQ8WUA8 353 aa4.47□□□□□ -1.69
VPS4B-205ENST00000591383 FAM210BQ96KR6 192 aa4.47□□□□□ -1.69
VPS4B-205ENST00000591383 SAMD10Q9BYL1 202 aa4.47□□□□□ -1.69
VPS4B-205ENST00000591383 PRO0255Q9UI72 69 aa4.47□□□□□ -1.69
VPS4B-205ENST00000591383 COX11Q9Y6N1 276 aa4.47□□□□□ -1.69
VPS4B-205ENST00000591383 ICOSQ9Y6W8 199 aa4.47□□□□□ -1.69
VPS4B-205ENST00000591383 V9GYV3 84 aa4.47□□□□□ -1.69
VPS4B-205ENST00000591383 VPS13DQ5THJ4 4388 aa4.47□□□□□ -1.69
VPS4B-205ENST00000591383 LOC100131303A0A0U1RQF7 123 aa4.46□□□□□ -1.7
VPS4B-205ENST00000591383 F2Z2F3 143 aa4.46□□□□□ -1.7
VPS4B-205ENST00000591383 LY6G6CO95867 125 aa4.46□□□□□ -1.7
VPS4B-205ENST00000591383 MT-ND4LP03901 98 aa4.46□□□□□ -1.7
VPS4B-205ENST00000591383 GATA1P15976 413 aaPredicted RBP4.46□□□□□ -1.7
VPS4B-205ENST00000591383 SRIP30626 198 aa4.46□□□□□ -1.7
VPS4B-205ENST00000591383 CRYBA4P53673 196 aa4.46□□□□□ -1.7
VPS4B-205ENST00000591383 RHOHQ15669 191 aa4.46□□□□□ -1.7
VPS4B-205ENST00000591383 NDUFA5Q16718 116 aa4.46□□□□□ -1.7
VPS4B-205ENST00000591383 SMIM15Q7Z3B0 74 aa4.46□□□□□ -1.7
VPS4B-205ENST00000591383 ZNF575Q86XF7 245 aa4.46□□□□□ -1.7
VPS4B-205ENST00000591383 C14orf178Q8N769 122 aaPredicted RBP4.46□□□□□ -1.7
VPS4B-205ENST00000591383 PTH2Q96A98 100 aa4.46□□□□□ -1.7
VPS4B-205ENST00000591383 PRADC1Q9BSG0 188 aa4.46□□□□□ -1.7
VPS4B-205ENST00000591383 NAT8BQ9UHF3 227 aa4.46□□□□□ -1.7
VPS4B-205ENST00000591383 HHLA3Q9XRX5 114 aa4.46□□□□□ -1.7
VPS4B-205ENST00000591383 SACSQ9NZJ4 4579 aa4.45□□□□□ -1.7
VPS4B-205ENST00000591383 A0A1B0GUT8 65 aa4.45□□□□□ -1.7
VPS4B-205ENST00000591383 PPP1R2P9O14990 202 aa4.45□□□□□ -1.7
VPS4B-205ENST00000591383 P0DMU3 169 aa4.45□□□□□ -1.7
VPS4B-205ENST00000591383 FAM231AP0DMU4 169 aa4.45□□□□□ -1.7
VPS4B-205ENST00000591383 FAM231CP0DMU5 169 aa4.45□□□□□ -1.7
VPS4B-205ENST00000591383 TCTAP57738 103 aa4.45□□□□□ -1.7
VPS4B-205ENST00000591383 GAGE5Q13069 117 aa4.45□□□□□ -1.7
VPS4B-205ENST00000591383 SLAQ13239 276 aa4.45□□□□□ -1.7
VPS4B-205ENST00000591383 MRPL54Q6P161 138 aaKnown RBP4.45□□□□□ -1.7
VPS4B-205ENST00000591383 ZFP2Q6ZN57 461 aa4.45□□□□□ -1.7
VPS4B-205ENST00000591383 SLC25A29Q8N8R3 303 aa4.45□□□□□ -1.7
VPS4B-205ENST00000591383 NUP35Q8NFH5 326 aa4.45□□□□□ -1.7
VPS4B-205ENST00000591383 VSIG2Q96IQ7 327 aa4.45□□□□□ -1.7
VPS4B-205ENST00000591383 SEC11CQ9BY50 192 aa4.45□□□□□ -1.7
VPS4B-205ENST00000591383 GFRA4Q9GZZ7 299 aa4.45□□□□□ -1.7
VPS4B-205ENST00000591383 DPH3P1Q9H4G8 78 aa4.45□□□□□ -1.7
VPS4B-205ENST00000591383 APLNQ9ULZ1 77 aa4.45□□□□□ -1.7
VPS4B-205ENST00000591383 LCE6AA0A183 80 aa4.44□□□□□ -1.7
VPS4B-205ENST00000591383 SMIM27A0A1W2PRY6 76 aa4.44□□□□□ -1.7
VPS4B-205ENST00000591383 CIDEAO60543 219 aa4.44□□□□□ -1.7
VPS4B-205ENST00000591383 APOC3P02656 99 aa4.44□□□□□ -1.7
VPS4B-205ENST00000591383 CRYGDP07320 174 aa4.44□□□□□ -1.7
VPS4B-205ENST00000591383 NTF3P20783 257 aa4.44□□□□□ -1.7
VPS4B-205ENST00000591383 EVI2AP22794 236 aa4.44□□□□□ -1.7
VPS4B-205ENST00000591383 RIGQ13278 110 aa4.44□□□□□ -1.7
VPS4B-205ENST00000591383 MRPL23Q16540 153 aaKnown RBP4.44□□□□□ -1.7
VPS4B-205ENST00000591383 UFSP1Q6NVU6 142 aa4.44□□□□□ -1.7
VPS4B-205ENST00000591383 KRTAP19-1Q8IUB9 90 aa4.44□□□□□ -1.7
VPS4B-205ENST00000591383 SLC7A5P1Q8MH63 180 aa4.44□□□□□ -1.7
VPS4B-205ENST00000591383 CNFNQ9BYD5 112 aa4.44□□□□□ -1.7
VPS4B-205ENST00000591383 CARHSP1Q9Y2V2 147 aaKnown RBP4.44□□□□□ -1.7
VPS4B-205ENST00000591383 KMT2CQ8NEZ4 4911 aaKnown RBP4.44□□□□□ -1.7
VPS4B-205ENST00000591383 IGLV5-52A0A0A0MRZ9 124 aa4.43□□□□□ -1.7
VPS4B-205ENST00000591383 TRAV26-2A0A0B4J265 109 aa4.43□□□□□ -1.7
VPS4B-205ENST00000591383 TRBV6-4A0A1B0GX49 114 aa4.43□□□□□ -1.7
VPS4B-205ENST00000591383 FAM231BA6NCW3 169 aa4.43□□□□□ -1.7
VPS4B-205ENST00000591383 H3BNG1 76 aa4.43□□□□□ -1.7
VPS4B-205ENST00000591383 CCL18P55774 89 aa4.43□□□□□ -1.7
VPS4B-205ENST00000591383 RAB4BP61018 213 aa4.43□□□□□ -1.7
VPS4B-205ENST00000591383 HBBP68871 147 aa4.43□□□□□ -1.7
VPS4B-205ENST00000591383 RHEBQ15382 184 aa4.43□□□□□ -1.7
VPS4B-205ENST00000591383 KCNIP4Q6PIL6 250 aa4.43□□□□□ -1.7
VPS4B-205ENST00000591383 NEGR1Q7Z3B1 354 aa4.43□□□□□ -1.7
VPS4B-205ENST00000591383 PRR26Q8N8Z3 221 aa4.43□□□□□ -1.7
VPS4B-205ENST00000591383 Q9H8V8 135 aa4.43□□□□□ -1.7
VPS4B-205ENST00000591383 RPS10P5Q9NQ39 176 aa4.43□□□□□ -1.7
VPS4B-205ENST00000591383 H7C1H1 209 aa4.42□□□□□ -1.7
VPS4B-205ENST00000591383 NCR2O95944 276 aa4.42□□□□□ -1.7
VPS4B-205ENST00000591383 S100A8P05109 93 aa4.42□□□□□ -1.7
VPS4B-205ENST00000591383 S100PP25815 95 aa4.42□□□□□ -1.7
VPS4B-205ENST00000591383 FOXA3P55318 350 aaPredicted RBP4.42□□□□□ -1.7
VPS4B-205ENST00000591383 RPL36AP83881 106 aaKnown RBP4.42□□□□□ -1.7
VPS4B-205ENST00000591383 LGALS9CQ6DKI2 356 aa4.42□□□□□ -1.7
VPS4B-205ENST00000591383 SVBPQ8N300 66 aa4.42□□□□□ -1.7
VPS4B-205ENST00000591383 RPL36ALQ969Q0 106 aaKnown RBP4.42□□□□□ -1.7
VPS4B-205ENST00000591383 KIF25-AS1Q9Y6Z4 181 aa4.42□□□□□ -1.7
VPS4B-205ENST00000591383 URGCP-MRPS24S4R325 110 aa4.42□□□□□ -1.7
VPS4B-205ENST00000591383 RYR2Q92736 4967 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 IGLV2-18A0A075B6J9 118 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 IGHV3-38A0A0C4DH36 116 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 TRBV10-1A0A0K0K1A3 114 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 A0A1B0GW15 77 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 C7orf77A4D0Y5 90 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 SMKR1H3BMG3 65 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 SNAPINO95295 136 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 LINC00694P0DN24 101 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms