RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 SSTP61278 116 aa14.13□□□□□ -0.15
DDX39A-215ENST00000590696 LRP1Q07954 4544 aaKnown RBP14.12□□□□□ -0.15
DDX39A-215ENST00000590696 IGLV2-8P01709 118 aa14.12□□□□□ -0.15
DDX39A-215ENST00000590696 OR5AL1P0C617 328 aa14.12□□□□□ -0.15
DDX39A-215ENST00000590696 NTM-AS1Q6ZSK4 140 aa14.12□□□□□ -0.15
DDX39A-215ENST00000590696 KCNRGQ8N5I3 272 aa14.12□□□□□ -0.15
DDX39A-215ENST00000590696 UMAD1C9J7I0 102 aa14.11□□□□□ -0.15
DDX39A-215ENST00000590696 USP17L23D6RBM5 183 aa14.11□□□□□ -0.15
DDX39A-215ENST00000590696 HLA-DQA1P01909 254 aa14.11□□□□□ -0.15
DDX39A-215ENST00000590696 PKIAP61925 76 aa14.11□□□□□ -0.15
DDX39A-215ENST00000590696 MIAQ16674 131 aa14.1□□□□□ -0.15
DDX39A-215ENST00000590696 RGS21Q2M5E4 152 aa14.1□□□□□ -0.15
DDX39A-215ENST00000590696 TMEM97Q5BJF2 176 aa14.1□□□□□ -0.15
DDX39A-215ENST00000590696 TMUB2Q71RG4 321 aa14.1□□□□□ -0.15
DDX39A-215ENST00000590696 ZNF345Q14585 488 aa14.09□□□□□ -0.15
DDX39A-215ENST00000590696 VAX2Q9UIW0 290 aa14.09□□□□□ -0.15
DDX39A-215ENST00000590696 KIF25-AS1Q9Y6Z4 181 aa14.09□□□□□ -0.15
DDX39A-215ENST00000590696 FAT3Q8TDW7 4589 aa14.08□□□□□ -0.16
DDX39A-215ENST00000590696 PRSS1P07477 247 aa14.08□□□□□ -0.16
DDX39A-215ENST00000590696 SMIM17P0DL12 118 aa14.08□□□□□ -0.16
DDX39A-215ENST00000590696 DERL1Q9BUN8 251 aa14.08□□□□□ -0.16
DDX39A-215ENST00000590696 OXTP01178 125 aa14.07□□□□□ -0.16
DDX39A-215ENST00000590696 H2AFB1P0C5Y9 115 aa14.07□□□□□ -0.16
DDX39A-215ENST00000590696 RBX1P62877 108 aa14.07□□□□□ -0.16
DDX39A-215ENST00000590696 GAGE6Q13070 117 aa14.07□□□□□ -0.16
DDX39A-215ENST00000590696 CLPSL2Q6UWE3 100 aa14.07□□□□□ -0.16
DDX39A-215ENST00000590696 PRR34Q9NV39 138 aa14.07□□□□□ -0.16
DDX39A-215ENST00000590696 LINC00269Q8N2A0 174 aa14.06□□□□□ -0.16
DDX39A-215ENST00000590696 AP1S3Q96PC3 154 aa14.06□□□□□ -0.16
DDX39A-215ENST00000590696 TRBV25-1A0A075B6N4 114 aa14.05□□□□□ -0.16
DDX39A-215ENST00000590696 RPL35P42766 123 aaKnown RBP14.05□□□□□ -0.16
DDX39A-215ENST00000590696 SERTAD4-AS1Q5TG53 156 aa14.05□□□□□ -0.16
DDX39A-215ENST00000590696 DGAT2L7PQ6IED9 249 aa14.05□□□□□ -0.16
DDX39A-215ENST00000590696 A0A0D9SG52 128 aa14.04□□□□□ -0.16
DDX39A-215ENST00000590696 KANTRA0A1W2PQU2 76 aa14.04□□□□□ -0.16
DDX39A-215ENST00000590696 HMSDA8MTL9 139 aa14.04□□□□□ -0.16
DDX39A-215ENST00000590696 RPL37AP61513 92 aaKnown RBP14.04□□□□□ -0.16
DDX39A-215ENST00000590696 KRTAP26-1Q6PEX3 210 aa14.04□□□□□ -0.16
DDX39A-215ENST00000590696 C9orf163Q8N9P6 203 aa14.04□□□□□ -0.16
DDX39A-215ENST00000590696 BCL2L11O43521 198 aa14.03□□□□□ -0.16
DDX39A-215ENST00000590696 PKHD1L1Q86WI1 4243 aa14.03□□□□□ -0.16
DDX39A-215ENST00000590696 MGPP08493 103 aa14.02□□□□□ -0.17
DDX39A-215ENST00000590696 GZMBP10144 247 aa14.02□□□□□ -0.17
DDX39A-215ENST00000590696 IQCJQ1A5X6 159 aa14.02□□□□□ -0.17
DDX39A-215ENST00000590696 TPPP3Q9BW30 176 aa14.02□□□□□ -0.17
DDX39A-215ENST00000590696 HMCN2Q8NDA2 5059 aa14.02□□□□□ -0.17
DDX39A-215ENST00000590696 IGHV1-24A0A0C4DH33 117 aa14.01□□□□□ -0.17
DDX39A-215ENST00000590696 M0QY20 66 aa14.01□□□□□ -0.17
DDX39A-215ENST00000590696 CCL20P78556 96 aa14.01□□□□□ -0.17
DDX39A-215ENST00000590696 IGLC6P0CF74 106 aa14□□□□□ -0.17
DDX39A-215ENST00000590696 EIF5AP63241 154 aaKnown RBP14□□□□□ -0.17
DDX39A-215ENST00000590696 FER1L6-AS1Q8NA97 138 aa14□□□□□ -0.17
DDX39A-215ENST00000590696 C11orf52Q96A22 123 aa14□□□□□ -0.17
DDX39A-215ENST00000590696 DAZAP1Q96EP5 407 aaKnown RBP14□□□□□ -0.17
DDX39A-215ENST00000590696 MANBALQ9NQG1 85 aa14□□□□□ -0.17
DDX39A-215ENST00000590696 GNG13Q9P2W3 67 aa14□□□□□ -0.17
DDX39A-215ENST00000590696 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14□□□□□ -0.17
DDX39A-215ENST00000590696 IGLV10-54A0A075B6I4 117 aa13.99□□□□□ -0.17
DDX39A-215ENST00000590696 H7C1H1 209 aa13.99□□□□□ -0.17
DDX39A-215ENST00000590696 REG3AQ06141 175 aa13.99□□□□□ -0.17
DDX39A-215ENST00000590696 CENPWQ5EE01 88 aa13.99□□□□□ -0.17
DDX39A-215ENST00000590696 SUMO4Q6EEV6 95 aa13.99□□□□□ -0.17
DDX39A-215ENST00000590696 OR2D3Q8NGH3 330 aa13.99□□□□□ -0.17
DDX39A-215ENST00000590696 PANO1I0J062 215 aa13.98□□□□□ -0.17
DDX39A-215ENST00000590696 RPS20P60866 119 aaKnown RBP13.98□□□□□ -0.17
DDX39A-215ENST00000590696 CLRN3Q8NCR9 226 aa13.98□□□□□ -0.17
DDX39A-215ENST00000590696 HNRNPA3P51991 378 aaKnown RBP13.97□□□□□ -0.17
DDX39A-215ENST00000590696 NKX2-5P52952 324 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-215ENST00000590696 CACNG7P62955 275 aa13.97□□□□□ -0.17
DDX39A-215ENST00000590696 SDIM1Q6ZPB5 146 aa13.97□□□□□ -0.17
DDX39A-215ENST00000590696 C20orf203Q8NBC4 194 aa13.97□□□□□ -0.17
DDX39A-215ENST00000590696 RAB19A4D1S5 217 aa13.96□□□□□ -0.17
DDX39A-215ENST00000590696 C19orf71A6NCJ1 209 aa13.96□□□□□ -0.17
DDX39A-215ENST00000590696 RASL11AQ6T310 242 aa13.95□□□□□ -0.18
DDX39A-215ENST00000590696 TMEM243Q9BU79 118 aa13.95□□□□□ -0.18
DDX39A-215ENST00000590696 IGLV4-60A0A075B6I1 120 aa13.94□□□□□ -0.18
DDX39A-215ENST00000590696 TRAV8-4A0A0B4J246 113 aa13.94□□□□□ -0.18
DDX39A-215ENST00000590696 TRAV1-1A0A0B4J248 108 aa13.94□□□□□ -0.18
DDX39A-215ENST00000590696 A0A1B0GUV1 79 aa13.94□□□□□ -0.18
DDX39A-215ENST00000590696 P01737 135 aa13.94□□□□□ -0.18
DDX39A-215ENST00000590696 hDV102S1A0JD36 115 aa13.93□□□□□ -0.18
DDX39A-215ENST00000590696 F2Z2F3 143 aa13.93□□□□□ -0.18
DDX39A-215ENST00000590696 GNG4P50150 75 aa13.93□□□□□ -0.18
DDX39A-215ENST00000590696 CNBPP62633 177 aaKnown RBP13.93□□□□□ -0.18
DDX39A-215ENST00000590696 GFRA4Q9GZZ7 299 aa13.93□□□□□ -0.18
DDX39A-215ENST00000590696 XKRY2A2RUG3 117 aa13.92□□□□□ -0.18
DDX39A-215ENST00000590696 TRGC1P0CF51 173 aa13.92□□□□□ -0.18
DDX39A-215ENST00000590696 RAB5CP51148 216 aa13.92□□□□□ -0.18
DDX39A-215ENST00000590696 LYZL1Q6UWQ5 148 aa13.92□□□□□ -0.18
DDX39A-215ENST00000590696 SMIM12Q96EX1 92 aa13.92□□□□□ -0.18
DDX39A-215ENST00000590696 NIT2Q9NQR4 276 aa13.92□□□□□ -0.18
DDX39A-215ENST00000590696 TEX46H3BTG2 121 aa13.91□□□□□ -0.18
DDX39A-215ENST00000590696 NTF3P20783 257 aa13.91□□□□□ -0.18
DDX39A-215ENST00000590696 PGLYRP4Q96LB8 373 aa13.91□□□□□ -0.18
DDX39A-215ENST00000590696 DPH3P1Q9H4G8 78 aa13.91□□□□□ -0.18
DDX39A-215ENST00000590696 IFNA1P01562 189 aa13.9□□□□□ -0.18
DDX39A-215ENST00000590696 MEF2BQ02080 365 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-215ENST00000590696 PLA2G2DQ9UNK4 145 aa13.9□□□□□ -0.18
DDX39A-215ENST00000590696 UBE2L6O14933 153 aa13.89□□□□□ -0.19
DDX39A-215ENST00000590696 PDE6DO43924 150 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms