RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 COX11Q9Y6N1 276 aa11.34□□□□□ -0.59
RETREG3-210ENST00000590541 URGCP-MRPS24S4R325 110 aa11.34□□□□□ -0.59
RETREG3-210ENST00000590541 RPS20P60866 119 aaKnown RBP11.33□□□□□ -0.6
RETREG3-210ENST00000590541 RPL19P84098 196 aaKnown RBP11.33□□□□□ -0.6
RETREG3-210ENST00000590541 Q6ZNX1 250 aa11.33□□□□□ -0.6
RETREG3-210ENST00000590541 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.33□□□□□ -0.6
RETREG3-210ENST00000590541 OR10G8Q8NGN5 311 aa11.33□□□□□ -0.6
RETREG3-210ENST00000590541 OR10AG1Q8NH19 301 aa11.33□□□□□ -0.6
RETREG3-210ENST00000590541 BAALCQ8WXS3 180 aa11.33□□□□□ -0.6
RETREG3-210ENST00000590541 DAZAP1Q96EP5 407 aaKnown RBP11.33□□□□□ -0.6
RETREG3-210ENST00000590541 IGLV2-8P01709 118 aa11.32□□□□□ -0.6
RETREG3-210ENST00000590541 HNRNPA3P51991 378 aaKnown RBP11.32□□□□□ -0.6
RETREG3-210ENST00000590541 DERL1Q9BUN8 251 aa11.32□□□□□ -0.6
RETREG3-210ENST00000590541 XKRY2A2RUG3 117 aa11.31□□□□□ -0.6
RETREG3-210ENST00000590541 RBFOX3A6NFN3 312 aa11.31□□□□□ -0.6
RETREG3-210ENST00000590541 GNG4P50150 75 aa11.31□□□□□ -0.6
RETREG3-210ENST00000590541 UBE2D3P61077 147 aa11.31□□□□□ -0.6
RETREG3-210ENST00000590541 UBE2D2P62837 147 aa11.31□□□□□ -0.6
RETREG3-210ENST00000590541 ELOBQ15370 118 aa11.31□□□□□ -0.6
RETREG3-210ENST00000590541 ZNF56Q15929 161 aa11.31□□□□□ -0.6
RETREG3-210ENST00000590541 CENPWQ5EE01 88 aa11.31□□□□□ -0.6
RETREG3-210ENST00000590541 KCNIP4Q6PIL6 250 aa11.31□□□□□ -0.6
RETREG3-210ENST00000590541 RMI2Q96E14 147 aa11.31□□□□□ -0.6
RETREG3-210ENST00000590541 VAX2Q9UIW0 290 aa11.31□□□□□ -0.6
RETREG3-210ENST00000590541 LRP2P98164 4655 aa11.3□□□□□ -0.6
RETREG3-210ENST00000590541 SMIM17P0DL12 118 aa11.3□□□□□ -0.6
RETREG3-210ENST00000590541 MT1HL1P0DM35 61 aa11.3□□□□□ -0.6
RETREG3-210ENST00000590541 BCL2P10415 239 aa11.3□□□□□ -0.6
RETREG3-210ENST00000590541 AKAP14Q86UN6 197 aa11.3□□□□□ -0.6
RETREG3-210ENST00000590541 NIT1Q86X76 327 aa11.3□□□□□ -0.6
RETREG3-210ENST00000590541 TMEM97Q5BJF2 176 aa11.29□□□□□ -0.6
RETREG3-210ENST00000590541 DAZ4Q86SG3 579 aaKnown RBP11.29□□□□□ -0.6
RETREG3-210ENST00000590541 AP1S3Q96PC3 154 aa11.29□□□□□ -0.6
RETREG3-210ENST00000590541 DAZ3Q9NR90 486 aaKnown RBP11.29□□□□□ -0.6
RETREG3-210ENST00000590541 MED9Q9NWA0 146 aa11.29□□□□□ -0.6
RETREG3-210ENST00000590541 A0A087WX48 190 aa11.28□□□□□ -0.6
RETREG3-210ENST00000590541 C19orf71A6NCJ1 209 aa11.28□□□□□ -0.6
RETREG3-210ENST00000590541 F2Z2F3 143 aa11.28□□□□□ -0.6
RETREG3-210ENST00000590541 PKIAP61925 76 aa11.28□□□□□ -0.6
RETREG3-210ENST00000590541 FER1L6-AS1Q8NA97 138 aa11.28□□□□□ -0.6
RETREG3-210ENST00000590541 OR2D3Q8NGH3 330 aa11.28□□□□□ -0.6
RETREG3-210ENST00000590541 F5H697 171 aa11.27□□□□□ -0.61
RETREG3-210ENST00000590541 P01737 135 aa11.27□□□□□ -0.61
RETREG3-210ENST00000590541 IGLC6P0CF74 106 aa11.27□□□□□ -0.61
RETREG3-210ENST00000590541 RPL37AP61513 92 aaKnown RBP11.27□□□□□ -0.61
RETREG3-210ENST00000590541 CACNG7P62955 275 aa11.27□□□□□ -0.61
RETREG3-210ENST00000590541 Q8N976 141 aa11.27□□□□□ -0.61
RETREG3-210ENST00000590541 NEXN-AS1Q8NBZ9 246 aa11.27□□□□□ -0.61
RETREG3-210ENST00000590541 TRBV6-8A0A0A6YYG3 113 aa11.26□□□□□ -0.61
RETREG3-210ENST00000590541 RAB19A4D1S5 217 aa11.26□□□□□ -0.61
RETREG3-210ENST00000590541 BLOC1S1P78537 153 aa11.26□□□□□ -0.61
RETREG3-210ENST00000590541 Q0VG73 95 aa11.26□□□□□ -0.61
RETREG3-210ENST00000590541 KIF25-AS1Q9Y6Z4 181 aa11.26□□□□□ -0.61
RETREG3-210ENST00000590541 H7C1H1 209 aa11.25□□□□□ -0.61
RETREG3-210ENST00000590541 C9orf62Q8N4C0 152 aa11.25□□□□□ -0.61
RETREG3-210ENST00000590541 DNAJC30Q96LL9 226 aa11.25□□□□□ -0.61
RETREG3-210ENST00000590541 TRBV20OR9-2A0A075B6H5 130 aa11.24□□□□□ -0.61
RETREG3-210ENST00000590541 MUC21A0A0G2JKD1 596 aa11.24□□□□□ -0.61
RETREG3-210ENST00000590541 MUC21A0A140T8X8 626 aa11.24□□□□□ -0.61
RETREG3-210ENST00000590541 WDR73Q6P4I2 378 aa11.24□□□□□ -0.61
RETREG3-210ENST00000590541 KLK12Q9UKR0 248 aa11.24□□□□□ -0.61
RETREG3-210ENST00000590541 TRGC1P0CF51 173 aa11.23□□□□□ -0.61
RETREG3-210ENST00000590541 TPPP3Q9BW30 176 aa11.23□□□□□ -0.61
RETREG3-210ENST00000590541 TMEM262E9PQX1 116 aa11.22□□□□□ -0.61
RETREG3-210ENST00000590541 TMEM250H0YL14 139 aa11.22□□□□□ -0.61
RETREG3-210ENST00000590541 GZMBP10144 247 aa11.22□□□□□ -0.61
RETREG3-210ENST00000590541 SSTP61278 116 aa11.22□□□□□ -0.61
RETREG3-210ENST00000590541 ATRAIDQ6UW56 229 aa11.22□□□□□ -0.61
RETREG3-210ENST00000590541 TNXBP22105 4242 aa11.2□□□□□ -0.62
RETREG3-210ENST00000590541 IGKV2D-24A0A075B6R9 120 aa11.2□□□□□ -0.62
RETREG3-210ENST00000590541 NUDT10Q8NFP7 164 aa11.2□□□□□ -0.62
RETREG3-210ENST00000590541 LYPD6BQ8NI32 183 aa11.2□□□□□ -0.62
RETREG3-210ENST00000590541 UBE2WQ96B02 151 aa11.2□□□□□ -0.62
RETREG3-210ENST00000590541 NUDT11Q96G61 164 aa11.2□□□□□ -0.62
RETREG3-210ENST00000590541 hCG_2014768A0A024R1R8 64 aa11.19□□□□□ -0.62
RETREG3-210ENST00000590541 TRBV25-1A0A075B6N4 114 aa11.19□□□□□ -0.62
RETREG3-210ENST00000590541 M0QY20 66 aa11.19□□□□□ -0.62
RETREG3-210ENST00000590541 NDUFS6O75380 124 aaKnown RBP11.19□□□□□ -0.62
RETREG3-210ENST00000590541 MGPP08493 103 aa11.19□□□□□ -0.62
RETREG3-210ENST00000590541 LYZL1Q6UWQ5 148 aa11.19□□□□□ -0.62
RETREG3-210ENST00000590541 ALKAL2Q6UX46 152 aa11.19□□□□□ -0.62
RETREG3-210ENST00000590541 CHCHD5Q9BSY4 110 aa11.19□□□□□ -0.62
RETREG3-210ENST00000590541 DPH3P1Q9H4G8 78 aa11.19□□□□□ -0.62
RETREG3-210ENST00000590541 CRPP02741 224 aa11.18□□□□□ -0.62
RETREG3-210ENST00000590541 NTF3P20783 257 aa11.18□□□□□ -0.62
RETREG3-210ENST00000590541 CTRLP40313 264 aa11.18□□□□□ -0.62
RETREG3-210ENST00000590541 OCC1Q8TAD7 63 aa11.18□□□□□ -0.62
RETREG3-210ENST00000590541 C1orf43Q9BWL3 253 aa11.18□□□□□ -0.62
RETREG3-210ENST00000590541 CNFNQ9BYD5 112 aa11.18□□□□□ -0.62
RETREG3-210ENST00000590541 RPP21Q9H633 154 aaKnown RBP11.18□□□□□ -0.62
RETREG3-210ENST00000590541 ANGP03950 147 aaKnown RBP11.17□□□□□ -0.62
RETREG3-210ENST00000590541 IQCJQ1A5X6 159 aa11.17□□□□□ -0.62
RETREG3-210ENST00000590541 C14orf177Q52M58 125 aa11.17□□□□□ -0.62
RETREG3-210ENST00000590541 MPV17L2Q567V2 206 aa11.17□□□□□ -0.62
RETREG3-210ENST00000590541 RASL11AQ6T310 242 aa11.17□□□□□ -0.62
RETREG3-210ENST00000590541 NTM-AS1Q6ZSK4 140 aa11.17□□□□□ -0.62
RETREG3-210ENST00000590541 IGHV1-24A0A0C4DH33 117 aa11.16□□□□□ -0.62
RETREG3-210ENST00000590541 MIAQ16674 131 aa11.16□□□□□ -0.62
RETREG3-210ENST00000590541 SUMO4Q6EEV6 95 aa11.16□□□□□ -0.62
RETREG3-210ENST00000590541 Q6ZRU5 148 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms