RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 Q8N3U1 123 aa9.4□□□□□ -0.9
SAFB2-205ENST00000590000 FER1L6-AS1Q8NA97 138 aa9.4□□□□□ -0.9
SAFB2-205ENST00000590000 SMIM12Q96EX1 92 aa9.4□□□□□ -0.9
SAFB2-205ENST00000590000 BIN3Q9NQY0 253 aa9.4□□□□□ -0.9
SAFB2-205ENST00000590000 FAM229AH3BQW9 127 aa9.39□□□□□ -0.91
SAFB2-205ENST00000590000 KRTAP10-4P60372 401 aaPredicted RBP9.39□□□□□ -0.91
SAFB2-205ENST00000590000 LYZL1Q6UWQ5 148 aa9.39□□□□□ -0.91
SAFB2-205ENST00000590000 TMEM250H0YL14 139 aa9.38□□□□□ -0.91
SAFB2-205ENST00000590000 RAB4BP61018 213 aa9.38□□□□□ -0.91
SAFB2-205ENST00000590000 ZNF56Q15929 161 aa9.38□□□□□ -0.91
SAFB2-205ENST00000590000 Q8N814 137 aa9.38□□□□□ -0.91
SAFB2-205ENST00000590000 FAM210AQ96ND0 272 aa9.38□□□□□ -0.91
SAFB2-205ENST00000590000 KIF25-AS1Q9Y6Z4 181 aa9.38□□□□□ -0.91
SAFB2-205ENST00000590000 PKHD1L1Q86WI1 4243 aa9.37□□□□□ -0.91
SAFB2-205ENST00000590000 IBA57-AS1B1ANH7 110 aa9.37□□□□□ -0.91
SAFB2-205ENST00000590000 SRP19P09132 144 aaKnown RBP9.37□□□□□ -0.91
SAFB2-205ENST00000590000 Q6ZSA8 131 aa9.37□□□□□ -0.91
SAFB2-205ENST00000590000 XKRY2A2RUG3 117 aa9.36□□□□□ -0.91
SAFB2-205ENST00000590000 KRTAP29-1A8MX34 341 aaPredicted RBP9.36□□□□□ -0.91
SAFB2-205ENST00000590000 J3QL48 77 aa9.36□□□□□ -0.91
SAFB2-205ENST00000590000 SMIM17P0DL12 118 aa9.36□□□□□ -0.91
SAFB2-205ENST00000590000 CACNG7P62955 275 aa9.36□□□□□ -0.91
SAFB2-205ENST00000590000 RPL36AP83881 106 aaKnown RBP9.36□□□□□ -0.91
SAFB2-205ENST00000590000 LINC01556Q5JQF7 62 aa9.36□□□□□ -0.91
SAFB2-205ENST00000590000 TEX261Q6UWH6 196 aa9.36□□□□□ -0.91
SAFB2-205ENST00000590000 NEXN-AS1Q8NBZ9 246 aa9.36□□□□□ -0.91
SAFB2-205ENST00000590000 RPL36ALQ969Q0 106 aaKnown RBP9.36□□□□□ -0.91
SAFB2-205ENST00000590000 RPP21Q9H633 154 aaKnown RBP9.36□□□□□ -0.91
SAFB2-205ENST00000590000 TRBV7-3A0A075B6L6 115 aa9.35□□□□□ -0.91
SAFB2-205ENST00000590000 TRBV10-1A0A0K0K1A3 114 aa9.35□□□□□ -0.91
SAFB2-205ENST00000590000 F2Z2F3 143 aa9.35□□□□□ -0.91
SAFB2-205ENST00000590000 GATCO43716 136 aaKnown RBP9.35□□□□□ -0.91
SAFB2-205ENST00000590000 MGPP08493 103 aa9.35□□□□□ -0.91
SAFB2-205ENST00000590000 NTF3P20783 257 aa9.35□□□□□ -0.91
SAFB2-205ENST00000590000 UBE2D3P61077 147 aa9.35□□□□□ -0.91
SAFB2-205ENST00000590000 UBE2D2P62837 147 aa9.35□□□□□ -0.91
SAFB2-205ENST00000590000 LINC01620Q4KN68 170 aa9.35□□□□□ -0.91
SAFB2-205ENST00000590000 Q9HAA7 133 aa9.35□□□□□ -0.91
SAFB2-205ENST00000590000 ZNF727A8MUV8 499 aa9.34□□□□□ -0.91
SAFB2-205ENST00000590000 C9JQL5 133 aa9.34□□□□□ -0.91
SAFB2-205ENST00000590000 K7EP13 123 aa9.34□□□□□ -0.91
SAFB2-205ENST00000590000 SRSF3P84103 164 aaKnown RBP9.34□□□□□ -0.91
SAFB2-205ENST00000590000 NTN5Q8WTR8 489 aaPredicted RBP9.34□□□□□ -0.91
SAFB2-205ENST00000590000 AP1S3Q96PC3 154 aa9.34□□□□□ -0.91
SAFB2-205ENST00000590000 SMIM7Q9BQ49 75 aa9.34□□□□□ -0.91
SAFB2-205ENST00000590000 TWIST1Q15672 202 aa9.33□□□□□ -0.92
SAFB2-205ENST00000590000 DAZ4Q86SG3 579 aaKnown RBP9.33□□□□□ -0.92
SAFB2-205ENST00000590000 LINC00528Q8N1L1 170 aa9.33□□□□□ -0.92
SAFB2-205ENST00000590000 C10orf126Q8N4M7 172 aa9.33□□□□□ -0.92
SAFB2-205ENST00000590000 OR10G8Q8NGN5 311 aa9.33□□□□□ -0.92
SAFB2-205ENST00000590000 GTSF1Q8WW33 167 aa9.33□□□□□ -0.92
SAFB2-205ENST00000590000 DAZ3Q9NR90 486 aaKnown RBP9.33□□□□□ -0.92
SAFB2-205ENST00000590000 A0A087WWC5 75 aa9.32□□□□□ -0.92
SAFB2-205ENST00000590000 FOXA3P55318 350 aaPredicted RBP9.32□□□□□ -0.92
SAFB2-205ENST00000590000 SUMO4Q6EEV6 95 aa9.32□□□□□ -0.92
SAFB2-205ENST00000590000 PGLYRP4Q96LB8 373 aa9.32□□□□□ -0.92
SAFB2-205ENST00000590000 DNAJC30Q96LL9 226 aa9.32□□□□□ -0.92
SAFB2-205ENST00000590000 M0QY20 66 aa9.31□□□□□ -0.92
SAFB2-205ENST00000590000 LECT2O14960 151 aa9.31□□□□□ -0.92
SAFB2-205ENST00000590000 WDR73Q6P4I2 378 aa9.31□□□□□ -0.92
SAFB2-205ENST00000590000 FAM231DQ6ZW35 169 aa9.31□□□□□ -0.92
SAFB2-205ENST00000590000 LINC01551Q86U37 167 aa9.31□□□□□ -0.92
SAFB2-205ENST00000590000 TMEM262E9PQX1 116 aa9.3□□□□□ -0.92
SAFB2-205ENST00000590000 PSCAO43653 123 aa9.3□□□□□ -0.92
SAFB2-205ENST00000590000 NDUFS6O75380 124 aaKnown RBP9.3□□□□□ -0.92
SAFB2-205ENST00000590000 TRGC1P0CF51 173 aa9.3□□□□□ -0.92
SAFB2-205ENST00000590000 CTRLP40313 264 aa9.3□□□□□ -0.92
SAFB2-205ENST00000590000 TMEM241Q24JQ0 296 aa9.3□□□□□ -0.92
SAFB2-205ENST00000590000 NIT1Q86X76 327 aa9.3□□□□□ -0.92
SAFB2-205ENST00000590000 DEFB104AQ8WTQ1 72 aa9.3□□□□□ -0.92
SAFB2-205ENST00000590000 DPH3P1Q9H4G8 78 aa9.3□□□□□ -0.92
SAFB2-205ENST00000590000 A8MWL6 223 aa9.29□□□□□ -0.92
SAFB2-205ENST00000590000 PEA15Q15121 130 aa9.29□□□□□ -0.92
SAFB2-205ENST00000590000 NTM-AS1Q6ZSK4 140 aa9.29□□□□□ -0.92
SAFB2-205ENST00000590000 SCXQ7RTU7 201 aa9.29□□□□□ -0.92
SAFB2-205ENST00000590000 TRBV6-8A0A0A6YYG3 113 aa9.28□□□□□ -0.92
SAFB2-205ENST00000590000 CNFNQ9BYD5 112 aa9.28□□□□□ -0.92
SAFB2-205ENST00000590000 KLK12Q9UKR0 248 aa9.28□□□□□ -0.92
SAFB2-205ENST00000590000 URGCP-MRPS24S4R325 110 aa9.28□□□□□ -0.92
SAFB2-205ENST00000590000 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.27□□□□□ -0.93
SAFB2-205ENST00000590000 TRAV26-2A0A0B4J265 109 aa9.27□□□□□ -0.93
SAFB2-205ENST00000590000 RPL23P62829 140 aaKnown RBP9.27□□□□□ -0.93
SAFB2-205ENST00000590000 RASL11AQ6T310 242 aa9.27□□□□□ -0.93
SAFB2-205ENST00000590000 OSTCQ9NRP0 149 aa9.27□□□□□ -0.93
SAFB2-205ENST00000590000 A0A087WX48 190 aa9.26□□□□□ -0.93
SAFB2-205ENST00000590000 H7C1H1 209 aa9.26□□□□□ -0.93
SAFB2-205ENST00000590000 ADIRFQ15847 76 aa9.26□□□□□ -0.93
SAFB2-205ENST00000590000 FAM74A3Q4VXF1 159 aa9.26□□□□□ -0.93
SAFB2-205ENST00000590000 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.26□□□□□ -0.93
SAFB2-205ENST00000590000 GATD1Q8NB37 220 aa9.26□□□□□ -0.93
SAFB2-205ENST00000590000 ISOC2Q96AB3 205 aa9.26□□□□□ -0.93
SAFB2-205ENST00000590000 CHCHD5Q9BSY4 110 aa9.26□□□□□ -0.93
SAFB2-205ENST00000590000 V9GYV3 84 aa9.26□□□□□ -0.93
SAFB2-205ENST00000590000 PLA2G1BP04054 148 aaKnown RBP9.25□□□□□ -0.93
SAFB2-205ENST00000590000 HNRNPA3P51991 378 aaKnown RBP9.25□□□□□ -0.93
SAFB2-205ENST00000590000 GAGE6Q13070 117 aa9.25□□□□□ -0.93
SAFB2-205ENST00000590000 CT83Q5H943 113 aa9.25□□□□□ -0.93
SAFB2-205ENST00000590000 KCNIP4Q6PIL6 250 aa9.25□□□□□ -0.93
SAFB2-205ENST00000590000 C15orf54Q8N8G6 183 aa9.25□□□□□ -0.93
SAFB2-205ENST00000590000 TSKUQ8WUA8 353 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms