RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 A0A087WWL8 130 aa9.4□□□□□ -0.9
ERCC1-208ENST00000589165 TRAV8-6A0A0B4J262 113 aa9.4□□□□□ -0.9
ERCC1-208ENST00000589165 PHOX2AO14813 284 aa9.4□□□□□ -0.9
ERCC1-208ENST00000589165 CT83Q5H943 113 aa9.4□□□□□ -0.9
ERCC1-208ENST00000589165 LELP1Q5T871 98 aa9.4□□□□□ -0.9
ERCC1-208ENST00000589165 FAM74A4Q5TZK3 123 aa9.4□□□□□ -0.9
ERCC1-208ENST00000589165 NFE4Q86UQ8 179 aa9.4□□□□□ -0.9
ERCC1-208ENST00000589165 C14orf178Q8N769 122 aaPredicted RBP9.4□□□□□ -0.9
ERCC1-208ENST00000589165 IGHV3-38A0A0C4DH36 116 aa9.4□□□□□ -0.91
ERCC1-208ENST00000589165 LINC01556Q5JQF7 62 aa9.4□□□□□ -0.91
ERCC1-208ENST00000589165 C10orf126Q8N4M7 172 aa9.4□□□□□ -0.91
ERCC1-208ENST00000589165 OR10AG1Q8NH19 301 aa9.4□□□□□ -0.91
ERCC1-208ENST00000589165 DAZAP1Q96EP5 407 aaKnown RBP9.4□□□□□ -0.91
ERCC1-208ENST00000589165 TRBV10-1A0A0K0K1A3 114 aa9.39□□□□□ -0.91
ERCC1-208ENST00000589165 GAGE12JA6NER3 117 aa9.39□□□□□ -0.91
ERCC1-208ENST00000589165 TRGC2P03986 189 aa9.39□□□□□ -0.91
ERCC1-208ENST00000589165 GAGE1Q13065 139 aa9.39□□□□□ -0.91
ERCC1-208ENST00000589165 GAGE4Q13068 117 aa9.39□□□□□ -0.91
ERCC1-208ENST00000589165 GAGE5Q13069 117 aa9.39□□□□□ -0.91
ERCC1-208ENST00000589165 GAGE13Q4V321 117 aa9.39□□□□□ -0.91
ERCC1-208ENST00000589165 OR10J3Q5JRS4 329 aa9.39□□□□□ -0.91
ERCC1-208ENST00000589165 RPP21Q9H633 154 aaKnown RBP9.39□□□□□ -0.91
ERCC1-208ENST00000589165 MSRB1Q9NZV6 116 aa9.39□□□□□ -0.91
ERCC1-208ENST00000589165 Q9UF83 564 aa9.39□□□□□ -0.91
ERCC1-208ENST00000589165 RPS20P60866 119 aaKnown RBP9.38□□□□□ -0.91
ERCC1-208ENST00000589165 TSKUQ8WUA8 353 aa9.38□□□□□ -0.91
ERCC1-208ENST00000589165 LRP1BQ9NZR2 4599 aa9.37□□□□□ -0.91
ERCC1-208ENST00000589165 FAM231BA6NCW3 169 aa9.37□□□□□ -0.91
ERCC1-208ENST00000589165 P01737 135 aa9.37□□□□□ -0.91
ERCC1-208ENST00000589165 IGLC6P0CF74 106 aa9.37□□□□□ -0.91
ERCC1-208ENST00000589165 RAB4BP61018 213 aa9.37□□□□□ -0.91
ERCC1-208ENST00000589165 COX19Q49B96 90 aa9.37□□□□□ -0.91
ERCC1-208ENST00000589165 SPANXN1Q5VSR9 72 aa9.37□□□□□ -0.91
ERCC1-208ENST00000589165 OR2D3Q8NGH3 330 aa9.37□□□□□ -0.91
ERCC1-208ENST00000589165 GFRA4Q9GZZ7 299 aa9.37□□□□□ -0.91
ERCC1-208ENST00000589165 TNFRSF18Q9Y5U5 241 aa9.37□□□□□ -0.91
ERCC1-208ENST00000589165 MUC21A0A0G2JKD1 596 aa9.36□□□□□ -0.91
ERCC1-208ENST00000589165 MUC21A0A140T8X8 626 aa9.36□□□□□ -0.91
ERCC1-208ENST00000589165 A8MWL6 223 aa9.36□□□□□ -0.91
ERCC1-208ENST00000589165 FRZBQ92765 325 aa9.36□□□□□ -0.91
ERCC1-208ENST00000589165 NAT8BQ9UHF3 227 aa9.36□□□□□ -0.91
ERCC1-208ENST00000589165 XKRY2A2RUG3 117 aa9.35□□□□□ -0.91
ERCC1-208ENST00000589165 C5orf52A6NGY3 159 aa9.35□□□□□ -0.91
ERCC1-208ENST00000589165 HIST1H2BKO60814 126 aa9.35□□□□□ -0.91
ERCC1-208ENST00000589165 S100A6P06703 90 aa9.35□□□□□ -0.91
ERCC1-208ENST00000589165 HIST1H2BJP06899 126 aa9.35□□□□□ -0.91
ERCC1-208ENST00000589165 HIST1H2BOP23527 126 aa9.35□□□□□ -0.91
ERCC1-208ENST00000589165 HIST1H2BBP33778 126 aa9.35□□□□□ -0.91
ERCC1-208ENST00000589165 HIST1H2BDP58876 126 aa9.35□□□□□ -0.91
ERCC1-208ENST00000589165 HIST1H2BCP62807 126 aa9.35□□□□□ -0.91
ERCC1-208ENST00000589165 HIST2H2BEQ16778 126 aa9.35□□□□□ -0.91
ERCC1-208ENST00000589165 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.35□□□□□ -0.91
ERCC1-208ENST00000589165 RASL11AQ6T310 242 aa9.35□□□□□ -0.91
ERCC1-208ENST00000589165 HIST1H2BHQ93079 126 aa9.35□□□□□ -0.91
ERCC1-208ENST00000589165 HIST1H2BNQ99877 126 aa9.35□□□□□ -0.91
ERCC1-208ENST00000589165 HIST1H2BMQ99879 126 aa9.35□□□□□ -0.91
ERCC1-208ENST00000589165 RYR1P21817 5038 aa9.35□□□□□ -0.91
ERCC1-208ENST00000589165 C16orf90A8MZG2 172 aa9.34□□□□□ -0.91
ERCC1-208ENST00000589165 IBA57-AS1B1ANH7 110 aa9.34□□□□□ -0.91
ERCC1-208ENST00000589165 TRGC1P0CF51 173 aa9.34□□□□□ -0.91
ERCC1-208ENST00000589165 GZMBP10144 247 aa9.34□□□□□ -0.91
ERCC1-208ENST00000589165 SPATA12Q7Z6I5 190 aa9.34□□□□□ -0.91
ERCC1-208ENST00000589165 FER1L6-AS1Q8NA97 138 aa9.34□□□□□ -0.91
ERCC1-208ENST00000589165 NUP35Q8NFH5 326 aa9.34□□□□□ -0.91
ERCC1-208ENST00000589165 GNB1LQ9BYB4 327 aa9.34□□□□□ -0.91
ERCC1-208ENST00000589165 KIF25-AS1Q9Y6Z4 181 aa9.34□□□□□ -0.91
ERCC1-208ENST00000589165 TRBV7-3A0A075B6L6 115 aa9.34□□□□□ -0.91
ERCC1-208ENST00000589165 F2Z2F3 143 aa9.34□□□□□ -0.91
ERCC1-208ENST00000589165 FOXA3P55318 350 aaPredicted RBP9.34□□□□□ -0.91
ERCC1-208ENST00000589165 UBE2D3P61077 147 aa9.34□□□□□ -0.91
ERCC1-208ENST00000589165 UBE2D2P62837 147 aa9.34□□□□□ -0.91
ERCC1-208ENST00000589165 CACNG7P62955 275 aa9.34□□□□□ -0.91
ERCC1-208ENST00000589165 RPL36AP83881 106 aaKnown RBP9.34□□□□□ -0.91
ERCC1-208ENST00000589165 WDR73Q6P4I2 378 aa9.34□□□□□ -0.91
ERCC1-208ENST00000589165 ATP5L2Q7Z4Y8 100 aa9.34□□□□□ -0.91
ERCC1-208ENST00000589165 RPL36ALQ969Q0 106 aaKnown RBP9.34□□□□□ -0.91
ERCC1-208ENST00000589165 AP1S3Q96PC3 154 aa9.34□□□□□ -0.91
ERCC1-208ENST00000589165 TRAPPC1Q9Y5R8 145 aa9.34□□□□□ -0.91
ERCC1-208ENST00000589165 HIGD1CA8MV81 97 aa9.33□□□□□ -0.92
ERCC1-208ENST00000589165 MT-ND6P03923 174 aa9.33□□□□□ -0.92
ERCC1-208ENST00000589165 SSTP61278 116 aa9.33□□□□□ -0.92
ERCC1-208ENST00000589165 SNRPEP62304 92 aaKnown RBP9.33□□□□□ -0.92
ERCC1-208ENST00000589165 FABP9Q0Z7S8 132 aa9.33□□□□□ -0.92
ERCC1-208ENST00000589165 ZNF56Q15929 161 aa9.33□□□□□ -0.92
ERCC1-208ENST00000589165 TPPP3Q9BW30 176 aa9.33□□□□□ -0.92
ERCC1-208ENST00000589165 DNAH5Q8TE73 4624 aa9.32□□□□□ -0.92
ERCC1-208ENST00000589165 IGHV3-30P01768 117 aa9.32□□□□□ -0.92
ERCC1-208ENST00000589165 IGHV3-33P01772 117 aa9.32□□□□□ -0.92
ERCC1-208ENST00000589165 SMIM17P0DL12 118 aa9.32□□□□□ -0.92
ERCC1-208ENST00000589165 IGHV3-30-3P0DP02 117 aa9.32□□□□□ -0.92
ERCC1-208ENST00000589165 IGHV3-30-5P0DP03 117 aa9.32□□□□□ -0.92
ERCC1-208ENST00000589165 KRTAP10-2P60368 255 aa9.32□□□□□ -0.92
ERCC1-208ENST00000589165 LAGE3Q14657 143 aa9.32□□□□□ -0.92
ERCC1-208ENST00000589165 TMEM136Q6ZRR5 245 aa9.32□□□□□ -0.92
ERCC1-208ENST00000589165 GTSF1Q8WW33 167 aa9.32□□□□□ -0.92
ERCC1-208ENST00000589165 A0A087WTM6 91 aa9.31□□□□□ -0.92
ERCC1-208ENST00000589165 A0A1B0GXF2 115 aa9.31□□□□□ -0.92
ERCC1-208ENST00000589165 F5H697 171 aa9.31□□□□□ -0.92
ERCC1-208ENST00000589165 EREGO14944 169 aa9.31□□□□□ -0.92
ERCC1-208ENST00000589165 COA6Q5JTJ3 125 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms