RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, human

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD3-205	ENST00000589064	KRTAP10-1	P60331	282 aa		13.81	□□□□□ -0.2
MBD3-205	ENST00000589064	TOR2A	Q5JU69	321 aa		13.81	□□□□□ -0.2
MBD3-205	ENST00000589064	OCC1	Q8TAD7	63 aa		13.8	□□□□□ -0.2
MBD3-205	ENST00000589064	CACNG7	P62955	275 aa		13.8	□□□□□ -0.2
MBD3-205	ENST00000589064	LYZL1	Q6UWQ5	148 aa		13.8	□□□□□ -0.2
MBD3-205	ENST00000589064	KLK12	Q9UKR0	248 aa		13.8	□□□□□ -0.2
MBD3-205	ENST00000589064		A0A087WX48	190 aa		13.79	□□□□□ -0.2
MBD3-205	ENST00000589064	TRBV6-8	A0A0A6YYG3	113 aa		13.79	□□□□□ -0.2
MBD3-205	ENST00000589064	TMEM262	E9PQX1	116 aa		13.79	□□□□□ -0.2
MBD3-205	ENST00000589064		F2Z2F3	143 aa		13.79	□□□□□ -0.2
MBD3-205	ENST00000589064	IFITM2	Q01629	132 aa		13.79	□□□□□ -0.2
MBD3-205	ENST00000589064	DNAJC30	Q96LL9	226 aa		13.79	□□□□□ -0.2
MBD3-205	ENST00000589064		K7EN84	100 aa		13.78	□□□□□ -0.2
MBD3-205	ENST00000589064	MGP	P08493	103 aa		13.78	□□□□□ -0.2
MBD3-205	ENST00000589064	GCSH	P23434	173 aa		13.78	□□□□□ -0.2
MBD3-205	ENST00000589064		Q8N1X5	172 aa		13.78	□□□□□ -0.2
MBD3-205	ENST00000589064		Q8N814	137 aa		13.78	□□□□□ -0.2
MBD3-205	ENST00000589064	RNASE7	Q9H1E1	156 aa	Known RBP	13.78	□□□□□ -0.2
MBD3-205	ENST00000589064	ABCA13	Q86UQ4	5058 aa		13.77	□□□□□ -0.2
MBD3-205	ENST00000589064	IGLV5-52	A0A0A0MRZ9	124 aa		13.77	□□□□□ -0.21
MBD3-205	ENST00000589064	KCNIP4	Q6PIL6	250 aa		13.77	□□□□□ -0.21
MBD3-205	ENST00000589064	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	13.77	□□□□□ -0.21
MBD3-205	ENST00000589064	NTF3	P20783	257 aa		13.76	□□□□□ -0.21
MBD3-205	ENST00000589064	WFDC2	Q14508	124 aa		13.76	□□□□□ -0.21
MBD3-205	ENST00000589064	TMEM250	H0YL14	139 aa		13.75	□□□□□ -0.21
MBD3-205	ENST00000589064		M0QY20	66 aa		13.75	□□□□□ -0.21
MBD3-205	ENST00000589064	XG	P55808	180 aa		13.75	□□□□□ -0.21
MBD3-205	ENST00000589064	ELOB	Q15370	118 aa		13.75	□□□□□ -0.21
MBD3-205	ENST00000589064	NTN5	Q8WTR8	489 aa	Predicted RBP	13.75	□□□□□ -0.21
MBD3-205	ENST00000589064	UBE2W	Q96B02	151 aa		13.75	□□□□□ -0.21
MBD3-205	ENST00000589064	FAM210A	Q96ND0	272 aa		13.75	□□□□□ -0.21
MBD3-205	ENST00000589064	CHCHD7	Q9BUK0	85 aa		13.75	□□□□□ -0.21
MBD3-205	ENST00000589064	RPP21	Q9H633	154 aa	Known RBP	13.75	□□□□□ -0.21
MBD3-205	ENST00000589064	LECT2	O14960	151 aa		13.74	□□□□□ -0.21
MBD3-205	ENST00000589064	CEBPG	P53567	150 aa		13.74	□□□□□ -0.21
MBD3-205	ENST00000589064	RAB14	P61106	215 aa		13.74	□□□□□ -0.21
MBD3-205	ENST00000589064	SUMO4	Q6EEV6	95 aa		13.74	□□□□□ -0.21
MBD3-205	ENST00000589064	NTM-AS1	Q6ZSK4	140 aa		13.74	□□□□□ -0.21
MBD3-205	ENST00000589064	EIF5A2	Q9GZV4	153 aa	Known RBP	13.74	□□□□□ -0.21
MBD3-205	ENST00000589064	IGKV2D-24	A0A075B6R9	120 aa		13.74	□□□□□ -0.21
MBD3-205	ENST00000589064	WDR73	Q6P4I2	378 aa		13.74	□□□□□ -0.21
MBD3-205	ENST00000589064	BAALC	Q8WXS3	180 aa		13.74	□□□□□ -0.21
MBD3-205	ENST00000589064	RMI2	Q96E14	147 aa		13.74	□□□□□ -0.21
MBD3-205	ENST00000589064	CHCHD5	Q9BSY4	110 aa		13.74	□□□□□ -0.21
MBD3-205	ENST00000589064	COX11	Q9Y6N1	276 aa		13.74	□□□□□ -0.21
MBD3-205	ENST00000589064	TRGC1	P0CF51	173 aa		13.73	□□□□□ -0.21
MBD3-205	ENST00000589064		H7C1H1	209 aa		13.72	□□□□□ -0.21
MBD3-205	ENST00000589064	CTRL	P40313	264 aa		13.72	□□□□□ -0.21
MBD3-205	ENST00000589064	TMEM97	Q5BJF2	176 aa		13.72	□□□□□ -0.21
MBD3-205	ENST00000589064	TWIST1	Q15672	202 aa		13.71	□□□□□ -0.21
MBD3-205	ENST00000589064	MPV17L2	Q567V2	206 aa		13.71	□□□□□ -0.21
MBD3-205	ENST00000589064	C15orf54	Q8N8G6	183 aa		13.71	□□□□□ -0.21
MBD3-205	ENST00000589064	DPH3P1	Q9H4G8	78 aa		13.71	□□□□□ -0.21
MBD3-205	ENST00000589064	RASL11A	Q6T310	242 aa		13.7	□□□□□ -0.22
MBD3-205	ENST00000589064	GATC	O43716	136 aa	Known RBP	13.69	□□□□□ -0.22
MBD3-205	ENST00000589064	CLLU1	Q5K131	121 aa		13.69	□□□□□ -0.22
MBD3-205	ENST00000589064	ATRAID	Q6UW56	229 aa		13.69	□□□□□ -0.22
MBD3-205	ENST00000589064	ENHO	Q6UWT2	76 aa		13.69	□□□□□ -0.22
MBD3-205	ENST00000589064		Q8N976	141 aa		13.69	□□□□□ -0.22
MBD3-205	ENST00000589064	GTSF1	Q8WW33	167 aa		13.69	□□□□□ -0.22
MBD3-205	ENST00000589064	ANG	P03950	147 aa	Known RBP	13.68	□□□□□ -0.22
MBD3-205	ENST00000589064		Q0VG73	95 aa		13.68	□□□□□ -0.22
MBD3-205	ENST00000589064	GAGE6	Q13070	117 aa		13.68	□□□□□ -0.22
MBD3-205	ENST00000589064	CNFN	Q9BYD5	112 aa		13.68	□□□□□ -0.22
MBD3-205	ENST00000589064	TRBV25-1	A0A075B6N4	114 aa		13.67	□□□□□ -0.22
MBD3-205	ENST00000589064	FAM231D	Q6ZW35	169 aa		13.67	□□□□□ -0.22
MBD3-205	ENST00000589064	NIT2	Q9NQR4	276 aa		13.67	□□□□□ -0.22
MBD3-205	ENST00000589064	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	13.67	□□□□□ -0.22
MBD3-205	ENST00000589064	NDUFS6	O75380	124 aa	Known RBP	13.67	□□□□□ -0.22
MBD3-205	ENST00000589064	PKIA	P61925	76 aa		13.67	□□□□□ -0.22
MBD3-205	ENST00000589064	SMIM7	Q9BQ49	75 aa		13.67	□□□□□ -0.22
MBD3-205	ENST00000589064	IGHV1-24	A0A0C4DH33	117 aa		13.66	□□□□□ -0.22
MBD3-205	ENST00000589064	SRP19	P09132	144 aa	Known RBP	13.66	□□□□□ -0.22
MBD3-205	ENST00000589064	RBX1	P62877	108 aa		13.66	□□□□□ -0.22
MBD3-205	ENST00000589064	HAMP	P81172	84 aa		13.66	□□□□□ -0.22
MBD3-205	ENST00000589064	SRSF3	P84103	164 aa	Known RBP	13.66	□□□□□ -0.22
MBD3-205	ENST00000589064	IQCJ	Q1A5X6	159 aa		13.66	□□□□□ -0.22
MBD3-205	ENST00000589064	DEFB104A	Q8WTQ1	72 aa		13.66	□□□□□ -0.22
MBD3-205	ENST00000589064		A8MWL6	223 aa		13.65	□□□□□ -0.22
MBD3-205	ENST00000589064	CRP	P02741	224 aa		13.65	□□□□□ -0.22
MBD3-205	ENST00000589064	FOXA3	P55318	350 aa	Predicted RBP	13.65	□□□□□ -0.22
MBD3-205	ENST00000589064	PEA15	Q15121	130 aa		13.65	□□□□□ -0.22
MBD3-205	ENST00000589064	PGLYRP4	Q96LB8	373 aa		13.65	□□□□□ -0.22
MBD3-205	ENST00000589064	C1orf43	Q9BWL3	253 aa		13.65	□□□□□ -0.22
MBD3-205	ENST00000589064	EPM2A	B3EWF7	344 aa		13.64	□□□□□ -0.23
MBD3-205	ENST00000589064		C9JQL5	133 aa		13.64	□□□□□ -0.23
MBD3-205	ENST00000589064	GATD1	Q8NB37	220 aa		13.64	□□□□□ -0.23
MBD3-205	ENST00000589064	FAM30A	Q9NZY2	134 aa		13.64	□□□□□ -0.23
MBD3-205	ENST00000589064	TRAV26-2	A0A0B4J265	109 aa		13.63	□□□□□ -0.23
MBD3-205	ENST00000589064	ZNF727	A8MUV8	499 aa		13.63	□□□□□ -0.23
MBD3-205	ENST00000589064	SMR3B	P02814	79 aa	Predicted RBP	13.63	□□□□□ -0.23
MBD3-205	ENST00000589064	LINC01551	Q86U37	167 aa		13.63	□□□□□ -0.23
MBD3-205	ENST00000589064	TMEM70	Q9BUB7	260 aa		13.63	□□□□□ -0.23
MBD3-205	ENST00000589064	SMIM15	Q7Z3B0	74 aa		13.62	□□□□□ -0.23
MBD3-205	ENST00000589064	SMDT1	Q9H4I9	107 aa		13.62	□□□□□ -0.23
MBD3-205	ENST00000589064	CLPSL2	Q6UWE3	100 aa		13.61	□□□□□ -0.23
MBD3-205	ENST00000589064	LINC00269	Q8N2A0	174 aa		13.61	□□□□□ -0.23
MBD3-205	ENST00000589064	CT83	Q5H943	113 aa		13.61	□□□□□ -0.23
MBD3-205	ENST00000589064	TMEM243	Q9BU79	118 aa		13.61	□□□□□ -0.23
MBD3-205	ENST00000589064	MIA	Q16674	131 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms