RNA–Protein interactions for RNA: ENST00000589039.5

GCDH-209, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-209ENST00000589039 GAGE12JA6NER3 117 aa10.71□□□□□ -0.69
GCDH-209ENST00000589039 RPL36AP83881 106 aaKnown RBP10.71□□□□□ -0.69
GCDH-209ENST00000589039 GAGE1Q13065 139 aa10.71□□□□□ -0.69
GCDH-209ENST00000589039 GAGE4Q13068 117 aa10.71□□□□□ -0.69
GCDH-209ENST00000589039 GAGE5Q13069 117 aa10.71□□□□□ -0.69
GCDH-209ENST00000589039 COX19Q49B96 90 aa10.71□□□□□ -0.69
GCDH-209ENST00000589039 GAGE13Q4V321 117 aa10.71□□□□□ -0.69
GCDH-209ENST00000589039 RPL36ALQ969Q0 106 aaKnown RBP10.71□□□□□ -0.69
GCDH-209ENST00000589039 MRAP2Q96G30 205 aa10.71□□□□□ -0.69
GCDH-209ENST00000589039 DNAJC30Q96LL9 226 aa10.71□□□□□ -0.69
GCDH-209ENST00000589039 SMCO4Q9NRQ5 59 aa10.71□□□□□ -0.69
GCDH-209ENST00000589039 TRBV7-3A0A075B6L6 115 aa10.7□□□□□ -0.7
GCDH-209ENST00000589039 TRBV24-1A0A075B6N3 115 aa10.7□□□□□ -0.7
GCDH-209ENST00000589039 ATP6V1G1O75348 118 aa10.7□□□□□ -0.7
GCDH-209ENST00000589039 S100A1P23297 94 aa10.7□□□□□ -0.7
GCDH-209ENST00000589039 MRPL51Q4U2R6 128 aaKnown RBP10.7□□□□□ -0.7
GCDH-209ENST00000589039 TMEM136Q6ZRR5 245 aa10.7□□□□□ -0.7
GCDH-209ENST00000589039 NEGR1Q7Z3B1 354 aa10.7□□□□□ -0.7
GCDH-209ENST00000589039 ZNRF2Q8NHG8 242 aa10.7□□□□□ -0.7
GCDH-209ENST00000589039 NIT2Q9NQR4 276 aa10.7□□□□□ -0.7
GCDH-209ENST00000589039 TGIF2-C20orf24A0A0A6YYL0 155 aa10.69□□□□□ -0.7
GCDH-209ENST00000589039 CBLN2Q8IUK8 224 aa10.69□□□□□ -0.7
GCDH-209ENST00000589039 YPEL4Q96NS1 127 aa10.69□□□□□ -0.7
GCDH-209ENST00000589039 RYR3Q15413 4870 aa10.68□□□□□ -0.7
GCDH-209ENST00000589039 UBE2D3P61077 147 aa10.68□□□□□ -0.7
GCDH-209ENST00000589039 UBE2D2P62837 147 aa10.68□□□□□ -0.7
GCDH-209ENST00000589039 ATP6V0E2Q8NHE4 81 aa10.68□□□□□ -0.7
GCDH-209ENST00000589039 GNB1LQ9BYB4 327 aa10.68□□□□□ -0.7
GCDH-209ENST00000589039 TNFRSF18Q9Y5U5 241 aa10.68□□□□□ -0.7
GCDH-209ENST00000589039 SACSQ9NZJ4 4579 aa10.68□□□□□ -0.7
GCDH-209ENST00000589039 GAS8-AS1O95177 125 aa10.67□□□□□ -0.7
GCDH-209ENST00000589039 HLA-DQA1P01909 254 aa10.67□□□□□ -0.7
GCDH-209ENST00000589039 RPL39LQ96EH5 51 aaKnown RBP10.67□□□□□ -0.7
GCDH-209ENST00000589039 TRBV6-5A0A0K0K1A5 114 aa10.66□□□□□ -0.7
GCDH-209ENST00000589039 SMKR1H3BMG3 65 aa10.66□□□□□ -0.7
GCDH-209ENST00000589039 NCR2O95944 276 aa10.66□□□□□ -0.7
GCDH-209ENST00000589039 PPP1R17O96001 155 aa10.66□□□□□ -0.7
GCDH-209ENST00000589039 PPBPP02775 128 aa10.66□□□□□ -0.7
GCDH-209ENST00000589039 MT-ND6P03923 174 aa10.66□□□□□ -0.7
GCDH-209ENST00000589039 CKS2P33552 79 aa10.66□□□□□ -0.7
GCDH-209ENST00000589039 CCL18P55774 89 aa10.66□□□□□ -0.7
GCDH-209ENST00000589039 TIRAPP58753 221 aa10.66□□□□□ -0.7
GCDH-209ENST00000589039 ESRGQ1W209 222 aa10.66□□□□□ -0.7
GCDH-209ENST00000589039 OR10J3Q5JRS4 329 aa10.66□□□□□ -0.7
GCDH-209ENST00000589039 LYPD5Q6UWN5 251 aa10.66□□□□□ -0.7
GCDH-209ENST00000589039 GTSF1LQ9H1H1 148 aa10.66□□□□□ -0.7
GCDH-209ENST00000589039 VPS13DQ5THJ4 4388 aa10.66□□□□□ -0.7
GCDH-209ENST00000589039 D6R8Y8 96 aa10.65□□□□□ -0.7
GCDH-209ENST00000589039 RPS10P46783 165 aaKnown RBP10.65□□□□□ -0.7
GCDH-209ENST00000589039 LGALS9CQ6DKI2 356 aa10.65□□□□□ -0.7
GCDH-209ENST00000589039 DAZ4Q86SG3 579 aaKnown RBP10.65□□□□□ -0.7
GCDH-209ENST00000589039 NRACQ8N912 160 aa10.65□□□□□ -0.7
GCDH-209ENST00000589039 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.65□□□□□ -0.7
GCDH-209ENST00000589039 DAZ3Q9NR90 486 aaKnown RBP10.65□□□□□ -0.7
GCDH-209ENST00000589039 ORMDL3Q8N138 153 aa10.64□□□□□ -0.71
GCDH-209ENST00000589039 LINC00588Q9Y4M8 146 aa10.64□□□□□ -0.71
GCDH-209ENST00000589039 DNAH6Q9C0G6 4158 aa10.63□□□□□ -0.71
GCDH-209ENST00000589039 SCO1O75880 301 aa10.63□□□□□ -0.71
GCDH-209ENST00000589039 APCSP02743 223 aa10.63□□□□□ -0.71
GCDH-209ENST00000589039 UBE2DNLQ8IWF7 75 aa10.63□□□□□ -0.71
GCDH-209ENST00000589039 LINC00476Q8WZB0 136 aa10.63□□□□□ -0.71
GCDH-209ENST00000589039 ST20Q9HBF5 79 aa10.63□□□□□ -0.71
GCDH-209ENST00000589039 MRPS16Q9Y3D3 137 aaKnown RBP10.63□□□□□ -0.71
GCDH-209ENST00000589039 IGHV3-38A0A0C4DH36 116 aa10.62□□□□□ -0.71
GCDH-209ENST00000589039 SDHAF1A6NFY7 115 aa10.62□□□□□ -0.71
GCDH-209ENST00000589039 PHOX2AO14813 284 aa10.62□□□□□ -0.71
GCDH-209ENST00000589039 TMEM97Q5BJF2 176 aa10.62□□□□□ -0.71
GCDH-209ENST00000589039 PRELID3AQ96N28 172 aa10.62□□□□□ -0.71
GCDH-209ENST00000589039 UPK3BQ9BT76 320 aa10.62□□□□□ -0.71
GCDH-209ENST00000589039 MRPL18Q9H0U6 180 aaKnown RBP10.62□□□□□ -0.71
GCDH-209ENST00000589039 LAMTOR2Q9Y2Q5 125 aa10.62□□□□□ -0.71
GCDH-209ENST00000589039 TNFRSF6BO95407 300 aa10.61□□□□□ -0.71
GCDH-209ENST00000589039 NPYP01303 97 aa10.61□□□□□ -0.71
GCDH-209ENST00000589039 POLR2KP53803 58 aaKnown RBP10.61□□□□□ -0.71
GCDH-209ENST00000589039 SUMO2P61956 95 aaKnown RBP10.61□□□□□ -0.71
GCDH-209ENST00000589039 LELP1Q5T871 98 aa10.61□□□□□ -0.71
GCDH-209ENST00000589039 C20orf78Q9BR46 151 aa10.61□□□□□ -0.71
GCDH-209ENST00000589039 TMEM70Q9BUB7 260 aa10.61□□□□□ -0.71
GCDH-209ENST00000589039 TRAPPC1Q9Y5R8 145 aa10.61□□□□□ -0.71
GCDH-209ENST00000589039 FABP9Q0Z7S8 132 aa10.6□□□□□ -0.71
GCDH-209ENST00000589039 KIAA1644Q3SXP7 199 aa10.6□□□□□ -0.71
GCDH-209ENST00000589039 TRBV27A0A0K0K1C4 114 aa10.59□□□□□ -0.71
GCDH-209ENST00000589039 COLCA2A8K830 154 aa10.59□□□□□ -0.71
GCDH-209ENST00000589039 LY6G6CO95867 125 aa10.59□□□□□ -0.71
GCDH-209ENST00000589039 RPL32P62910 135 aaKnown RBP10.59□□□□□ -0.71
GCDH-209ENST00000589039 TRBV6-8A0A0A6YYG3 113 aa10.58□□□□□ -0.72
GCDH-209ENST00000589039 LCE6AA0A183 80 aa10.58□□□□□ -0.72
GCDH-209ENST00000589039 I3L3M4 83 aa10.58□□□□□ -0.72
GCDH-209ENST00000589039 VCYO14598 125 aa10.58□□□□□ -0.72
GCDH-209ENST00000589039 PMCHP20382 165 aa10.58□□□□□ -0.72
GCDH-209ENST00000589039 COTL1Q14019 142 aa10.58□□□□□ -0.72
GCDH-209ENST00000589039 NTM-AS1Q6ZSK4 140 aa10.58□□□□□ -0.72
GCDH-209ENST00000589039 TRAV8-6A0A0B4J262 113 aa10.57□□□□□ -0.72
GCDH-209ENST00000589039 PRSS47A8MTI9 375 aa10.57□□□□□ -0.72
GCDH-209ENST00000589039 ALKBH7Q9BT30 221 aaPredicted RBP10.57□□□□□ -0.72
GCDH-209ENST00000589039 SMIM2Q9BVW6 85 aa10.57□□□□□ -0.72
GCDH-209ENST00000589039 RYR2Q92736 4967 aa10.56□□□□□ -0.72
GCDH-209ENST00000589039 IGHV1-24A0A0C4DH33 117 aa10.56□□□□□ -0.72
GCDH-209ENST00000589039 IQCJQ1A5X6 159 aa10.56□□□□□ -0.72
GCDH-209ENST00000589039 WFDC10BQ8IUB3 73 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms