RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 SPXQ9BT56 116 aa5.33□□□□□ -1.56
SPIDR-228ENST00000588781 NHP2Q9NX24 153 aaKnown RBP5.33□□□□□ -1.56
SPIDR-228ENST00000588781 A0A087WWL8 130 aa5.32□□□□□ -1.56
SPIDR-228ENST00000588781 IGIPA6NJ69 53 aa5.32□□□□□ -1.56
SPIDR-228ENST00000588781 M0QY20 66 aa5.32□□□□□ -1.56
SPIDR-228ENST00000588781 FXYD2P54710 66 aa5.32□□□□□ -1.56
SPIDR-228ENST00000588781 DEFB1P60022 68 aa5.32□□□□□ -1.56
SPIDR-228ENST00000588781 SMAGPQ0VAQ4 97 aa5.32□□□□□ -1.56
SPIDR-228ENST00000588781 SRSF9Q13242 221 aaKnown RBP eCLIP5.32□□□□□ -1.56
SPIDR-228ENST00000588781 SPINK13Q1W4C9 94 aa5.32□□□□□ -1.56
SPIDR-228ENST00000588781 C12orf74Q32Q52 190 aa5.32□□□□□ -1.56
SPIDR-228ENST00000588781 ZNF876PQ49A33 203 aa5.32□□□□□ -1.56
SPIDR-228ENST00000588781 FAM74A4Q5TZK3 123 aa5.32□□□□□ -1.56
SPIDR-228ENST00000588781 Q8N1Y9 231 aa5.32□□□□□ -1.56
SPIDR-228ENST00000588781 PLEKHB2Q96CS7 222 aa5.32□□□□□ -1.56
SPIDR-228ENST00000588781 DNAJC30Q96LL9 226 aa5.32□□□□□ -1.56
SPIDR-228ENST00000588781 VPS25Q9BRG1 176 aa5.32□□□□□ -1.56
SPIDR-228ENST00000588781 SPANXB1Q9NS25 103 aaPredicted RBP5.32□□□□□ -1.56
SPIDR-228ENST00000588781 MDFICQ9P1T7 246 aa5.32□□□□□ -1.56
SPIDR-228ENST00000588781 NBEAL1Q6ZS30 2694 aa5.32□□□□□ -1.56
SPIDR-228ENST00000588781 HRNRQ86YZ3 2850 aaPredicted RBP5.32□□□□□ -1.56
SPIDR-228ENST00000588781 FBN1P35555 2871 aaKnown RBP5.31□□□□□ -1.56
SPIDR-228ENST00000588781 TRBV7-3A0A075B6L6 115 aa5.31□□□□□ -1.56
SPIDR-228ENST00000588781 A0A1B0GWB2 263 aa5.31□□□□□ -1.56
SPIDR-228ENST00000588781 IGLL5B9A064 214 aa5.31□□□□□ -1.56
SPIDR-228ENST00000588781 F8W1H4 67 aa5.31□□□□□ -1.56
SPIDR-228ENST00000588781 M0R2P5 195 aa5.31□□□□□ -1.56
SPIDR-228ENST00000588781 INSP01308 110 aa5.31□□□□□ -1.56
SPIDR-228ENST00000588781 IGKV3-20P01619 116 aa5.31□□□□□ -1.56
SPIDR-228ENST00000588781 CRYGDP07320 174 aa5.31□□□□□ -1.56
SPIDR-228ENST00000588781 LGALS3P17931 250 aaKnown RBP5.31□□□□□ -1.56
SPIDR-228ENST00000588781 RBX1P62877 108 aa5.31□□□□□ -1.56
SPIDR-228ENST00000588781 AMTNQ6UX39 209 aa5.31□□□□□ -1.56
SPIDR-228ENST00000588781 NFE4Q86UQ8 179 aa5.31□□□□□ -1.56
SPIDR-228ENST00000588781 MAPKAPK5-AS1Q8N8E1 139 aa5.31□□□□□ -1.56
SPIDR-228ENST00000588781 RNASE8Q8TDE3 154 aaKnown RBP5.31□□□□□ -1.56
SPIDR-228ENST00000588781 ZNF479Q96JC4 524 aa5.31□□□□□ -1.56
SPIDR-228ENST00000588781 DUX3Q96PT4 197 aa5.31□□□□□ -1.56
SPIDR-228ENST00000588781 SPAG8Q99932 426 aaPredicted RBP5.31□□□□□ -1.56
SPIDR-228ENST00000588781 PYGO1Q9Y3Y4 419 aa5.31□□□□□ -1.56
SPIDR-228ENST00000588781 TNFRSF18Q9Y5U5 241 aa5.31□□□□□ -1.56
SPIDR-228ENST00000588781 NSD1Q96L73 2696 aaPredicted RBP5.3□□□□□ -1.56
SPIDR-228ENST00000588781 TRAV12-2A0A075B6T6 113 aa5.3□□□□□ -1.56
SPIDR-228ENST00000588781 H3BMM0 161 aa5.3□□□□□ -1.56
SPIDR-228ENST00000588781 LEPROTO15243 131 aa5.3□□□□□ -1.56
SPIDR-228ENST00000588781 DEFB131AP59861 70 aa5.3□□□□□ -1.56
SPIDR-228ENST00000588781 RNF151Q2KHN1 245 aa5.3□□□□□ -1.56
SPIDR-228ENST00000588781 RRN3P1Q2M238 152 aa5.3□□□□□ -1.56
SPIDR-228ENST00000588781 TMEM170BQ5T4T1 132 aa5.3□□□□□ -1.56
SPIDR-228ENST00000588781 C20orf203Q8NBC4 194 aa5.3□□□□□ -1.56
SPIDR-228ENST00000588781 PHLDA1Q8WV24 401 aaPredicted RBP5.3□□□□□ -1.56
SPIDR-228ENST00000588781 VCX2Q9H322 139 aa5.3□□□□□ -1.56
SPIDR-228ENST00000588781 IGLV4-69A0A075B6H9 119 aa5.29□□□□□ -1.56
SPIDR-228ENST00000588781 SPRY2O43597 315 aa5.29□□□□□ -1.56
SPIDR-228ENST00000588781 CD300EQ496F6 205 aaPredicted RBP5.29□□□□□ -1.56
SPIDR-228ENST00000588781 KHDC1LQ5JSQ8 128 aa5.29□□□□□ -1.56
SPIDR-228ENST00000588781 C10orf99Q6UWK7 81 aa5.29□□□□□ -1.56
SPIDR-228ENST00000588781 NEGR1Q7Z3B1 354 aa5.29□□□□□ -1.56
SPIDR-228ENST00000588781 NRGNQ92686 78 aa5.29□□□□□ -1.56
SPIDR-228ENST00000588781 Q96MF0 132 aa5.29□□□□□ -1.56
SPIDR-228ENST00000588781 JPT2Q9H910 190 aa5.29□□□□□ -1.56
SPIDR-228ENST00000588781 SPANXA1Q9NS26 97 aa5.29□□□□□ -1.56
SPIDR-228ENST00000588781 COL6A5A8TX70 2615 aa5.28□□□□□ -1.56
SPIDR-228ENST00000588781 ACANP16112 2415 aa5.28□□□□□ -1.56
SPIDR-228ENST00000588781 KNCNA6PVL3 124 aa5.28□□□□□ -1.56
SPIDR-228ENST00000588781 TMEM238C9JI98 176 aa5.28□□□□□ -1.56
SPIDR-228ENST00000588781 J3QQQ9 107 aa5.28□□□□□ -1.56
SPIDR-228ENST00000588781 TSHBP01222 138 aa5.28□□□□□ -1.56
SPIDR-228ENST00000588781 EDN2P20800 178 aa5.28□□□□□ -1.56
SPIDR-228ENST00000588781 SLURP1P55000 103 aa5.28□□□□□ -1.56
SPIDR-228ENST00000588781 KLHL30-AS1Q8NEE0 82 aa5.28□□□□□ -1.56
SPIDR-228ENST00000588781 LINC01587Q99440 93 aa5.28□□□□□ -1.56
SPIDR-228ENST00000588781 TTTY13Q9BZ97 58 aa5.28□□□□□ -1.56
SPIDR-228ENST00000588781 STAB1Q9NY15 2570 aa5.28□□□□□ -1.56
SPIDR-228ENST00000588781 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.28□□□□□ -1.56
SPIDR-228ENST00000588781 TRBV20-1A0A075B6N2 111 aa5.27□□□□□ -1.57
SPIDR-228ENST00000588781 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.27□□□□□ -1.57
SPIDR-228ENST00000588781 G3V4G9 280 aa5.27□□□□□ -1.57
SPIDR-228ENST00000588781 CIDEAO60543 219 aa5.27□□□□□ -1.57
SPIDR-228ENST00000588781 CD28P10747 220 aa5.27□□□□□ -1.57
SPIDR-228ENST00000588781 PCP4P48539 62 aa5.27□□□□□ -1.57
SPIDR-228ENST00000588781 KRTAP10-9P60411 292 aa5.27□□□□□ -1.57
SPIDR-228ENST00000588781 RPL39P62891 51 aaKnown RBP5.27□□□□□ -1.57
SPIDR-228ENST00000588781 RPL24P83731 157 aaKnown RBP5.27□□□□□ -1.57
SPIDR-228ENST00000588781 DEFB114Q30KQ6 69 aa5.27□□□□□ -1.57
SPIDR-228ENST00000588781 GAGE13Q4V321 117 aa5.27□□□□□ -1.57
SPIDR-228ENST00000588781 STHQ8IWL8 128 aa5.27□□□□□ -1.57
SPIDR-228ENST00000588781 SLC25A29Q8N8R3 303 aa5.27□□□□□ -1.57
SPIDR-228ENST00000588781 MAPK1IP1LQ8NDC0 245 aa5.27□□□□□ -1.57
SPIDR-228ENST00000588781 DLX4Q92988 240 aaPredicted RBP5.27□□□□□ -1.57
SPIDR-228ENST00000588781 MAP6D1Q9H9H5 199 aa5.27□□□□□ -1.57
SPIDR-228ENST00000588781 MRPL16Q9NX20 251 aaKnown RBP5.27□□□□□ -1.57
SPIDR-228ENST00000588781 MXRA5Q9NR99 2828 aa5.27□□□□□ -1.57
SPIDR-228ENST00000588781 VPS13CQ709C8 3753 aa5.26□□□□□ -1.57
SPIDR-228ENST00000588781 FLNAP21333 2647 aaKnown RBP5.26□□□□□ -1.57
SPIDR-228ENST00000588781 ATRQ13535 2644 aa5.26□□□□□ -1.57
SPIDR-228ENST00000588781 IGLV4-3A0A075B6K6 122 aa5.26□□□□□ -1.57
SPIDR-228ENST00000588781 A0A0J9YY99 117 aa5.26□□□□□ -1.57
SPIDR-228ENST00000588781 TMEM223A0PJW6 202 aa5.26□□□□□ -1.57
SPIDR-228ENST00000588781 K7ERJ3 54 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms