RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 IGLV4-3A0A075B6K6 122 aa12.22□□□□□ -0.45
RANBP3-209ENST00000587411 A0A0J9YXV3 536 aa12.22□□□□□ -0.45
RANBP3-209ENST00000587411 H3BMM0 161 aa12.22□□□□□ -0.45
RANBP3-209ENST00000587411 IGHV4-39P01824 125 aa12.22□□□□□ -0.45
RANBP3-209ENST00000587411 IFITM1P13164 125 aa12.22□□□□□ -0.45
RANBP3-209ENST00000587411 UBE2WQ96B02 151 aa12.22□□□□□ -0.45
RANBP3-209ENST00000587411 IGHV3-64A0A075B6Q5 118 aa12.21□□□□□ -0.45
RANBP3-209ENST00000587411 ELANEP08246 267 aa12.21□□□□□ -0.45
RANBP3-209ENST00000587411 TRIAP1O43715 76 aa12.21□□□□□ -0.46
RANBP3-209ENST00000587411 K7EMT4 169 aa12.2□□□□□ -0.46
RANBP3-209ENST00000587411 IGHG2P01859 326 aa12.2□□□□□ -0.46
RANBP3-209ENST00000587411 BPESC1Q9GZL8 116 aa12.2□□□□□ -0.46
RANBP3-209ENST00000587411 GAGE12JA6NER3 117 aa12.2□□□□□ -0.46
RANBP3-209ENST00000587411 B5MCH6 92 aa12.2□□□□□ -0.46
RANBP3-209ENST00000587411 CRLF1O75462 422 aa12.2□□□□□ -0.46
RANBP3-209ENST00000587411 GAGE7O76087 117 aa12.2□□□□□ -0.46
RANBP3-209ENST00000587411 GAGE12FP0CL80 117 aa12.2□□□□□ -0.46
RANBP3-209ENST00000587411 GAGE12GP0CL81 117 aa12.2□□□□□ -0.46
RANBP3-209ENST00000587411 GAGE12IP0CL82 117 aa12.2□□□□□ -0.46
RANBP3-209ENST00000587411 PF4V1P10720 104 aa12.2□□□□□ -0.46
RANBP3-209ENST00000587411 GAGE4Q13068 117 aa12.2□□□□□ -0.46
RANBP3-209ENST00000587411 DCANP1Q8TF63 244 aa12.2□□□□□ -0.46
RANBP3-209ENST00000587411 TIMM21Q9BVV7 248 aa12.2□□□□□ -0.46
RANBP3-209ENST00000587411 DCHS2Q6V1P9 2916 aa12.19□□□□□ -0.46
RANBP3-209ENST00000587411 TEX49A0A1B0GTD5 131 aa12.19□□□□□ -0.46
RANBP3-209ENST00000587411 IGHV3-30-3P0DP02 117 aa12.19□□□□□ -0.46
RANBP3-209ENST00000587411 MRPL23Q16540 153 aaKnown RBP12.19□□□□□ -0.46
RANBP3-209ENST00000587411 ATMQ13315 3056 aa12.19□□□□□ -0.46
RANBP3-209ENST00000587411 H3BT86 120 aa12.19□□□□□ -0.46
RANBP3-209ENST00000587411 LITAFQ99732 161 aa12.19□□□□□ -0.46
RANBP3-209ENST00000587411 SPANXDQ9BXN6 97 aa12.19□□□□□ -0.46
RANBP3-209ENST00000587411 SPANXA1Q9NS26 97 aa12.19□□□□□ -0.46
RANBP3-209ENST00000587411 SPANXCQ9NY87 97 aa12.19□□□□□ -0.46
RANBP3-209ENST00000587411 PYGO1Q9Y3Y4 419 aa12.19□□□□□ -0.46
RANBP3-209ENST00000587411 COX6CP09669 75 aa12.18□□□□□ -0.46
RANBP3-209ENST00000587411 BEX4Q9NWD9 120 aaPredicted RBP12.18□□□□□ -0.46
RANBP3-209ENST00000587411 C2orf82Q6UX34 121 aa12.18□□□□□ -0.46
RANBP3-209ENST00000587411 ICOSQ9Y6W8 199 aa12.18□□□□□ -0.46
RANBP3-209ENST00000587411 A0A1W2PPR1 153 aa12.17□□□□□ -0.46
RANBP3-209ENST00000587411 C15orf53Q8NAA6 179 aa12.17□□□□□ -0.46
RANBP3-209ENST00000587411 MRPS36P82909 103 aaKnown RBP12.17□□□□□ -0.46
RANBP3-209ENST00000587411 LRBAP50851 2863 aa12.17□□□□□ -0.46
RANBP3-209ENST00000587411 IGHV1OR15-1A0A075B7D0 117 aa12.16□□□□□ -0.46
RANBP3-209ENST00000587411 IGHV3OR16-10A0A075B7F0 116 aa12.16□□□□□ -0.46
RANBP3-209ENST00000587411 SPXQ9BT56 116 aa12.16□□□□□ -0.46
RANBP3-209ENST00000587411 UBTD1Q9HAC8 227 aa12.16□□□□□ -0.46
RANBP3-209ENST00000587411 ZNF580Q9UK33 172 aa12.16□□□□□ -0.46
RANBP3-209ENST00000587411 CD28P10747 220 aa12.15□□□□□ -0.46
RANBP3-209ENST00000587411 CACNA1BQ00975 2339 aa12.15□□□□□ -0.46
RANBP3-209ENST00000587411 IGHV1-58A0A0C4DH39 117 aa12.15□□□□□ -0.46
RANBP3-209ENST00000587411 FAM240AA0A1B0GVK7 77 aa12.15□□□□□ -0.46
RANBP3-209ENST00000587411 IGLV1-40P01703 118 aa12.15□□□□□ -0.46
RANBP3-209ENST00000587411 PRSS2P07478 247 aa12.15□□□□□ -0.46
RANBP3-209ENST00000587411 H7C423 109 aa12.14□□□□□ -0.47
RANBP3-209ENST00000587411 MIAQ16674 131 aa12.14□□□□□ -0.47
RANBP3-209ENST00000587411 EDA2RQ9HAV5 297 aa12.14□□□□□ -0.47
RANBP3-209ENST00000587411 NDUFA12Q9UI09 145 aa12.14□□□□□ -0.47
RANBP3-209ENST00000587411 BRD3OSQ6XYD6 125 aa12.14□□□□□ -0.47
RANBP3-209ENST00000587411 YAE1D1Q9NRH1 226 aa12.14□□□□□ -0.47
RANBP3-209ENST00000587411 SNRPD3P62318 126 aaKnown RBP12.13□□□□□ -0.47
RANBP3-209ENST00000587411 TRAV12-2A0A075B6T6 113 aa12.13□□□□□ -0.47
RANBP3-209ENST00000587411 A6NDX4 124 aa12.13□□□□□ -0.47
RANBP3-209ENST00000587411 ADARB2-AS1A8MUL3 147 aa12.13□□□□□ -0.47
RANBP3-209ENST00000587411 NBL1P41271 181 aa12.13□□□□□ -0.47
RANBP3-209ENST00000587411 LY6EQ16553 131 aa12.13□□□□□ -0.47
RANBP3-209ENST00000587411 TRGV11A0A075B6L2 103 aa12.12□□□□□ -0.47
RANBP3-209ENST00000587411 CCDC179H3BU77 68 aa12.12□□□□□ -0.47
RANBP3-209ENST00000587411 DEFB121Q5J5C9 76 aa12.12□□□□□ -0.47
RANBP3-209ENST00000587411 LST1O00453 97 aa12.11□□□□□ -0.47
RANBP3-209ENST00000587411 EDN2P20800 178 aa12.11□□□□□ -0.47
RANBP3-209ENST00000587411 KLRB1Q12918 225 aa12.11□□□□□ -0.47
RANBP3-209ENST00000587411 ADAMTSL4-AS1Q5T5F5 129 aa12.11□□□□□ -0.47
RANBP3-209ENST00000587411 VSIG2Q96IQ7 327 aa12.11□□□□□ -0.47
RANBP3-209ENST00000587411 TRAV8-3A0A0A6YYJ7 113 aa12.11□□□□□ -0.47
RANBP3-209ENST00000587411 TINCRA0A1B0GVN0 87 aa12.11□□□□□ -0.47
RANBP3-209ENST00000587411 TIMM17BO60830 172 aa12.11□□□□□ -0.47
RANBP3-209ENST00000587411 TMEM61Q8N0U2 210 aa12.1□□□□□ -0.47
RANBP3-209ENST00000587411 FAM104AQ969W3 186 aa12.1□□□□□ -0.47
RANBP3-209ENST00000587411 H3BUX3 64 aa12.1□□□□□ -0.47
RANBP3-209ENST00000587411 IGKV3-20P01619 116 aa12.1□□□□□ -0.47
RANBP3-209ENST00000587411 CFHR3Q02985 330 aa12.1□□□□□ -0.47
RANBP3-209ENST00000587411 HRNRQ86YZ3 2850 aaPredicted RBP12.09□□□□□ -0.47
RANBP3-209ENST00000587411 FOXC1Q12948 553 aa12.09□□□□□ -0.47
RANBP3-209ENST00000587411 RNF152Q8N8N0 203 aa12.09□□□□□ -0.47
RANBP3-209ENST00000587411 CEP295Q9C0D2 2601 aa12.09□□□□□ -0.47
RANBP3-209ENST00000587411 BLCAPP62952 87 aa12.09□□□□□ -0.47
RANBP3-209ENST00000587411 SPINK13Q1W4C9 94 aa12.09□□□□□ -0.47
RANBP3-209ENST00000587411 TLN1Q9Y490 2541 aaKnown RBP12.08□□□□□ -0.47
RANBP3-209ENST00000587411 K7EQG2 157 aa12.08□□□□□ -0.48
RANBP3-209ENST00000587411 MED13LQ71F56 2210 aa12.08□□□□□ -0.48
RANBP3-209ENST00000587411 CLEC2BQ92478 149 aa12.07□□□□□ -0.48
RANBP3-209ENST00000587411 TNFRSF18Q9Y5U5 241 aa12.06□□□□□ -0.48
RANBP3-209ENST00000587411 TRBV7-7A0A0K0K1E9 115 aa12.06□□□□□ -0.48
RANBP3-209ENST00000587411 IGHV4-38-2P0DP08 117 aa12.05□□□□□ -0.48
RANBP3-209ENST00000587411 CEMP1Q6PRD7 247 aaPredicted RBP12.04□□□□□ -0.48
RANBP3-209ENST00000587411 UBE2D4Q9Y2X8 147 aa12.04□□□□□ -0.48
RANBP3-209ENST00000587411 ACYP1P07311 99 aa12.04□□□□□ -0.48
RANBP3-209ENST00000587411 DUX3Q96PT4 197 aa12.04□□□□□ -0.48
RANBP3-209ENST00000587411 FAM110AQ9BQ89 295 aa12.04□□□□□ -0.48
RANBP3-209ENST00000587411 NPC2P61916 151 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms