RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PKHD1L1Q86WI1 4243 aa9.28□□□□□ -0.92
SDF2-202ENST00000585428 PTTG1O95997 202 aa9.27□□□□□ -0.93
SDF2-202ENST00000585428 TCEAL7Q9BRU2 100 aa9.27□□□□□ -0.93
SDF2-202ENST00000585428 CHCHD5Q9BSY4 110 aa9.27□□□□□ -0.93
SDF2-202ENST00000585428 VAX2Q9UIW0 290 aa9.27□□□□□ -0.93
SDF2-202ENST00000585428 PKIAP61925 76 aa9.26□□□□□ -0.93
SDF2-202ENST00000585428 AKR1C8PQ5T2L2 129 aa9.26□□□□□ -0.93
SDF2-202ENST00000585428 Q6ZRU5 148 aa9.26□□□□□ -0.93
SDF2-202ENST00000585428 OR10AG1Q8NH19 301 aa9.26□□□□□ -0.93
SDF2-202ENST00000585428 SNAI2O43623 268 aa9.25□□□□□ -0.93
SDF2-202ENST00000585428 HLA-DQA1P01909 254 aa9.25□□□□□ -0.93
SDF2-202ENST00000585428 CXCL1P09341 107 aa9.25□□□□□ -0.93
SDF2-202ENST00000585428 GIPP09681 153 aaPredicted RBP9.25□□□□□ -0.93
SDF2-202ENST00000585428 RBX1P62877 108 aa9.25□□□□□ -0.93
SDF2-202ENST00000585428 RPL19P84098 196 aaKnown RBP9.25□□□□□ -0.93
SDF2-202ENST00000585428 CIRBPQ14011 172 aaKnown RBP9.25□□□□□ -0.93
SDF2-202ENST00000585428 TMEM97Q5BJF2 176 aa9.25□□□□□ -0.93
SDF2-202ENST00000585428 LINC00269Q8N2A0 174 aa9.25□□□□□ -0.93
SDF2-202ENST00000585428 CLRN3Q8NCR9 226 aa9.25□□□□□ -0.93
SDF2-202ENST00000585428 MLST8Q9BVC4 326 aa9.25□□□□□ -0.93
SDF2-202ENST00000585428 ZNF471Q9BX82 626 aaPredicted RBP9.25□□□□□ -0.93
SDF2-202ENST00000585428 KIF25-AS1Q9Y6Z4 181 aa9.25□□□□□ -0.93
SDF2-202ENST00000585428 MAP1LC3B2A6NCE7 125 aa9.24□□□□□ -0.93
SDF2-202ENST00000585428 OR5AL1P0C617 328 aa9.24□□□□□ -0.93
SDF2-202ENST00000585428 ZNF56Q15929 161 aa9.24□□□□□ -0.93
SDF2-202ENST00000585428 CST9LP1Q5W188 147 aa9.24□□□□□ -0.93
SDF2-202ENST00000585428 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.24□□□□□ -0.93
SDF2-202ENST00000585428 MAP1LC3BQ9GZQ8 125 aa9.24□□□□□ -0.93
SDF2-202ENST00000585428 A0A0D9SG52 128 aa9.23□□□□□ -0.93
SDF2-202ENST00000585428 S100A9P06702 114 aaKnown RBP9.23□□□□□ -0.93
SDF2-202ENST00000585428 CNBPP62633 177 aaKnown RBP9.23□□□□□ -0.93
SDF2-202ENST00000585428 DERL1Q9BUN8 251 aa9.23□□□□□ -0.93
SDF2-202ENST00000585428 CYTL1Q9NRR1 136 aa9.23□□□□□ -0.93
SDF2-202ENST00000585428 FXYD6-FXYD2A0A087WZ82 144 aa9.22□□□□□ -0.93
SDF2-202ENST00000585428 MUC21A0A0G2JKD1 596 aa9.22□□□□□ -0.93
SDF2-202ENST00000585428 MUC21A0A140T8X8 626 aa9.22□□□□□ -0.93
SDF2-202ENST00000585428 F5H697 171 aa9.22□□□□□ -0.93
SDF2-202ENST00000585428 PAGE4O60829 102 aa9.22□□□□□ -0.93
SDF2-202ENST00000585428 IQCJQ1A5X6 159 aa9.22□□□□□ -0.93
SDF2-202ENST00000585428 SLPIP03973 132 aa9.21□□□□□ -0.94
SDF2-202ENST00000585428 AKR1C3P42330 323 aa9.21□□□□□ -0.94
SDF2-202ENST00000585428 GAGE6Q13070 117 aa9.21□□□□□ -0.94
SDF2-202ENST00000585428 SPANXN1Q5VSR9 72 aa9.21□□□□□ -0.94
SDF2-202ENST00000585428 STOML3Q8TAV4 291 aa9.21□□□□□ -0.94
SDF2-202ENST00000585428 TRBV25-1A0A075B6N4 114 aa9.2□□□□□ -0.94
SDF2-202ENST00000585428 G3V3Q6 166 aa9.2□□□□□ -0.94
SDF2-202ENST00000585428 REG3AQ06141 175 aa9.2□□□□□ -0.94
SDF2-202ENST00000585428 CLPSL2Q6UWE3 100 aa9.2□□□□□ -0.94
SDF2-202ENST00000585428 BAGE2Q86Y30 109 aa9.2□□□□□ -0.94
SDF2-202ENST00000585428 TRAV8-4A0A0B4J246 113 aa9.19□□□□□ -0.94
SDF2-202ENST00000585428 A0A1B0GUV1 79 aa9.19□□□□□ -0.94
SDF2-202ENST00000585428 M0QY20 66 aa9.19□□□□□ -0.94
SDF2-202ENST00000585428 P01737 135 aa9.19□□□□□ -0.94
SDF2-202ENST00000585428 SSTP61278 116 aa9.19□□□□□ -0.94
SDF2-202ENST00000585428 C20orf203Q8NBC4 194 aa9.19□□□□□ -0.94
SDF2-202ENST00000585428 MBD3L1Q8WWY6 194 aa9.19□□□□□ -0.94
SDF2-202ENST00000585428 IGHV1-24A0A0C4DH33 117 aa9.18□□□□□ -0.94
SDF2-202ENST00000585428 TMUB2Q71RG4 321 aa9.18□□□□□ -0.94
SDF2-202ENST00000585428 RNF185Q96GF1 192 aa9.18□□□□□ -0.94
SDF2-202ENST00000585428 IGLV10-54A0A075B6I4 117 aa9.17□□□□□ -0.94
SDF2-202ENST00000585428 IGHV3-64A0A075B6Q5 118 aa9.17□□□□□ -0.94
SDF2-202ENST00000585428 A0A087WYN8 130 aa9.17□□□□□ -0.94
SDF2-202ENST00000585428 SCO2A0A1W2PP80 73 aa9.17□□□□□ -0.94
SDF2-202ENST00000585428 hDV102S1A0JD36 115 aa9.17□□□□□ -0.94
SDF2-202ENST00000585428 SMIM17P0DL12 118 aa9.17□□□□□ -0.94
SDF2-202ENST00000585428 SFT2D1Q8WV19 159 aa9.17□□□□□ -0.94
SDF2-202ENST00000585428 DPH3Q96FX2 82 aa9.17□□□□□ -0.94
SDF2-202ENST00000585428 IGLV4-60A0A075B6I1 120 aa9.16□□□□□ -0.94
SDF2-202ENST00000585428 GZMBP10144 247 aa9.16□□□□□ -0.94
SDF2-202ENST00000585428 GFRA4Q9GZZ7 299 aa9.16□□□□□ -0.94
SDF2-202ENST00000585428 ARPC5O15511 151 aa9.15□□□□□ -0.94
SDF2-202ENST00000585428 SPACA4Q8TDM5 124 aa9.15□□□□□ -0.94
SDF2-202ENST00000585428 AP1S3Q96PC3 154 aa9.15□□□□□ -0.94
SDF2-202ENST00000585428 PLAC8Q9NZF1 115 aa9.15□□□□□ -0.94
SDF2-202ENST00000585428 RNF213Q63HN8 5207 aa9.14□□□□□ -0.95
SDF2-202ENST00000585428 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.14□□□□□ -0.95
SDF2-202ENST00000585428 IGLC6P0CF74 106 aa9.14□□□□□ -0.95
SDF2-202ENST00000585428 CHTF8P0CG12 524 aa9.14□□□□□ -0.95
SDF2-202ENST00000585428 RAB5CP51148 216 aa9.14□□□□□ -0.95
SDF2-202ENST00000585428 AP5S1Q9NUS5 200 aa9.14□□□□□ -0.95
SDF2-202ENST00000585428 UMAD1C9J7I0 102 aa9.13□□□□□ -0.95
SDF2-202ENST00000585428 H7C1H1 209 aa9.13□□□□□ -0.95
SDF2-202ENST00000585428 SUMO4Q6EEV6 95 aa9.13□□□□□ -0.95
SDF2-202ENST00000585428 TMEM243Q9BU79 118 aa9.13□□□□□ -0.95
SDF2-202ENST00000585428 RPL35P42766 123 aaKnown RBP9.12□□□□□ -0.95
SDF2-202ENST00000585428 NKX2-5P52952 324 aaPredicted RBP9.12□□□□□ -0.95
SDF2-202ENST00000585428 FAM213BQ8TBF2 198 aa9.12□□□□□ -0.95
SDF2-202ENST00000585428 PGLYRP4Q96LB8 373 aa9.12□□□□□ -0.95
SDF2-202ENST00000585428 LINC01600Q96MT4 127 aa9.12□□□□□ -0.95
SDF2-202ENST00000585428 A0A1B0GV50 99 aa9.11□□□□□ -0.95
SDF2-202ENST00000585428 PHOX2AO14813 284 aa9.11□□□□□ -0.95
SDF2-202ENST00000585428 PFDN1O60925 122 aa9.11□□□□□ -0.95
SDF2-202ENST00000585428 RASL11AQ6T310 242 aa9.11□□□□□ -0.95
SDF2-202ENST00000585428 KCNRGQ8N5I3 272 aa9.11□□□□□ -0.95
SDF2-202ENST00000585428 FER1L6-AS1Q8NA97 138 aa9.11□□□□□ -0.95
SDF2-202ENST00000585428 NIT2Q9NQR4 276 aa9.11□□□□□ -0.95
SDF2-202ENST00000585428 C19orf71A6NCJ1 209 aa9.1□□□□□ -0.95
SDF2-202ENST00000585428 MGPP08493 103 aa9.1□□□□□ -0.95
SDF2-202ENST00000585428 H2AFB1P0C5Y9 115 aa9.1□□□□□ -0.95
SDF2-202ENST00000585428 CACNG7P62955 275 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms