RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 GAGE12JA6NER3 117 aa7.59□□□□□ -1.19
RFFL-212ENST00000584655 H7C2G1 150 aa7.59□□□□□ -1.19
RFFL-212ENST00000584655 SOCS3O14543 225 aa7.59□□□□□ -1.19
RFFL-212ENST00000584655 GAGE4Q13068 117 aa7.59□□□□□ -1.19
RFFL-212ENST00000584655 GAGE5Q13069 117 aa7.59□□□□□ -1.19
RFFL-212ENST00000584655 ODF3L2Q3SX64 289 aa7.59□□□□□ -1.19
RFFL-212ENST00000584655 GAGE13Q4V321 117 aa7.59□□□□□ -1.19
RFFL-212ENST00000584655 ZNF625Q96I27 306 aaPredicted RBP7.59□□□□□ -1.19
RFFL-212ENST00000584655 SPAG8Q99932 426 aaPredicted RBP7.59□□□□□ -1.19
RFFL-212ENST00000584655 DEFB135Q30KP9 77 aa7.59□□□□□ -1.19
RFFL-212ENST00000584655 FAM110AQ9BQ89 295 aa7.59□□□□□ -1.19
RFFL-212ENST00000584655 CD5LO43866 347 aa7.59□□□□□ -1.19
RFFL-212ENST00000584655 LINC01559Q495D7 138 aa7.59□□□□□ -1.19
RFFL-212ENST00000584655 SUMO4Q6EEV6 95 aa7.59□□□□□ -1.19
RFFL-212ENST00000584655 Q6ZTI0 123 aa7.59□□□□□ -1.19
RFFL-212ENST00000584655 ST20Q9HBF5 79 aa7.59□□□□□ -1.19
RFFL-212ENST00000584655 H3BMM0 161 aa7.58□□□□□ -1.2
RFFL-212ENST00000584655 SUMO2P61956 95 aaKnown RBP7.58□□□□□ -1.2
RFFL-212ENST00000584655 ZNF575Q86XF7 245 aa7.58□□□□□ -1.2
RFFL-212ENST00000584655 CHCHD1Q96BP2 118 aaKnown RBP7.58□□□□□ -1.2
RFFL-212ENST00000584655 ZNF747Q9BV97 191 aa7.58□□□□□ -1.2
RFFL-212ENST00000584655 C11orf68Q9H3H3 251 aaKnown RBP7.58□□□□□ -1.2
RFFL-212ENST00000584655 TP53TG1Q9Y2A0 90 aa7.58□□□□□ -1.2
RFFL-212ENST00000584655 A6NDN8 102 aa7.58□□□□□ -1.2
RFFL-212ENST00000584655 TAX1BP3O14907 124 aa7.58□□□□□ -1.2
RFFL-212ENST00000584655 SMAGPQ0VAQ4 97 aa7.58□□□□□ -1.2
RFFL-212ENST00000584655 RRN3P1Q2M238 152 aa7.58□□□□□ -1.2
RFFL-212ENST00000584655 GTSF1LQ9H1H1 148 aa7.58□□□□□ -1.2
RFFL-212ENST00000584655 DPH3P1Q9H4G8 78 aa7.58□□□□□ -1.2
RFFL-212ENST00000584655 DGAT2L7PQ6IED9 249 aa7.58□□□□□ -1.2
RFFL-212ENST00000584655 TSSC4Q9Y5U2 329 aaPredicted RBP7.58□□□□□ -1.2
RFFL-212ENST00000584655 LOC100131303A0A0U1RQF7 123 aa7.57□□□□□ -1.2
RFFL-212ENST00000584655 RBX1P62877 108 aa7.57□□□□□ -1.2
RFFL-212ENST00000584655 ESDP10768 282 aa7.57□□□□□ -1.2
RFFL-212ENST00000584655 LRRC75A-AS1Q8N1F1 130 aa7.57□□□□□ -1.2
RFFL-212ENST00000584655 RASL10AQ92737 203 aa7.57□□□□□ -1.2
RFFL-212ENST00000584655 H3BUA1 57 aa7.57□□□□□ -1.2
RFFL-212ENST00000584655 KRTAP10-3P60369 221 aa7.57□□□□□ -1.2
RFFL-212ENST00000584655 AMTNQ6UX39 209 aa7.57□□□□□ -1.2
RFFL-212ENST00000584655 C2orf66Q6UXQ4 117 aa7.57□□□□□ -1.2
RFFL-212ENST00000584655 C4orf3Q8WVX3 66 aa7.57□□□□□ -1.2
RFFL-212ENST00000584655 A0A1B0GW15 77 aa7.56□□□□□ -1.2
RFFL-212ENST00000584655 Q6ZSN1 163 aa7.56□□□□□ -1.2
RFFL-212ENST00000584655 ZNRF2Q8NHG8 242 aa7.56□□□□□ -1.2
RFFL-212ENST00000584655 A0A096LNJ9 63 aa7.56□□□□□ -1.2
RFFL-212ENST00000584655 FABP2P12104 132 aa7.56□□□□□ -1.2
RFFL-212ENST00000584655 TNFRSF18Q9Y5U5 241 aa7.56□□□□□ -1.2
RFFL-212ENST00000584655 LOC107984156A0A0G2JMH3 177 aa7.56□□□□□ -1.2
RFFL-212ENST00000584655 NDUFA7O95182 113 aa7.56□□□□□ -1.2
RFFL-212ENST00000584655 LAGE3Q14657 143 aa7.56□□□□□ -1.2
RFFL-212ENST00000584655 ARL17AQ8IVW1 177 aa7.56□□□□□ -1.2
RFFL-212ENST00000584655 A8MZ25 164 aa7.55□□□□□ -1.2
RFFL-212ENST00000584655 SCGB1D4Q6XE38 83 aa7.55□□□□□ -1.2
RFFL-212ENST00000584655 TEX29Q8N6K0 151 aa7.55□□□□□ -1.2
RFFL-212ENST00000584655 ZNF479Q96JC4 524 aa7.55□□□□□ -1.2
RFFL-212ENST00000584655 KIR2DL4Q99706 377 aa7.55□□□□□ -1.2
RFFL-212ENST00000584655 IGKV2D-26A0A0A0MRZ7 120 aa7.55□□□□□ -1.2
RFFL-212ENST00000584655 TRAV13-1A0A0B4J241 112 aa7.55□□□□□ -1.2
RFFL-212ENST00000584655 PET117Q6UWS5 81 aa7.55□□□□□ -1.2
RFFL-212ENST00000584655 C3orf56Q8N813 242 aa7.55□□□□□ -1.2
RFFL-212ENST00000584655 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.55□□□□□ -1.2
RFFL-212ENST00000584655 HIST1H4GQ99525 98 aa7.55□□□□□ -1.2
RFFL-212ENST00000584655 TMEM262E9PQX1 116 aa7.54□□□□□ -1.2
RFFL-212ENST00000584655 CIDEAO60543 219 aa7.54□□□□□ -1.2
RFFL-212ENST00000584655 FSHBP01225 129 aa7.54□□□□□ -1.2
RFFL-212ENST00000584655 DEFB121Q5J5C9 76 aa7.54□□□□□ -1.2
RFFL-212ENST00000584655 SMIM2Q9BVW6 85 aa7.54□□□□□ -1.2
RFFL-212ENST00000584655 CRLF1O75462 422 aa7.54□□□□□ -1.2
RFFL-212ENST00000584655 SYT8Q8NBV8 401 aa7.54□□□□□ -1.2
RFFL-212ENST00000584655 K7EMT4 169 aa7.54□□□□□ -1.2
RFFL-212ENST00000584655 FOXI2Q6ZQN5 318 aa7.54□□□□□ -1.2
RFFL-212ENST00000584655 SPXQ9BT56 116 aa7.54□□□□□ -1.2
RFFL-212ENST00000584655 HILS1P60008 231 aa7.53□□□□□ -1.2
RFFL-212ENST00000584655 TRGV4A0A0C4DH28 118 aa7.53□□□□□ -1.2
RFFL-212ENST00000584655 RETNQ9HD89 108 aa7.53□□□□□ -1.2
RFFL-212ENST00000584655 ZNF580Q9UK33 172 aa7.53□□□□□ -1.2
RFFL-212ENST00000584655 RBAKDNA6NC62 111 aa7.53□□□□□ -1.2
RFFL-212ENST00000584655 INSP01308 110 aa7.53□□□□□ -1.2
RFFL-212ENST00000584655 PRSS2P07478 247 aa7.53□□□□□ -1.2
RFFL-212ENST00000584655 SRSF9Q13242 221 aaKnown RBP eCLIP7.53□□□□□ -1.2
RFFL-212ENST00000584655 CRXO43186 299 aaPredicted RBP7.52□□□□□ -1.21
RFFL-212ENST00000584655 APOMO95445 188 aa7.52□□□□□ -1.21
RFFL-212ENST00000584655 MRPL53Q96EL3 112 aaKnown RBP7.52□□□□□ -1.21
RFFL-212ENST00000584655 ATP6V0BQ99437 205 aa7.52□□□□□ -1.21
RFFL-212ENST00000584655 TOMM7Q9P0U1 55 aa7.52□□□□□ -1.21
RFFL-212ENST00000584655 CYSLTR1Q9Y271 337 aa7.52□□□□□ -1.21
RFFL-212ENST00000584655 ANK3Q12955 4377 aaKnown RBP7.52□□□□□ -1.21
RFFL-212ENST00000584655 SMIM13P0DJ93 91 aa7.51□□□□□ -1.21
RFFL-212ENST00000584655 CRIP2P52943 208 aaPredicted RBP7.51□□□□□ -1.21
RFFL-212ENST00000584655 SAMD5Q5TGI4 173 aa7.51□□□□□ -1.21
RFFL-212ENST00000584655 NRACQ8N912 160 aa7.51□□□□□ -1.21
RFFL-212ENST00000584655 NXT2Q9NPJ8 142 aaKnown RBP7.51□□□□□ -1.21
RFFL-212ENST00000584655 COX8AP10176 69 aa7.51□□□□□ -1.21
RFFL-212ENST00000584655 HLA-DRB4P13762 266 aa7.51□□□□□ -1.21
RFFL-212ENST00000584655 SCRT2Q9NQ03 307 aa7.51□□□□□ -1.21
RFFL-212ENST00000584655 HLA-DRB4X5D2U9 266 aa7.51□□□□□ -1.21
RFFL-212ENST00000584655 ETDBQ3ZM63 59 aa7.51□□□□□ -1.21
RFFL-212ENST00000584655 KLLNB2CW77 178 aa7.5□□□□□ -1.21
RFFL-212ENST00000584655 SCGB1C2P0DMR2 95 aa7.5□□□□□ -1.21
RFFL-212ENST00000584655 SH2D6Q7Z4S9 175 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms