RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 SRIP30626 198 aa10.63□□□□□ -0.71
SKA2-209ENST00000583976 HIGD1CA8MV81 97 aa10.62□□□□□ -0.71
SKA2-209ENST00000583976 F5H697 171 aa10.62□□□□□ -0.71
SKA2-209ENST00000583976 ADCYAP1P18509 176 aa10.62□□□□□ -0.71
SKA2-209ENST00000583976 EVI2AP22794 236 aa10.62□□□□□ -0.71
SKA2-209ENST00000583976 FOXA3P55318 350 aaPredicted RBP10.62□□□□□ -0.71
SKA2-209ENST00000583976 WDR73Q6P4I2 378 aa10.62□□□□□ -0.71
SKA2-209ENST00000583976 Q9UF83 564 aa10.62□□□□□ -0.71
SKA2-209ENST00000583976 GAGE12JA6NER3 117 aa10.61□□□□□ -0.71
SKA2-209ENST00000583976 MGPP08493 103 aa10.61□□□□□ -0.71
SKA2-209ENST00000583976 TRGC1P0CF51 173 aa10.61□□□□□ -0.71
SKA2-209ENST00000583976 XGP55808 180 aa10.61□□□□□ -0.71
SKA2-209ENST00000583976 KRTAP10-1P60331 282 aa10.61□□□□□ -0.71
SKA2-209ENST00000583976 PNRC1Q12796 327 aaPredicted RBP10.61□□□□□ -0.71
SKA2-209ENST00000583976 GAGE1Q13065 139 aa10.61□□□□□ -0.71
SKA2-209ENST00000583976 GAGE4Q13068 117 aa10.61□□□□□ -0.71
SKA2-209ENST00000583976 GAGE5Q13069 117 aa10.61□□□□□ -0.71
SKA2-209ENST00000583976 GAGE13Q4V321 117 aa10.61□□□□□ -0.71
SKA2-209ENST00000583976 NEGR1Q7Z3B1 354 aa10.61□□□□□ -0.71
SKA2-209ENST00000583976 WFDC10BQ8IUB3 73 aa10.61□□□□□ -0.71
SKA2-209ENST00000583976 BORCS7Q96B45 105 aa10.61□□□□□ -0.71
SKA2-209ENST00000583976 GFRA4Q9GZZ7 299 aa10.61□□□□□ -0.71
SKA2-209ENST00000583976 KIF25-AS1Q9Y6Z4 181 aa10.61□□□□□ -0.71
SKA2-209ENST00000583976 DNAH8Q96JB1 4490 aa10.6□□□□□ -0.71
SKA2-209ENST00000583976 RAB4BP61018 213 aa10.6□□□□□ -0.71
SKA2-209ENST00000583976 HAMPP81172 84 aa10.6□□□□□ -0.71
SKA2-209ENST00000583976 CNFNQ9BYD5 112 aa10.6□□□□□ -0.71
SKA2-209ENST00000583976 A0A087WTM6 91 aa10.59□□□□□ -0.71
SKA2-209ENST00000583976 FAM231BA6NCW3 169 aa10.59□□□□□ -0.71
SKA2-209ENST00000583976 Q5VSD8 79 aa10.59□□□□□ -0.71
SKA2-209ENST00000583976 LYPD5Q6UWN5 251 aa10.59□□□□□ -0.71
SKA2-209ENST00000583976 NUP35Q8NFH5 326 aa10.59□□□□□ -0.71
SKA2-209ENST00000583976 NAT8BQ9UHF3 227 aa10.59□□□□□ -0.71
SKA2-209ENST00000583976 A0A1B0GUT8 65 aa10.58□□□□□ -0.72
SKA2-209ENST00000583976 SEC11CQ9BY50 192 aa10.58□□□□□ -0.72
SKA2-209ENST00000583976 DPH3P1Q9H4G8 78 aa10.58□□□□□ -0.72
SKA2-209ENST00000583976 SMIM27A0A1W2PRY6 76 aa10.57□□□□□ -0.72
SKA2-209ENST00000583976 PPP1R2P9O14990 202 aa10.57□□□□□ -0.72
SKA2-209ENST00000583976 MT-ND4LP03901 98 aa10.57□□□□□ -0.72
SKA2-209ENST00000583976 INAFM2P0DMQ5 153 aa10.57□□□□□ -0.72
SKA2-209ENST00000583976 LCE2DQ5TA82 110 aaPredicted RBP10.57□□□□□ -0.72
SKA2-209ENST00000583976 CDPF1Q6NVV7 123 aa10.57□□□□□ -0.72
SKA2-209ENST00000583976 SMIM15Q7Z3B0 74 aa10.57□□□□□ -0.72
SKA2-209ENST00000583976 ATP6V0E2Q8NHE4 81 aa10.57□□□□□ -0.72
SKA2-209ENST00000583976 FLG2Q5D862 2391 aaPredicted RBP10.57□□□□□ -0.72
SKA2-209ENST00000583976 SH2D6Q7Z4S9 175 aa10.56□□□□□ -0.72
SKA2-209ENST00000583976 ANAPC16Q96DE5 110 aa10.56□□□□□ -0.72
SKA2-209ENST00000583976 PGPEP1Q9NXJ5 209 aa10.56□□□□□ -0.72
SKA2-209ENST00000583976 EREGO14944 169 aa10.55□□□□□ -0.72
SKA2-209ENST00000583976 RPL36AP83881 106 aaKnown RBP10.55□□□□□ -0.72
SKA2-209ENST00000583976 RIGQ13278 110 aa10.55□□□□□ -0.72
SKA2-209ENST00000583976 SUMO4Q6EEV6 95 aa10.55□□□□□ -0.72
SKA2-209ENST00000583976 RPL36ALQ969Q0 106 aaKnown RBP10.55□□□□□ -0.72
SKA2-209ENST00000583976 TRAV26-2A0A0B4J265 109 aa10.54□□□□□ -0.72
SKA2-209ENST00000583976 TRBV10-1A0A0K0K1A3 114 aa10.54□□□□□ -0.72
SKA2-209ENST00000583976 NEXN-AS1Q8NBZ9 246 aa10.54□□□□□ -0.72
SKA2-209ENST00000583976 TRBV7-3A0A075B6L6 115 aa10.53□□□□□ -0.72
SKA2-209ENST00000583976 M0QY20 66 aa10.53□□□□□ -0.72
SKA2-209ENST00000583976 SMR3BP02814 79 aaPredicted RBP10.53□□□□□ -0.72
SKA2-209ENST00000583976 LINC00694P0DN24 101 aa10.53□□□□□ -0.72
SKA2-209ENST00000583976 C10orf91Q5T1B1 145 aa10.53□□□□□ -0.72
SKA2-209ENST00000583976 MRPL54Q6P161 138 aaKnown RBP10.53□□□□□ -0.72
SKA2-209ENST00000583976 NFE4Q86UQ8 179 aa10.53□□□□□ -0.72
SKA2-209ENST00000583976 IGHV3-38A0A0C4DH36 116 aa10.52□□□□□ -0.73
SKA2-209ENST00000583976 H7C1H1 209 aa10.52□□□□□ -0.73
SKA2-209ENST00000583976 CAMPP49913 170 aa10.52□□□□□ -0.73
SKA2-209ENST00000583976 FRZBQ92765 325 aa10.52□□□□□ -0.73
SKA2-209ENST00000583976 GTSF1LQ9H1H1 148 aa10.52□□□□□ -0.73
SKA2-209ENST00000583976 SRRM2Q9UQ35 2752 aaKnown RBP10.51□□□□□ -0.73
SKA2-209ENST00000583976 UBE2D3P61077 147 aa10.51□□□□□ -0.73
SKA2-209ENST00000583976 UBE2D2P62837 147 aa10.51□□□□□ -0.73
SKA2-209ENST00000583976 RASL11AQ6T310 242 aa10.51□□□□□ -0.73
SKA2-209ENST00000583976 AMN1Q8IY45 258 aa10.51□□□□□ -0.73
SKA2-209ENST00000583976 SLC7A5P1Q8MH63 180 aa10.51□□□□□ -0.73
SKA2-209ENST00000583976 GATD1Q8NB37 220 aa10.51□□□□□ -0.73
SKA2-209ENST00000583976 TMEM191AQ9H0A3 160 aa10.51□□□□□ -0.73
SKA2-209ENST00000583976 CARHSP1Q9Y2V2 147 aaKnown RBP10.51□□□□□ -0.73
SKA2-209ENST00000583976 OR10J3Q5JRS4 329 aa10.5□□□□□ -0.73
SKA2-209ENST00000583976 APOC3P02656 99 aa10.49□□□□□ -0.73
SKA2-209ENST00000583976 TIRAPP58753 221 aa10.49□□□□□ -0.73
SKA2-209ENST00000583976 LELP1Q5T871 98 aa10.49□□□□□ -0.73
SKA2-209ENST00000583976 CLRN3Q8NCR9 226 aa10.49□□□□□ -0.73
SKA2-209ENST00000583976 RNF185Q96GF1 192 aa10.49□□□□□ -0.73
SKA2-209ENST00000583976 NIT2Q9NQR4 276 aa10.49□□□□□ -0.73
SKA2-209ENST00000583976 TRAV9-2A0A087WT02 112 aa10.48□□□□□ -0.73
SKA2-209ENST00000583976 TRAV8-6A0A0B4J262 113 aa10.48□□□□□ -0.73
SKA2-209ENST00000583976 C7orf77A4D0Y5 90 aa10.48□□□□□ -0.73
SKA2-209ENST00000583976 GAS8-AS1O95177 125 aa10.48□□□□□ -0.73
SKA2-209ENST00000583976 RAB4AP20338 218 aa10.48□□□□□ -0.73
SKA2-209ENST00000583976 GCSHP23434 173 aa10.48□□□□□ -0.73
SKA2-209ENST00000583976 HBBP68871 147 aa10.48□□□□□ -0.73
SKA2-209ENST00000583976 DEFB104AQ8WTQ1 72 aa10.48□□□□□ -0.73
SKA2-209ENST00000583976 RPL39LQ96EH5 51 aaKnown RBP10.48□□□□□ -0.73
SKA2-209ENST00000583976 DNAJC30Q96LL9 226 aa10.48□□□□□ -0.73
SKA2-209ENST00000583976 CTDSP1Q9GZU7 261 aa10.48□□□□□ -0.73
SKA2-209ENST00000583976 RPS10P5Q9NQ39 176 aa10.48□□□□□ -0.73
SKA2-209ENST00000583976 A0A1B0GW15 77 aa10.47□□□□□ -0.73
SKA2-209ENST00000583976 A0A1B0GXF2 115 aa10.47□□□□□ -0.73
SKA2-209ENST00000583976 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.47□□□□□ -0.73
SKA2-209ENST00000583976 IGLV5-52A0A0A0MRZ9 124 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms