RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 C19orf73Q9NVV2 129 aa4.01□□□□□ -1.77
CRLF3-204ENST00000583527 MRPL16Q9NX20 251 aaKnown RBP4.01□□□□□ -1.77
CRLF3-204ENST00000583527 GOLT1BQ9Y3E0 138 aa4.01□□□□□ -1.77
CRLF3-204ENST00000583527 COL6A5A8TX70 2615 aa4.01□□□□□ -1.77
CRLF3-204ENST00000583527 TRBV6-5A0A0K0K1A5 114 aa4□□□□□ -1.77
CRLF3-204ENST00000583527 F5H697 171 aa4□□□□□ -1.77
CRLF3-204ENST00000583527 K7EMI3 77 aa4□□□□□ -1.77
CRLF3-204ENST00000583527 RHODO00212 210 aa4□□□□□ -1.77
CRLF3-204ENST00000583527 CRYGDP07320 174 aa4□□□□□ -1.77
CRLF3-204ENST00000583527 HTN1P15515 57 aa4□□□□□ -1.77
CRLF3-204ENST00000583527 ODF1Q14990 250 aa4□□□□□ -1.77
CRLF3-204ENST00000583527 ANKRD39Q53RE8 183 aa4□□□□□ -1.77
CRLF3-204ENST00000583527 Q6ZN92 141 aa4□□□□□ -1.77
CRLF3-204ENST00000583527 C1orf158Q8N1D5 194 aa4□□□□□ -1.77
CRLF3-204ENST00000583527 SPATA3Q8NHX4 192 aa4□□□□□ -1.77
CRLF3-204ENST00000583527 RNASE8Q8TDE3 154 aaKnown RBP4□□□□□ -1.77
CRLF3-204ENST00000583527 LINC01587Q99440 93 aa4□□□□□ -1.77
CRLF3-204ENST00000583527 TMEM208Q9BTX3 173 aa4□□□□□ -1.77
CRLF3-204ENST00000583527 SNHG12Q9BXW3 62 aa4□□□□□ -1.77
CRLF3-204ENST00000583527 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
CRLF3-204ENST00000583527 EDA2RQ9HAV5 297 aa4□□□□□ -1.77
CRLF3-204ENST00000583527 IGHV3OR16-12A0A075B7B8 117 aa3.99□□□□□ -1.77
CRLF3-204ENST00000583527 TRBV27A0A0K0K1C4 114 aa3.99□□□□□ -1.77
CRLF3-204ENST00000583527 SDHAF1A6NFY7 115 aa3.99□□□□□ -1.77
CRLF3-204ENST00000583527 A8MWV9 139 aa3.99□□□□□ -1.77
CRLF3-204ENST00000583527 H7C1H1 209 aa3.99□□□□□ -1.77
CRLF3-204ENST00000583527 M0QY20 66 aa3.99□□□□□ -1.77
CRLF3-204ENST00000583527 PRM2P04554 102 aa3.99□□□□□ -1.77
CRLF3-204ENST00000583527 GIG44P09565 113 aaPredicted RBP3.99□□□□□ -1.77
CRLF3-204ENST00000583527 RPL35AP18077 110 aaKnown RBP3.99□□□□□ -1.77
CRLF3-204ENST00000583527 CMC4P56277 68 aaPredicted RBP3.99□□□□□ -1.77
CRLF3-204ENST00000583527 RIPPLY3P57055 190 aa3.99□□□□□ -1.77
CRLF3-204ENST00000583527 RHOHQ15669 191 aa3.99□□□□□ -1.77
CRLF3-204ENST00000583527 PIK3CD-AS1Q5SR53 167 aa3.99□□□□□ -1.77
CRLF3-204ENST00000583527 C2orf66Q6UXQ4 117 aa3.99□□□□□ -1.77
CRLF3-204ENST00000583527 TMEM263Q8WUH6 116 aaKnown RBP3.99□□□□□ -1.77
CRLF3-204ENST00000583527 PTH2Q96A98 100 aa3.99□□□□□ -1.77
CRLF3-204ENST00000583527 TOMM6Q96B49 74 aa3.99□□□□□ -1.77
CRLF3-204ENST00000583527 DKK2Q9UBU2 259 aa3.99□□□□□ -1.77
CRLF3-204ENST00000583527 TP53TG1Q9Y2A0 90 aa3.99□□□□□ -1.77
CRLF3-204ENST00000583527 NBEAL1Q6ZS30 2694 aa3.99□□□□□ -1.77
CRLF3-204ENST00000583527 IGHV3-73A0A0B4J1V6 119 aa3.98□□□□□ -1.77
CRLF3-204ENST00000583527 DPM2O94777 84 aa3.98□□□□□ -1.77
CRLF3-204ENST00000583527 TSHBP01222 138 aa3.98□□□□□ -1.77
CRLF3-204ENST00000583527 FGF6P10767 208 aa3.98□□□□□ -1.77
CRLF3-204ENST00000583527 POLR2KP53803 58 aaKnown RBP3.98□□□□□ -1.77
CRLF3-204ENST00000583527 TCTAP57738 103 aa3.98□□□□□ -1.77
CRLF3-204ENST00000583527 NUTF2P61970 127 aaKnown RBP3.98□□□□□ -1.77
CRLF3-204ENST00000583527 CFAP126Q5VTH2 177 aa3.98□□□□□ -1.77
CRLF3-204ENST00000583527 UFSP1Q6NVU6 142 aa3.98□□□□□ -1.77
CRLF3-204ENST00000583527 SLC25A34Q6PIV7 304 aa3.98□□□□□ -1.77
CRLF3-204ENST00000583527 ZFP2Q6ZN57 461 aa3.98□□□□□ -1.77
CRLF3-204ENST00000583527 LINC00528Q8N1L1 170 aa3.98□□□□□ -1.77
CRLF3-204ENST00000583527 CITED1Q99966 193 aa3.98□□□□□ -1.77
CRLF3-204ENST00000583527 C2orf88Q9BSF0 95 aa3.98□□□□□ -1.77
CRLF3-204ENST00000583527 SPXQ9BT56 116 aa3.98□□□□□ -1.77
CRLF3-204ENST00000583527 MRPL35Q9NZE8 188 aaKnown RBP3.98□□□□□ -1.77
CRLF3-204ENST00000583527 CYSLTR1Q9Y271 337 aa3.98□□□□□ -1.77
CRLF3-204ENST00000583527 NBEAL2Q6ZNJ1 2754 aa3.98□□□□□ -1.77
CRLF3-204ENST00000583527 PKD1L1Q8TDX9 2849 aa3.98□□□□□ -1.77
CRLF3-204ENST00000583527 MGAM2Q2M2H8 2515 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 TENM3Q9P273 2699 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 A0A087WX48 190 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 TRGV1A0A0A0MS02 117 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 TRAV12-1A0A0B4J245 112 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 F8VRH5 84 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.97□□□□□ -1.77
CRLF3-204ENST00000583527 M0R143 59 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 RS1O15537 224 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 IGKCP01834 107 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 PRSS1P07477 247 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 P0DMU3 169 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 FAM231AP0DMU4 169 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 FAM231CP0DMU5 169 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 COX8AP10176 69 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 AZU1P20160 251 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 PLNP26678 52 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 RPL39P62891 51 aaKnown RBP3.97□□□□□ -1.77
CRLF3-204ENST00000583527 BATFQ16520 125 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 C9orf66Q5T8R8 295 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 Q6ZTI0 123 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 C2orf91Q6ZV80 131 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 GTSCR1Q86UQ5 136 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 BAALCQ8WXS3 180 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 C16orf74Q96GX8 76 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 SCGB3A1Q96QR1 104 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 KIR2DL4Q99706 377 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 C1QTNF4Q9BXJ3 329 aa3.97□□□□□ -1.77
CRLF3-204ENST00000583527 TRAV4A0A0B4J268 109 aa3.96□□□□□ -1.78
CRLF3-204ENST00000583527 PLAC8L1A1L4L8 177 aa3.96□□□□□ -1.78
CRLF3-204ENST00000583527 VCYO14598 125 aa3.96□□□□□ -1.78
CRLF3-204ENST00000583527 IGHV3-53P01767 116 aa3.96□□□□□ -1.78
CRLF3-204ENST00000583527 NMUP48645 174 aa3.96□□□□□ -1.78
CRLF3-204ENST00000583527 INSL3P51460 131 aa3.96□□□□□ -1.78
CRLF3-204ENST00000583527 LBHQ53QV2 105 aaPredicted RBP3.96□□□□□ -1.78
CRLF3-204ENST00000583527 Q6ZSN1 163 aa3.96□□□□□ -1.78
CRLF3-204ENST00000583527 STPG4Q8N801 248 aa3.96□□□□□ -1.78
CRLF3-204ENST00000583527 NEXN-AS1Q8NBZ9 246 aa3.96□□□□□ -1.78
CRLF3-204ENST00000583527 DEFB104AQ8WTQ1 72 aa3.96□□□□□ -1.78
CRLF3-204ENST00000583527 TIMM17AQ99595 171 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms