RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	NTM-AS1	Q6ZSK4	140 aa		7.54	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	SNAI2	O43623	268 aa		7.53	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	GZMB	P10144	247 aa		7.53	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	DERL1	Q9BUN8	251 aa		7.53	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	MLST8	Q9BVC4	326 aa		7.53	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	TPPP3	Q9BW30	176 aa		7.53	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	S100A9	P06702	114 aa	Known RBP	7.52	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	PRSS1	P07477	247 aa		7.52	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	MGP	P08493	103 aa		7.52	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	CXCL1	P09341	107 aa		7.52	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	OR5AL1	P0C617	328 aa		7.52	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	SMIM17	P0DL12	118 aa		7.52	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	RPL37A	P61513	92 aa	Known RBP	7.52	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	RBX1	P62877	108 aa		7.52	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	LINC00269	Q8N2A0	174 aa		7.52	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	KCNRG	Q8N5I3	272 aa		7.52	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	7.52	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	MBD3L1	Q8WWY6	194 aa		7.52	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	IGLV10-54	A0A075B6I4	117 aa		7.51	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	MIA	Q16674	131 aa		7.51	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	RGS21	Q2M5E4	152 aa		7.51	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	TMUB2	Q71RG4	321 aa		7.51	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	AP1S3	Q96PC3	154 aa		7.51	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	SSBP4	Q9BWG4	385 aa	Predicted RBP	7.51	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	KIF25-AS1	Q9Y6Z4	181 aa		7.51	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	FAT3	Q8TDW7	4589 aa		7.51	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	TRBV25-1	A0A075B6N4	114 aa		7.5	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	PANO1	I0J062	215 aa		7.5	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	H2AFB1	P0C5Y9	115 aa		7.5	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	RPL35	P42766	123 aa	Known RBP	7.5	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	HNRNPA3	P51991	378 aa	Known RBP	7.5	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	PKIA	P61925	76 aa		7.5	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	VAX2	Q9UIW0	290 aa		7.5	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.5	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	PKHD1L1	Q86WI1	4243 aa		7.5	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	UMAD1	C9J7I0	102 aa		7.49	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	BCL2L11	O43521	198 aa		7.49	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	OXT	P01178	125 aa		7.49	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	CCL20	P78556	96 aa		7.49	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	ZNF345	Q14585	488 aa		7.49	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	TMEM97	Q5BJF2	176 aa		7.49	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	KRTAP26-1	Q6PEX3	210 aa		7.49	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	PRR34	Q9NV39	138 aa		7.49	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	GNG13	Q9P2W3	67 aa		7.49	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	IGHV1-24	A0A0C4DH33	117 aa		7.48	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	KANTR	A0A1W2PQU2	76 aa		7.48	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	RAB5C	P51148	216 aa		7.48	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	CENPW	Q5EE01	88 aa		7.48	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	SERTAD4-AS1	Q5TG53	156 aa		7.48	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	SUMO4	Q6EEV6	95 aa		7.48	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	FER1L6-AS1	Q8NA97	138 aa		7.48	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	OR2D3	Q8NGH3	330 aa		7.48	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	DAZAP1	Q96EP5	407 aa	Known RBP	7.48	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114		A0A0D9SG52	128 aa		7.47	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114		M0QY20	66 aa		7.47	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	NKX2-5	P52952	324 aa	Predicted RBP	7.47	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	REG3A	Q06141	175 aa		7.47	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	IQCJ	Q1A5X6	159 aa		7.47	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	DGAT2L7P	Q6IED9	249 aa		7.47	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	C9orf163	Q8N9P6	203 aa		7.47	□□□□□ -1.21
CDK5RAP3-223	ENST00000582114	IGLV4-60	A0A075B6I1	120 aa		7.46	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	hDV102S1	A0JD36	115 aa		7.46	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	RAB19	A4D1S5	217 aa		7.46	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	HMSD	A8MTL9	139 aa		7.46	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	IGLC6	P0CF74	106 aa		7.46	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	C20orf203	Q8NBC4	194 aa		7.46	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	GFRA4	Q9GZZ7	299 aa		7.46	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	MANBAL	Q9NQG1	85 aa		7.46	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114		H7C1H1	209 aa		7.45	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	SDIM1	Q6ZPB5	146 aa		7.45	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	C11orf52	Q96A22	123 aa		7.45	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	TMEM243	Q9BU79	118 aa		7.45	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	PLA2G2D	Q9UNK4	145 aa		7.45	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	HMCN2	Q8NDA2	5059 aa		7.44	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	C19orf71	A6NCJ1	209 aa		7.44	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	CHTF8	P0CG12	524 aa		7.44	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	GNG4	P50150	75 aa		7.44	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	RPS20	P60866	119 aa	Known RBP	7.44	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	CACNG7	P62955	275 aa		7.44	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	LYZL1	Q6UWQ5	148 aa		7.44	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	DPH3	Q96FX2	82 aa		7.44	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	IGKV3OR2-268	A0A0C4DH90	116 aa		7.43	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114		P01737	135 aa		7.43	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	EIF5A	P63241	154 aa	Known RBP	7.43	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	RASL11A	Q6T310	242 aa		7.43	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	CLRN3	Q8NCR9	226 aa		7.43	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	UBE2L6	O14933	153 aa		7.42	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	IFNA1	P01562	189 aa		7.42	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	SLPI	P03973	132 aa		7.42	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	NTF3	P20783	257 aa		7.42	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	AMT	P48728	403 aa		7.42	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	DPH3P1	Q9H4G8	78 aa		7.42	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	AP5S1	Q9NUS5	200 aa		7.42	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	TRBV20OR9-2	A0A075B6H5	130 aa		7.41	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	IGHV3-64	A0A075B6Q5	118 aa		7.41	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	TRAV8-4	A0A0B4J246	113 aa		7.41	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	TRAV26-2	A0A0B4J265	109 aa		7.41	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	XKRY2	A2RUG3	117 aa		7.41	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114		F2Z2F3	143 aa		7.41	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	TRGC1	P0CF51	173 aa		7.41	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms