RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 SMIM15Q7Z3B0 74 aa1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 CTAGE3PQ8IX95 158 aa1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 IFT20Q8IY31 132 aa1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 MAGOHBQ96A72 148 aaKnown RBP1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 TEX37Q96LM6 180 aa1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 CCL19Q99731 98 aa1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 AIF1LQ9BQI0 150 aa1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 CENPHQ9H3R5 247 aa1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 POPDC3Q9HBV1 291 aa1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 PROK2Q9HC23 129 aa1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 CHCHD2Q9Y6H1 151 aaPredicted RBP1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 KMT2CQ8NEZ4 4911 aaKnown RBP1.09□□□□□ -2.23
SMCHD1-205ENST00000581383 STAB1Q9NY15 2570 aa1.09□□□□□ -2.24
SMCHD1-205ENST00000581383 APCP25054 2843 aa1.09□□□□□ -2.24
SMCHD1-205ENST00000581383 PKD1L1Q8TDX9 2849 aa1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 A0A1W2PRE2 83 aa1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 DEFB108AA8MXU0 73 aa1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 CCL25O15444 150 aa1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 IFNA21P01568 189 aa1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 CD2P06729 351 aa1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 ROMO1P60602 79 aa1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 SARNPP82979 210 aaKnown RBP1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 DR1Q01658 176 aa1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 C1orf140Q5VVS0 124 aa1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 COMMD6Q7Z4G1 85 aa1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 PLPP5Q8NEB5 264 aa1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 OR5D14Q8NGL3 314 aa1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 OR4K15Q8NH41 348 aa1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 GRPEL2Q8TAA5 225 aa1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 BOKQ9UMX3 212 aaPredicted RBP1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 RNF11Q9Y3C5 154 aa1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 ASB4Q9Y574 426 aa1.08□□□□□ -2.24
SMCHD1-205ENST00000581383 CSPG4Q6UVK1 2322 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 SNRNP200O75643 2136 aaKnown RBP1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 COL6A5A8TX70 2615 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 HRNRQ86YZ3 2850 aaPredicted RBP1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 CUBNO60494 3623 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 DCHS2Q6V1P9 2916 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 HYDINQ4G0P3 5121 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 TRBV6-4A0A1B0GX49 114 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 ATP6V1G2-DDX39BF2Z307 99 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 CRYGSP22914 178 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 GNG11P61952 73 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 RPL38P63173 70 aaKnown RBP1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 RTL8BQ17RB0 113 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 SLC48A1Q6P1K1 146 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 C4orf22Q6V702 233 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 MORN4Q8NDC4 146 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 NUP35Q8NFH5 326 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 OR5D16Q8NGK9 328 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 POP5Q969H6 163 aaKnown RBP1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 BORCS8Q96FH0 119 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 ZNF714Q96N38 554 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 EFCAB11Q9BUY7 163 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 RTL8AQ9BWD3 113 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 OTORQ9NRC9 128 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 LY96Q9Y6Y9 160 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 TACC2O95359 2948 aa1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 PRKDCP78527 4128 aaKnown RBP1.07□□□□□ -2.24
SMCHD1-205ENST00000581383 SACSQ9NZJ4 4579 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 FLNAP21333 2647 aaKnown RBP1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 NSD1Q96L73 2696 aaPredicted RBP1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 HERC2O95714 4834 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 ESPL1Q14674 2120 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 MEGF8Q7Z7M0 2845 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 A0A096LNT2 108 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 GNG14A0A1W2PPG7 69 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 LYNX1G3V0Z9 82 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 H7BYZ3 331 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 IGLV1-51P01701 117 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 C6orf52Q5T4I8 152 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 C1orf134Q5TEV5 83 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 C2orf82Q6UX34 121 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 ZCCHC23Q6ZST2 131 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 CROCCP2Q86T23 111 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 ANGPTL5Q86XS5 388 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 C4orf33Q8N1A6 199 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 TP53RKQ96S44 253 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 BPESC1Q9GZL8 116 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 NDUFAF1Q9Y375 327 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 PRRC2CQ9Y520 2896 aaKnown RBP1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 KIAA1549Q9HCM3 1950 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 ABCA13Q86UQ4 5058 aa1.06□□□□□ -2.24
SMCHD1-205ENST00000581383 ACANP16112 2415 aa1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 CMYA5Q8N3K9 4069 aa1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 TLN2Q9Y4G6 2542 aa1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 TRDV1A0A1B0GX56 115 aa1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 GABARAPH6UMI1 98 aa1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 RER1O15258 196 aa1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 SMIM24O75264 130 aa1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 LINC00032P0C843 101 aa1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 DSCR4P56555 118 aaPredicted RBP1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 HBBP68871 147 aa1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 KLRD1Q13241 179 aa1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 NCMAPQ5T1S8 102 aa1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 HRCT1Q6UXD1 115 aa1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 C3orf62Q6ZUJ4 267 aa1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 PRR15Q8IV56 129 aa1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms