RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 MRAP2Q96G30 205 aa7.26□□□□□ -1.25
CCDC47-203ENST00000580986 YPEL4Q96NS1 127 aa7.26□□□□□ -1.25
CCDC47-203ENST00000580986 SMCO4Q9NRQ5 59 aa7.26□□□□□ -1.25
CCDC47-203ENST00000580986 PPP1R17O96001 155 aa7.25□□□□□ -1.25
CCDC47-203ENST00000580986 PPBPP02775 128 aa7.25□□□□□ -1.25
CCDC47-203ENST00000580986 MT-ND6P03923 174 aa7.25□□□□□ -1.25
CCDC47-203ENST00000580986 LINC00694P0DN24 101 aa7.25□□□□□ -1.25
CCDC47-203ENST00000580986 CAMPP49913 170 aa7.25□□□□□ -1.25
CCDC47-203ENST00000580986 SSTP61278 116 aa7.25□□□□□ -1.25
CCDC47-203ENST00000580986 MRPL23Q16540 153 aaKnown RBP7.25□□□□□ -1.25
CCDC47-203ENST00000580986 RNF185Q96GF1 192 aa7.25□□□□□ -1.25
CCDC47-203ENST00000580986 DNAJC30Q96LL9 226 aa7.25□□□□□ -1.25
CCDC47-203ENST00000580986 GNB1LQ9BYB4 327 aa7.25□□□□□ -1.25
CCDC47-203ENST00000580986 ICOSQ9Y6W8 199 aa7.25□□□□□ -1.25
CCDC47-203ENST00000580986 URGCP-MRPS24S4R325 110 aa7.25□□□□□ -1.25
CCDC47-203ENST00000580986 TRBV7-3A0A075B6L6 115 aa7.24□□□□□ -1.25
CCDC47-203ENST00000580986 A0A096LPF7 62 aa7.24□□□□□ -1.25
CCDC47-203ENST00000580986 IGHV3-73A0A0B4J1V6 119 aa7.24□□□□□ -1.25
CCDC47-203ENST00000580986 IGLL5B9A064 214 aa7.24□□□□□ -1.25
CCDC47-203ENST00000580986 F5H697 171 aa7.24□□□□□ -1.25
CCDC47-203ENST00000580986 ATP6V1G1O75348 118 aa7.24□□□□□ -1.25
CCDC47-203ENST00000580986 HLA-DQA1P01909 254 aa7.24□□□□□ -1.25
CCDC47-203ENST00000580986 MGPP08493 103 aa7.24□□□□□ -1.25
CCDC47-203ENST00000580986 RAB4AP20338 218 aa7.24□□□□□ -1.25
CCDC47-203ENST00000580986 TIRAPP58753 221 aa7.24□□□□□ -1.25
CCDC47-203ENST00000580986 SUMO4Q6EEV6 95 aa7.24□□□□□ -1.25
CCDC47-203ENST00000580986 Q6ZSN1 163 aa7.24□□□□□ -1.25
CCDC47-203ENST00000580986 AMN1Q8IY45 258 aa7.24□□□□□ -1.25
CCDC47-203ENST00000580986 APLNQ9ULZ1 77 aa7.24□□□□□ -1.25
CCDC47-203ENST00000580986 TRBV6-5A0A0K0K1A5 114 aa7.23□□□□□ -1.25
CCDC47-203ENST00000580986 PHOX2AO14813 284 aa7.23□□□□□ -1.25
CCDC47-203ENST00000580986 GYPEP15421 78 aa7.23□□□□□ -1.25
CCDC47-203ENST00000580986 RPL36AP83881 106 aaKnown RBP7.23□□□□□ -1.25
CCDC47-203ENST00000580986 TMEM136Q6ZRR5 245 aa7.23□□□□□ -1.25
CCDC47-203ENST00000580986 RPL36ALQ969Q0 106 aaKnown RBP7.23□□□□□ -1.25
CCDC47-203ENST00000580986 NIT2Q9NQR4 276 aa7.23□□□□□ -1.25
CCDC47-203ENST00000580986 A0A0J9YY99 117 aa7.22□□□□□ -1.25
CCDC47-203ENST00000580986 SRIP30626 198 aa7.22□□□□□ -1.25
CCDC47-203ENST00000580986 MRPL51Q4U2R6 128 aaKnown RBP7.22□□□□□ -1.25
CCDC47-203ENST00000580986 ZFAND6Q6FIF0 208 aa7.22□□□□□ -1.25
CCDC47-203ENST00000580986 NEGR1Q7Z3B1 354 aa7.22□□□□□ -1.25
CCDC47-203ENST00000580986 NEXN-AS1Q8NBZ9 246 aa7.22□□□□□ -1.25
CCDC47-203ENST00000580986 LAMTOR2Q9Y2Q5 125 aa7.22□□□□□ -1.25
CCDC47-203ENST00000580986 STARD9Q9P2P6 4700 aa7.22□□□□□ -1.25
CCDC47-203ENST00000580986 UBE2D3P61077 147 aa7.21□□□□□ -1.26
CCDC47-203ENST00000580986 UBE2D2P62837 147 aa7.21□□□□□ -1.26
CCDC47-203ENST00000580986 RPL32P62910 135 aaKnown RBP7.21□□□□□ -1.26
CCDC47-203ENST00000580986 DAZ4Q86SG3 579 aaKnown RBP7.21□□□□□ -1.26
CCDC47-203ENST00000580986 CBLN2Q8IUK8 224 aa7.21□□□□□ -1.26
CCDC47-203ENST00000580986 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.21□□□□□ -1.26
CCDC47-203ENST00000580986 DAZ3Q9NR90 486 aaKnown RBP7.21□□□□□ -1.26
CCDC47-203ENST00000580986 TGIF2-C20orf24A0A0A6YYL0 155 aa7.2□□□□□ -1.26
CCDC47-203ENST00000580986 LOC100131303A0A0U1RQF7 123 aa7.2□□□□□ -1.26
CCDC47-203ENST00000580986 NUDT3O95989 172 aa7.2□□□□□ -1.26
CCDC47-203ENST00000580986 P0DMU3 169 aa7.2□□□□□ -1.26
CCDC47-203ENST00000580986 FAM231AP0DMU4 169 aa7.2□□□□□ -1.26
CCDC47-203ENST00000580986 FAM231CP0DMU5 169 aa7.2□□□□□ -1.26
CCDC47-203ENST00000580986 TMEM97Q5BJF2 176 aa7.2□□□□□ -1.26
CCDC47-203ENST00000580986 ORMDL3Q8N138 153 aa7.2□□□□□ -1.26
CCDC47-203ENST00000580986 NRACQ8N912 160 aa7.2□□□□□ -1.26
CCDC47-203ENST00000580986 ZNRF2Q8NHG8 242 aa7.2□□□□□ -1.26
CCDC47-203ENST00000580986 C20orf78Q9BR46 151 aa7.2□□□□□ -1.26
CCDC47-203ENST00000580986 TNFRSF18Q9Y5U5 241 aa7.2□□□□□ -1.26
CCDC47-203ENST00000580986 TENM2Q9NT68 2774 aa7.19□□□□□ -1.26
CCDC47-203ENST00000580986 TRAV26-2A0A0B4J265 109 aa7.19□□□□□ -1.26
CCDC47-203ENST00000580986 PRSS47A8MTI9 375 aa7.19□□□□□ -1.26
CCDC47-203ENST00000580986 CKS2P33552 79 aa7.19□□□□□ -1.26
CCDC47-203ENST00000580986 CCL18P55774 89 aa7.19□□□□□ -1.26
CCDC47-203ENST00000580986 OR10J3Q5JRS4 329 aa7.19□□□□□ -1.26
CCDC47-203ENST00000580986 LGALS9CQ6DKI2 356 aa7.19□□□□□ -1.26
CCDC47-203ENST00000580986 ATP6V0E2Q8NHE4 81 aa7.19□□□□□ -1.26
CCDC47-203ENST00000580986 UPK3BQ9BT76 320 aa7.19□□□□□ -1.26
CCDC47-203ENST00000580986 GTSF1LQ9H1H1 148 aa7.19□□□□□ -1.26
CCDC47-203ENST00000580986 Q9UF83 564 aa7.19□□□□□ -1.26
CCDC47-203ENST00000580986 TRBV27A0A0K0K1C4 114 aa7.18□□□□□ -1.26
CCDC47-203ENST00000580986 GAGE12JA6NER3 117 aa7.18□□□□□ -1.26
CCDC47-203ENST00000580986 D6R8Y8 96 aa7.18□□□□□ -1.26
CCDC47-203ENST00000580986 NCR2O95944 276 aa7.18□□□□□ -1.26
CCDC47-203ENST00000580986 APCSP02743 223 aa7.18□□□□□ -1.26
CCDC47-203ENST00000580986 POLR2KP53803 58 aaKnown RBP7.18□□□□□ -1.26
CCDC47-203ENST00000580986 SUMO2P61956 95 aaKnown RBP7.18□□□□□ -1.26
CCDC47-203ENST00000580986 GAGE1Q13065 139 aa7.18□□□□□ -1.26
CCDC47-203ENST00000580986 GAGE4Q13068 117 aa7.18□□□□□ -1.26
CCDC47-203ENST00000580986 GAGE5Q13069 117 aa7.18□□□□□ -1.26
CCDC47-203ENST00000580986 GAGE13Q4V321 117 aa7.18□□□□□ -1.26
CCDC47-203ENST00000580986 TMEM70Q9BUB7 260 aa7.18□□□□□ -1.26
CCDC47-203ENST00000580986 SDHAF1A6NFY7 115 aa7.17□□□□□ -1.26
CCDC47-203ENST00000580986 COLCA2A8K830 154 aa7.17□□□□□ -1.26
CCDC47-203ENST00000580986 TCAPO15273 167 aa7.17□□□□□ -1.26
CCDC47-203ENST00000580986 TNFRSF6BO95407 300 aa7.17□□□□□ -1.26
CCDC47-203ENST00000580986 RPS10P46783 165 aaKnown RBP7.17□□□□□ -1.26
CCDC47-203ENST00000580986 LELP1Q5T871 98 aa7.17□□□□□ -1.26
CCDC47-203ENST00000580986 LYPD5Q6UWN5 251 aa7.17□□□□□ -1.26
CCDC47-203ENST00000580986 RPL39LQ96EH5 51 aaKnown RBP7.17□□□□□ -1.26
CCDC47-203ENST00000580986 PRELID3AQ96N28 172 aa7.17□□□□□ -1.26
CCDC47-203ENST00000580986 ST20Q9HBF5 79 aa7.17□□□□□ -1.26
CCDC47-203ENST00000580986 MRPS16Q9Y3D3 137 aaKnown RBP7.17□□□□□ -1.26
CCDC47-203ENST00000580986 PLECQ15149 4684 aaKnown RBP7.17□□□□□ -1.26
CCDC47-203ENST00000580986 K7EMI3 77 aa7.16□□□□□ -1.26
CCDC47-203ENST00000580986 GAS8-AS1O95177 125 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms