RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 FGF8P55075 233 aaPredicted RBP4.67□□□□□ -1.66
SMARCE1-217ENST00000580654 SMIM15Q7Z3B0 74 aa4.67□□□□□ -1.66
SMARCE1-217ENST00000580654 ZNF664Q8N3J9 261 aa4.67□□□□□ -1.66
SMARCE1-217ENST00000580654 TMEM75Q8N9X5 138 aa4.67□□□□□ -1.66
SMARCE1-217ENST00000580654 PRSS3P2Q8NHM4 247 aa4.67□□□□□ -1.66
SMARCE1-217ENST00000580654 TMED6Q8WW62 240 aa4.67□□□□□ -1.66
SMARCE1-217ENST00000580654 KCNS1Q96KK3 526 aa4.67□□□□□ -1.66
SMARCE1-217ENST00000580654 MAP1LC3CQ9BXW4 147 aa4.67□□□□□ -1.66
SMARCE1-217ENST00000580654 PRR34Q9NV39 138 aa4.67□□□□□ -1.66
SMARCE1-217ENST00000580654 IGKV2-24A0A0C4DH68 120 aa4.66□□□□□ -1.66
SMARCE1-217ENST00000580654 TMEM262E9PQX1 116 aa4.66□□□□□ -1.66
SMARCE1-217ENST00000580654 FAUP35544 74 aaKnown RBP4.66□□□□□ -1.66
SMARCE1-217ENST00000580654 ZNF80P51504 273 aaPredicted RBP4.66□□□□□ -1.66
SMARCE1-217ENST00000580654 TAS2R30P59541 319 aa4.66□□□□□ -1.66
SMARCE1-217ENST00000580654 CTF1Q16619 201 aa4.66□□□□□ -1.66
SMARCE1-217ENST00000580654 COX19Q49B96 90 aa4.66□□□□□ -1.66
SMARCE1-217ENST00000580654 CLPSL2Q6UWE3 100 aa4.66□□□□□ -1.66
SMARCE1-217ENST00000580654 Q6ZRP5 223 aa4.66□□□□□ -1.66
SMARCE1-217ENST00000580654 MIR17HGQ75NE6 70 aa4.66□□□□□ -1.66
SMARCE1-217ENST00000580654 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.66□□□□□ -1.66
SMARCE1-217ENST00000580654 RSL24D1Q9UHA3 163 aaKnown RBP4.66□□□□□ -1.66
SMARCE1-217ENST00000580654 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.65□□□□□ -1.67
SMARCE1-217ENST00000580654 C7orf66A4D0T2 115 aa4.65□□□□□ -1.67
SMARCE1-217ENST00000580654 A8MWV9 139 aa4.65□□□□□ -1.67
SMARCE1-217ENST00000580654 SMIM18P0DKX4 95 aa4.65□□□□□ -1.67
SMARCE1-217ENST00000580654 CSN1S1P47710 185 aa4.65□□□□□ -1.67
SMARCE1-217ENST00000580654 UBE2D3P61077 147 aa4.65□□□□□ -1.67
SMARCE1-217ENST00000580654 RANP62826 216 aaKnown RBP4.65□□□□□ -1.67
SMARCE1-217ENST00000580654 UBE2D2P62837 147 aa4.65□□□□□ -1.67
SMARCE1-217ENST00000580654 NDUFA5Q16718 116 aa4.65□□□□□ -1.67
SMARCE1-217ENST00000580654 BOD1L2Q8IYS8 172 aa4.65□□□□□ -1.67
SMARCE1-217ENST00000580654 OR2G3Q8NGZ4 309 aa4.65□□□□□ -1.67
SMARCE1-217ENST00000580654 MCFD2Q8NI22 146 aa4.65□□□□□ -1.67
SMARCE1-217ENST00000580654 DYNC2LI1Q8TCX1 351 aa4.65□□□□□ -1.67
SMARCE1-217ENST00000580654 IGLV10-54A0A075B6I4 117 aa4.64□□□□□ -1.67
SMARCE1-217ENST00000580654 A0A096LNI7 61 aa4.64□□□□□ -1.67
SMARCE1-217ENST00000580654 TRBV6-8A0A0A6YYG3 113 aa4.64□□□□□ -1.67
SMARCE1-217ENST00000580654 TMEM238C9JI98 176 aa4.64□□□□□ -1.67
SMARCE1-217ENST00000580654 M0R036 132 aa4.64□□□□□ -1.67
SMARCE1-217ENST00000580654 RPL13AP40429 203 aaKnown RBP4.64□□□□□ -1.67
SMARCE1-217ENST00000580654 CACNG7P62955 275 aa4.64□□□□□ -1.67
SMARCE1-217ENST00000580654 UQCC3Q6UW78 93 aa4.64□□□□□ -1.67
SMARCE1-217ENST00000580654 LINC00269Q8N2A0 174 aa4.64□□□□□ -1.67
SMARCE1-217ENST00000580654 OR2D3Q8NGH3 330 aa4.64□□□□□ -1.67
SMARCE1-217ENST00000580654 PACRGQ96M98 296 aaPredicted RBP4.64□□□□□ -1.67
SMARCE1-217ENST00000580654 UBE2L5PA0A1B0GUS4 154 aa4.63□□□□□ -1.67
SMARCE1-217ENST00000580654 CST7O76096 145 aa4.63□□□□□ -1.67
SMARCE1-217ENST00000580654 NKX2-5P52952 324 aaPredicted RBP4.63□□□□□ -1.67
SMARCE1-217ENST00000580654 LGALSLQ3ZCW2 172 aaPredicted RBP4.63□□□□□ -1.67
SMARCE1-217ENST00000580654 PYDC2Q56P42 97 aa4.63□□□□□ -1.67
SMARCE1-217ENST00000580654 TOMM5Q8N4H5 51 aa4.63□□□□□ -1.67
SMARCE1-217ENST00000580654 SLC25A21Q9BQT8 299 aaPredicted RBP4.63□□□□□ -1.67
SMARCE1-217ENST00000580654 UQCC1Q9NVA1 299 aa4.63□□□□□ -1.67
SMARCE1-217ENST00000580654 RBX1P62877 108 aa4.62□□□□□ -1.67
SMARCE1-217ENST00000580654 BAXQ07812 192 aa4.62□□□□□ -1.67
SMARCE1-217ENST00000580654 PIK3CD-AS1Q5SR53 167 aa4.62□□□□□ -1.67
SMARCE1-217ENST00000580654 NTM-AS1Q6ZSK4 140 aa4.62□□□□□ -1.67
SMARCE1-217ENST00000580654 C15orf56Q8N910 161 aa4.62□□□□□ -1.67
SMARCE1-217ENST00000580654 GFRA4Q9GZZ7 299 aa4.62□□□□□ -1.67
SMARCE1-217ENST00000580654 C11orf1Q9H5F2 150 aa4.62□□□□□ -1.67
SMARCE1-217ENST00000580654 GSKIPQ9P0R6 139 aa4.62□□□□□ -1.67
SMARCE1-217ENST00000580654 C9orf170A2RU37 121 aa4.61□□□□□ -1.67
SMARCE1-217ENST00000580654 PTTG1O95997 202 aa4.61□□□□□ -1.67
SMARCE1-217ENST00000580654 IFNA7P01567 189 aa4.61□□□□□ -1.67
SMARCE1-217ENST00000580654 FGF7P21781 194 aa4.61□□□□□ -1.67
SMARCE1-217ENST00000580654 PNRC1Q12796 327 aaPredicted RBP4.61□□□□□ -1.67
SMARCE1-217ENST00000580654 IAH1Q2TAA2 248 aaPredicted RBP4.61□□□□□ -1.67
SMARCE1-217ENST00000580654 GOLT1AQ6ZVE7 132 aa4.61□□□□□ -1.67
SMARCE1-217ENST00000580654 ISOC2Q96AB3 205 aa4.61□□□□□ -1.67
SMARCE1-217ENST00000580654 HYLS1Q96M11 299 aa4.61□□□□□ -1.67
SMARCE1-217ENST00000580654 CHCHD5Q9BSY4 110 aa4.61□□□□□ -1.67
SMARCE1-217ENST00000580654 NPCDR1Q9BY65 106 aa4.61□□□□□ -1.67
SMARCE1-217ENST00000580654 SLIRPQ9GZT3 109 aaKnown RBP4.61□□□□□ -1.67
SMARCE1-217ENST00000580654 V9GYY9 64 aa4.61□□□□□ -1.67
SMARCE1-217ENST00000580654 TRBV7-3A0A075B6L6 115 aa4.6□□□□□ -1.67
SMARCE1-217ENST00000580654 IGKV3D-20A0A0C4DH25 116 aa4.6□□□□□ -1.67
SMARCE1-217ENST00000580654 TRBV10-1A0A0K0K1A3 114 aa4.6□□□□□ -1.67
SMARCE1-217ENST00000580654 M0QXV9 152 aa4.6□□□□□ -1.67
SMARCE1-217ENST00000580654 RHODO00212 210 aa4.6□□□□□ -1.67
SMARCE1-217ENST00000580654 GCGP01275 180 aa4.6□□□□□ -1.67
SMARCE1-217ENST00000580654 KRTAP1-4P0C5Y4 121 aa4.6□□□□□ -1.67
SMARCE1-217ENST00000580654 RPS10P46783 165 aaKnown RBP4.6□□□□□ -1.67
SMARCE1-217ENST00000580654 RPL36AP83881 106 aaKnown RBP4.6□□□□□ -1.67
SMARCE1-217ENST00000580654 REG3AQ06141 175 aa4.6□□□□□ -1.67
SMARCE1-217ENST00000580654 FAM74A4Q5TZK3 123 aa4.6□□□□□ -1.67
SMARCE1-217ENST00000580654 ZFP82Q8N141 532 aa4.6□□□□□ -1.67
SMARCE1-217ENST00000580654 OR10G8Q8NGN5 311 aa4.6□□□□□ -1.67
SMARCE1-217ENST00000580654 RPL36ALQ969Q0 106 aaKnown RBP4.6□□□□□ -1.67
SMARCE1-217ENST00000580654 NMES1Q9C002 83 aa4.6□□□□□ -1.67
SMARCE1-217ENST00000580654 IGSF23A1L1A6 192 aa4.59□□□□□ -1.67
SMARCE1-217ENST00000580654 OR7C2O60412 319 aa4.59□□□□□ -1.67
SMARCE1-217ENST00000580654 RAB5CP51148 216 aa4.59□□□□□ -1.67
SMARCE1-217ENST00000580654 GNG5P63218 68 aa4.59□□□□□ -1.67
SMARCE1-217ENST00000580654 UBE2L3P68036 154 aaKnown RBP4.59□□□□□ -1.67
SMARCE1-217ENST00000580654 GAGE6Q13070 117 aa4.59□□□□□ -1.67
SMARCE1-217ENST00000580654 C20orf203Q8NBC4 194 aa4.59□□□□□ -1.67
SMARCE1-217ENST00000580654 MRPS26Q9BYN8 205 aaKnown RBP4.59□□□□□ -1.67
SMARCE1-217ENST00000580654 OTORQ9NRC9 128 aa4.59□□□□□ -1.67
SMARCE1-217ENST00000580654 IGLV1-50A0A075B6I6 118 aa4.58□□□□□ -1.68
SMARCE1-217ENST00000580654 EIF3GO75821 320 aaKnown RBP eCLIP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms