RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 RBP2P50120 134 aa1.84□□□□□ -2.11
KPNB1-208ENST00000580019 FOXA3P55318 350 aaPredicted RBP1.84□□□□□ -2.11
KPNB1-208ENST00000580019 ZNF90Q03938 601 aa1.84□□□□□ -2.11
KPNB1-208ENST00000580019 RELAQ04206 551 aa1.84□□□□□ -2.11
KPNB1-208ENST00000580019 SPANXN5Q5MJ07 72 aa1.84□□□□□ -2.11
KPNB1-208ENST00000580019 GLIPR1L1Q6UWM5 242 aa1.84□□□□□ -2.11
KPNB1-208ENST00000580019 TMEM91Q6ZNR0 172 aa1.84□□□□□ -2.11
KPNB1-208ENST00000580019 HMGN2P46Q86SG4 172 aa1.84□□□□□ -2.11
KPNB1-208ENST00000580019 ATOH7Q8N100 152 aa1.84□□□□□ -2.11
KPNB1-208ENST00000580019 DEDD2Q8WXF8 326 aa1.84□□□□□ -2.11
KPNB1-208ENST00000580019 C14orf144Q96I85 54 aa1.84□□□□□ -2.11
KPNB1-208ENST00000580019 PPP3R2Q96LZ3 170 aa1.84□□□□□ -2.11
KPNB1-208ENST00000580019 PSMG3Q9BT73 122 aaPredicted RBP1.84□□□□□ -2.11
KPNB1-208ENST00000580019 CXCL16Q9H2A7 254 aa1.84□□□□□ -2.11
KPNB1-208ENST00000580019 TAS2R4Q9NYW5 299 aa1.84□□□□□ -2.11
KPNB1-208ENST00000580019 LY96Q9Y6Y9 160 aa1.84□□□□□ -2.11
KPNB1-208ENST00000580019 HLA-DRB4X5D2U9 266 aa1.84□□□□□ -2.11
KPNB1-208ENST00000580019 TNRC6AQ8NDV7 1962 aaKnown RBP1.84□□□□□ -2.11
KPNB1-208ENST00000580019 MYOFQ9NZM1 2061 aa1.84□□□□□ -2.12
KPNB1-208ENST00000580019 CPAMD8Q8IZJ3 1885 aa1.84□□□□□ -2.12
KPNB1-208ENST00000580019 MALRD1Q5VYJ5 2156 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 RYR1P21817 5038 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 CHD3Q12873 2000 aaKnown RBP1.83□□□□□ -2.12
KPNB1-208ENST00000580019 IGLV2-18A0A075B6J9 118 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 IGLV3-9A0A075B6K5 115 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 PNMA8CA0A1B0GUJ8 204 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 LOC107986453A0A1B0GWG9 222 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 OR51F1A6NGY5 319 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 CORTO00230 105 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 CDC42EP2O14613 210 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 YPEL1O60688 119 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 CLPSP04118 112 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 SLC25A5P05141 298 aaKnown RBP1.83□□□□□ -2.12
KPNB1-208ENST00000580019 SAA1P0DJI8 122 aaPredicted RBP1.83□□□□□ -2.12
KPNB1-208ENST00000580019 HINT1P49773 126 aaPredicted RBP1.83□□□□□ -2.12
KPNB1-208ENST00000580019 TMEM258P61165 79 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 SNRPD3P62318 126 aaKnown RBP1.83□□□□□ -2.12
KPNB1-208ENST00000580019 CDK5R1Q15078 307 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 ESRGQ1W209 222 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 IZUMO2Q6UXV1 221 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 TEN1Q86WV5 123 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 RPS19BP1Q86WX3 136 aaKnown RBP1.83□□□□□ -2.12
KPNB1-208ENST00000580019 LINC00471Q8N535 108 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 RNF182Q8N6D2 247 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 LINC00301Q8NCQ3 95 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 OR5D14Q8NGL3 314 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 CMTM2Q8TAZ6 248 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 CHCHD1Q96BP2 118 aaKnown RBP1.83□□□□□ -2.12
KPNB1-208ENST00000580019 PKMYT1Q99640 499 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 RETNLBQ9BQ08 111 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 RERGLQ9H628 205 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 C14orf132Q9NPU4 83 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 COA4Q9NYJ1 87 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 R4GN34 69 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 HYDINQ4G0P3 5121 aa1.83□□□□□ -2.12
KPNB1-208ENST00000580019 PLXNA2O75051 1894 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 CACNA1CQ13936 2221 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 DYNC2H1Q8NCM8 4307 aaKnown RBP1.82□□□□□ -2.12
KPNB1-208ENST00000580019 A0A0G2JMM0 328 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 FAM236AA0A1B0GUQ0 79 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 FAM236BA0A1B0GV22 79 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 A0A1W2PPB8 328 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 COLCA2A8K830 154 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 HMSDA8MTL9 139 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 KIR3DP1A8MWS1 328 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 G3V3Q6 166 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 OR1I1O60431 355 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 PROSCO94903 275 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 RBP4P02753 201 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 SHBGP04278 402 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 KRTAP1-4P0C5Y4 121 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 HMGA1P17096 107 aaKnown RBP1.82□□□□□ -2.12
KPNB1-208ENST00000580019 GNG4P50150 75 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 NNATQ16517 81 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 LY6EQ16553 131 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 ZNF181Q2M3W8 571 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.82□□□□□ -2.12
KPNB1-208ENST00000580019 COPS9Q8WXC6 57 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 COMMD3Q9UBI1 195 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 METTL1Q9UBP6 276 aaKnown RBP1.82□□□□□ -2.12
KPNB1-208ENST00000580019 TPRKBQ9Y3C4 175 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 CCDC88CQ9P219 2028 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 HRNRQ86YZ3 2850 aaPredicted RBP1.82□□□□□ -2.12
KPNB1-208ENST00000580019 SEC16AO15027 2179 aa1.82□□□□□ -2.12
KPNB1-208ENST00000580019 INTS1Q8N201 2190 aaKnown RBP1.82□□□□□ -2.12
KPNB1-208ENST00000580019 SACSQ9NZJ4 4579 aa1.81□□□□□ -2.12
KPNB1-208ENST00000580019 TANC2Q9HCD6 1990 aa1.81□□□□□ -2.12
KPNB1-208ENST00000580019 UNC13CQ8NB66 2214 aa1.81□□□□□ -2.12
KPNB1-208ENST00000580019 IGKV2-28A0A075B6P5 120 aa1.81□□□□□ -2.12
KPNB1-208ENST00000580019 A0A1B0GVG6 124 aa1.81□□□□□ -2.12
KPNB1-208ENST00000580019 IGKV2D-28P01615 120 aa1.81□□□□□ -2.12
KPNB1-208ENST00000580019 PMP2P02689 132 aa1.81□□□□□ -2.12
KPNB1-208ENST00000580019 CTSDP07339 412 aaPredicted RBP1.81□□□□□ -2.12
KPNB1-208ENST00000580019 BAALC-AS2P0C853 105 aa1.81□□□□□ -2.12
KPNB1-208ENST00000580019 AKAIN1P0CW23 69 aa1.81□□□□□ -2.12
KPNB1-208ENST00000580019 PCBD1P61457 104 aa1.81□□□□□ -2.12
KPNB1-208ENST00000580019 PPP3R1P63098 170 aa1.81□□□□□ -2.12
KPNB1-208ENST00000580019 ERHP84090 104 aaKnown RBP1.81□□□□□ -2.12
KPNB1-208ENST00000580019 EIF4EBP1Q13541 118 aaPredicted RBP1.81□□□□□ -2.12
KPNB1-208ENST00000580019 PYDC2Q56P42 97 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms