RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 COL4A2P08572 1712 aa7.7□□□□□ -1.18
MSI2-209ENST00000579483 TRAV8-4A0A0B4J246 113 aa7.69□□□□□ -1.18
MSI2-209ENST00000579483 H3BQ85 93 aa7.69□□□□□ -1.18
MSI2-209ENST00000579483 GAGE2BQ13066 116 aa7.69□□□□□ -1.18
MSI2-209ENST00000579483 LINC00482Q8N8I6 264 aa7.69□□□□□ -1.18
MSI2-209ENST00000579483 IGKV1D-37A0A075B6S9 117 aa7.69□□□□□ -1.18
MSI2-209ENST00000579483 IFITM1P13164 125 aa7.69□□□□□ -1.18
MSI2-209ENST00000579483 Q9H8V8 135 aa7.69□□□□□ -1.18
MSI2-209ENST00000579483 GAGE2EQ4V326 116 aa7.68□□□□□ -1.18
MSI2-209ENST00000579483 COX7B2Q8TF08 81 aa7.68□□□□□ -1.18
MSI2-209ENST00000579483 ZNF747Q9BV97 191 aa7.68□□□□□ -1.18
MSI2-209ENST00000579483 GAGE2DQ9UEU5 116 aa7.68□□□□□ -1.18
MSI2-209ENST00000579483 K7EN84 100 aa7.68□□□□□ -1.18
MSI2-209ENST00000579483 SOCS3O14543 225 aa7.68□□□□□ -1.18
MSI2-209ENST00000579483 RBMY1FQ15415 496 aaKnown RBP7.68□□□□□ -1.18
MSI2-209ENST00000579483 RNASE13Q5GAN3 156 aaKnown RBP7.68□□□□□ -1.18
MSI2-209ENST00000579483 BVES-AS1Q5T3Y7 98 aa7.68□□□□□ -1.18
MSI2-209ENST00000579483 ZFAND3Q9H8U3 227 aa7.68□□□□□ -1.18
MSI2-209ENST00000579483 NHLRC4P0CG21 123 aaPredicted RBP7.68□□□□□ -1.18
MSI2-209ENST00000579483 ZNF664Q8N3J9 261 aa7.68□□□□□ -1.18
MSI2-209ENST00000579483 LYPD6BQ8NI32 183 aa7.68□□□□□ -1.18
MSI2-209ENST00000579483 AVPP01185 164 aa7.68□□□□□ -1.18
MSI2-209ENST00000579483 Q6ZTI0 123 aa7.68□□□□□ -1.18
MSI2-209ENST00000579483 TIMM17AQ99595 171 aa7.68□□□□□ -1.18
MSI2-209ENST00000579483 MDFICQ9P1T7 246 aa7.68□□□□□ -1.18
MSI2-209ENST00000579483 Q6ZVH6 145 aa7.67□□□□□ -1.18
MSI2-209ENST00000579483 FAM110AQ9BQ89 295 aa7.67□□□□□ -1.18
MSI2-209ENST00000579483 TRBV6-4A0A1B0GX49 114 aa7.67□□□□□ -1.18
MSI2-209ENST00000579483 C21orf62-AS1Q17RA5 79 aa7.67□□□□□ -1.18
MSI2-209ENST00000579483 RPL39LQ96EH5 51 aaKnown RBP7.67□□□□□ -1.18
MSI2-209ENST00000579483 KMT2EQ8IZD2 1858 aa7.67□□□□□ -1.18
MSI2-209ENST00000579483 TRBV20-1A0A075B6N2 111 aa7.67□□□□□ -1.18
MSI2-209ENST00000579483 C9JQL5 133 aa7.67□□□□□ -1.18
MSI2-209ENST00000579483 ANKRD11Q6UB99 2663 aaPredicted RBP7.67□□□□□ -1.18
MSI2-209ENST00000579483 IGHV4-28A0A0C4DH34 117 aa7.66□□□□□ -1.18
MSI2-209ENST00000579483 SIVA1O15304 175 aa7.66□□□□□ -1.18
MSI2-209ENST00000579483 EIF4EBP1Q13541 118 aaPredicted RBP7.66□□□□□ -1.18
MSI2-209ENST00000579483 UTF1Q5T230 341 aa7.66□□□□□ -1.18
MSI2-209ENST00000579483 CEP295Q9C0D2 2601 aa7.66□□□□□ -1.18
MSI2-209ENST00000579483 BRI3O95415 125 aa7.66□□□□□ -1.18
MSI2-209ENST00000579483 CRIP2P52943 208 aaPredicted RBP7.66□□□□□ -1.18
MSI2-209ENST00000579483 OXLD1Q5BKU9 147 aa7.66□□□□□ -1.18
MSI2-209ENST00000579483 C10orf99Q6UWK7 81 aa7.66□□□□□ -1.18
MSI2-209ENST00000579483 DSCR8Q96T75 97 aa7.66□□□□□ -1.18
MSI2-209ENST00000579483 ADCYAP1P18509 176 aa7.65□□□□□ -1.18
MSI2-209ENST00000579483 C7orf33Q8WU49 177 aa7.65□□□□□ -1.18
MSI2-209ENST00000579483 ZFYVE26Q68DK2 2539 aa7.65□□□□□ -1.18
MSI2-209ENST00000579483 IGHV4-30-4P0DP06 118 aa7.65□□□□□ -1.19
MSI2-209ENST00000579483 SORL1Q92673 2214 aa7.65□□□□□ -1.19
MSI2-209ENST00000579483 JMJD1CQ15652 2540 aa7.65□□□□□ -1.19
MSI2-209ENST00000579483 MRPL52Q86TS9 123 aaKnown RBP7.65□□□□□ -1.19
MSI2-209ENST00000579483 MYO9AB2RTY4 2548 aa7.64□□□□□ -1.19
MSI2-209ENST00000579483 GAGE12HA6NDE8 117 aa7.64□□□□□ -1.19
MSI2-209ENST00000579483 LY6G6CO95867 125 aa7.64□□□□□ -1.19
MSI2-209ENST00000579483 BRWD1-AS2P59051 145 aa7.64□□□□□ -1.19
MSI2-209ENST00000579483 DEFB1P60022 68 aa7.64□□□□□ -1.19
MSI2-209ENST00000579483 B9D2Q9BPU9 175 aa7.64□□□□□ -1.19
MSI2-209ENST00000579483 REG3AQ06141 175 aa7.64□□□□□ -1.19
MSI2-209ENST00000579483 ASPHD1Q5U4P2 390 aa7.64□□□□□ -1.19
MSI2-209ENST00000579483 EP400Q96L91 3159 aa7.64□□□□□ -1.19
MSI2-209ENST00000579483 PRR14LQ5THK1 2151 aa7.63□□□□□ -1.19
MSI2-209ENST00000579483 A0A1W2PPR1 153 aa7.63□□□□□ -1.19
MSI2-209ENST00000579483 C20orf203Q8NBC4 194 aa7.63□□□□□ -1.19
MSI2-209ENST00000579483 MSRB1Q9NZV6 116 aa7.63□□□□□ -1.19
MSI2-209ENST00000579483 PRO1854Q9UHT4 67 aa7.63□□□□□ -1.19
MSI2-209ENST00000579483 IGHV1-58A0A0C4DH39 117 aa7.63□□□□□ -1.19
MSI2-209ENST00000579483 CRIP3Q6Q6R5 217 aa7.63□□□□□ -1.19
MSI2-209ENST00000579483 IGLV1-51P01701 117 aa7.63□□□□□ -1.19
MSI2-209ENST00000579483 C10orf91Q5T1B1 145 aa7.63□□□□□ -1.19
MSI2-209ENST00000579483 UFSP1Q6NVU6 142 aa7.63□□□□□ -1.19
MSI2-209ENST00000579483 TRAV12-1A0A0B4J245 112 aa7.62□□□□□ -1.19
MSI2-209ENST00000579483 A0A0J9YXV3 536 aa7.62□□□□□ -1.19
MSI2-209ENST00000579483 H0YGX0 51 aa7.62□□□□□ -1.19
MSI2-209ENST00000579483 GATA1P15976 413 aaPredicted RBP7.62□□□□□ -1.19
MSI2-209ENST00000579483 C1orf229Q6ZS94 237 aaPredicted RBP7.62□□□□□ -1.19
MSI2-209ENST00000579483 ZNF462Q96JM2 2506 aa7.62□□□□□ -1.19
MSI2-209ENST00000579483 KIR3DS1Q14943 382 aa7.62□□□□□ -1.19
MSI2-209ENST00000579483 MIAQ16674 131 aa7.62□□□□□ -1.19
MSI2-209ENST00000579483 UBL5Q9BZL1 73 aa7.62□□□□□ -1.19
MSI2-209ENST00000579483 SPTBN4Q9H254 2564 aa7.62□□□□□ -1.19
MSI2-209ENST00000579483 NACAE9PAV3 2078 aa7.62□□□□□ -1.19
MSI2-209ENST00000579483 FASNP49327 2511 aaKnown RBP7.62□□□□□ -1.19
MSI2-209ENST00000579483 FUSP35637 526 aaKnown RBP eCLIP7.62□□□□□ -1.19
MSI2-209ENST00000579483 KPRPQ5T749 579 aaPredicted RBP7.62□□□□□ -1.19
MSI2-209ENST00000579483 U3KQK5 164 aa7.62□□□□□ -1.19
MSI2-209ENST00000579483 LRRK2Q5S007 2527 aa7.61□□□□□ -1.19
MSI2-209ENST00000579483 RS1O15537 224 aa7.61□□□□□ -1.19
MSI2-209ENST00000579483 ZFAND6Q6FIF0 208 aa7.61□□□□□ -1.19
MSI2-209ENST00000579483 SND1-IT1Q9HBX3 110 aa7.61□□□□□ -1.19
MSI2-209ENST00000579483 COX8AP10176 69 aa7.61□□□□□ -1.19
MSI2-209ENST00000579483 TOMM6Q96B49 74 aa7.61□□□□□ -1.19
MSI2-209ENST00000579483 CITED1Q99966 193 aa7.61□□□□□ -1.19
MSI2-209ENST00000579483 C11orf1Q9H5F2 150 aa7.61□□□□□ -1.19
MSI2-209ENST00000579483 C19orf71A6NCJ1 209 aa7.6□□□□□ -1.19
MSI2-209ENST00000579483 A0A1B0GV90 55 aa7.6□□□□□ -1.19
MSI2-209ENST00000579483 TDRG1Q3Y452 100 aa7.6□□□□□ -1.19
MSI2-209ENST00000579483 MPV17L2Q567V2 206 aa7.6□□□□□ -1.19
MSI2-209ENST00000579483 PIK3CD-AS1Q5SR53 167 aa7.6□□□□□ -1.19
MSI2-209ENST00000579483 LINC00322Q6ZN03 302 aaPredicted RBP7.6□□□□□ -1.19
MSI2-209ENST00000579483 MRGPRG-AS1Q2M3A8 158 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms