RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 FAM30AQ9NZY2 134 aa7.6□□□□□ -1.19
SSH2-208ENST00000579040 VAX2Q9UIW0 290 aa7.6□□□□□ -1.19
SSH2-208ENST00000579040 SRRM2Q9UQ35 2752 aaKnown RBP7.6□□□□□ -1.19
SSH2-208ENST00000579040 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.59□□□□□ -1.19
SSH2-208ENST00000579040 PDE6DO43924 150 aa7.59□□□□□ -1.19
SSH2-208ENST00000579040 SULT1A2P50226 295 aa7.59□□□□□ -1.19
SSH2-208ENST00000579040 DAZAP1Q96EP5 407 aaKnown RBP7.59□□□□□ -1.19
SSH2-208ENST00000579040 DNAJC30Q96LL9 226 aa7.59□□□□□ -1.19
SSH2-208ENST00000579040 KIF25-AS1Q9Y6Z4 181 aa7.59□□□□□ -1.19
SSH2-208ENST00000579040 MUC21A0A0G2JKD1 596 aa7.58□□□□□ -1.2
SSH2-208ENST00000579040 MUC21A0A140T8X8 626 aa7.58□□□□□ -1.2
SSH2-208ENST00000579040 XKRY2A2RUG3 117 aa7.58□□□□□ -1.2
SSH2-208ENST00000579040 C19orf71A6NCJ1 209 aa7.58□□□□□ -1.2
SSH2-208ENST00000579040 TMEM262E9PQX1 116 aa7.58□□□□□ -1.2
SSH2-208ENST00000579040 IFNA1P01562 189 aa7.58□□□□□ -1.2
SSH2-208ENST00000579040 IGLV2-8P01709 118 aa7.58□□□□□ -1.2
SSH2-208ENST00000579040 CRPP02741 224 aa7.58□□□□□ -1.2
SSH2-208ENST00000579040 IGLC6P0CF74 106 aa7.58□□□□□ -1.2
SSH2-208ENST00000579040 GNG4P50150 75 aa7.58□□□□□ -1.2
SSH2-208ENST00000579040 MEF2BQ02080 365 aaPredicted RBP7.58□□□□□ -1.2
SSH2-208ENST00000579040 C14orf177Q52M58 125 aa7.58□□□□□ -1.2
SSH2-208ENST00000579040 TCTE3Q8IZS6 198 aa7.58□□□□□ -1.2
SSH2-208ENST00000579040 FER1L6-AS1Q8NA97 138 aa7.58□□□□□ -1.2
SSH2-208ENST00000579040 OR2D3Q8NGH3 330 aa7.58□□□□□ -1.2
SSH2-208ENST00000579040 CHCHD5Q9BSY4 110 aa7.58□□□□□ -1.2
SSH2-208ENST00000579040 C1orf43Q9BWL3 253 aa7.58□□□□□ -1.2
SSH2-208ENST00000579040 BIN3Q9NQY0 253 aa7.58□□□□□ -1.2
SSH2-208ENST00000579040 H7C1H1 209 aa7.57□□□□□ -1.2
SSH2-208ENST00000579040 CACNG7P62955 275 aa7.57□□□□□ -1.2
SSH2-208ENST00000579040 MPV17L2Q567V2 206 aa7.57□□□□□ -1.2
SSH2-208ENST00000579040 ENHOQ6UWT2 76 aa7.57□□□□□ -1.2
SSH2-208ENST00000579040 C15orf54Q8N8G6 183 aa7.57□□□□□ -1.2
SSH2-208ENST00000579040 A0A1B0GVG6 124 aa7.56□□□□□ -1.2
SSH2-208ENST00000579040 F2Z2F3 143 aa7.56□□□□□ -1.2
SSH2-208ENST00000579040 P01737 135 aa7.56□□□□□ -1.2
SSH2-208ENST00000579040 ANGP03950 147 aaKnown RBP7.56□□□□□ -1.2
SSH2-208ENST00000579040 PLA2G1BP04054 148 aaKnown RBP7.56□□□□□ -1.2
SSH2-208ENST00000579040 BCL2P10415 239 aa7.56□□□□□ -1.2
SSH2-208ENST00000579040 TAGLN2P37802 199 aaKnown RBP7.56□□□□□ -1.2
SSH2-208ENST00000579040 SSTP61278 116 aa7.56□□□□□ -1.2
SSH2-208ENST00000579040 MIAQ16674 131 aa7.56□□□□□ -1.2
SSH2-208ENST00000579040 NTM-AS1Q6ZSK4 140 aa7.56□□□□□ -1.2
SSH2-208ENST00000579040 SLC51BQ86UW2 128 aa7.56□□□□□ -1.2
SSH2-208ENST00000579040 TPPP3Q9BW30 176 aa7.56□□□□□ -1.2
SSH2-208ENST00000579040 TRBV20OR9-2A0A075B6H5 130 aa7.55□□□□□ -1.2
SSH2-208ENST00000579040 TRBV25-1A0A075B6N4 114 aa7.55□□□□□ -1.2
SSH2-208ENST00000579040 RAB19A4D1S5 217 aa7.55□□□□□ -1.2
SSH2-208ENST00000579040 M0QY20 66 aa7.55□□□□□ -1.2
SSH2-208ENST00000579040 MGPP08493 103 aa7.55□□□□□ -1.2
SSH2-208ENST00000579040 TRGC1P0CF51 173 aa7.55□□□□□ -1.2
SSH2-208ENST00000579040 GZMBP10144 247 aa7.55□□□□□ -1.2
SSH2-208ENST00000579040 IQCJQ1A5X6 159 aa7.55□□□□□ -1.2
SSH2-208ENST00000579040 MED9Q9NWA0 146 aa7.55□□□□□ -1.2
SSH2-208ENST00000579040 VPS13BQ7Z7G8 4022 aa7.55□□□□□ -1.2
SSH2-208ENST00000579040 IGHV1-24A0A0C4DH33 117 aa7.54□□□□□ -1.2
SSH2-208ENST00000579040 WDR73Q6P4I2 378 aa7.54□□□□□ -1.2
SSH2-208ENST00000579040 LINC00528Q8N1L1 170 aa7.54□□□□□ -1.2
SSH2-208ENST00000579040 PRR34Q9NV39 138 aa7.54□□□□□ -1.2
SSH2-208ENST00000579040 CTRLP40313 264 aa7.53□□□□□ -1.2
SSH2-208ENST00000579040 RBX1P62877 108 aa7.53□□□□□ -1.2
SSH2-208ENST00000579040 LINC01620Q4KN68 170 aa7.53□□□□□ -1.2
SSH2-208ENST00000579040 SUMO4Q6EEV6 95 aa7.53□□□□□ -1.2
SSH2-208ENST00000579040 RASL11AQ6T310 242 aa7.53□□□□□ -1.2
SSH2-208ENST00000579040 SCXQ7RTU7 201 aa7.53□□□□□ -1.2
SSH2-208ENST00000579040 CHAC1Q9BUX1 264 aa7.53□□□□□ -1.2
SSH2-208ENST00000579040 DPH3P1Q9H4G8 78 aa7.53□□□□□ -1.2
SSH2-208ENST00000579040 USP17L23D6RBM5 183 aa7.52□□□□□ -1.21
SSH2-208ENST00000579040 HLA-DQA1P01909 254 aa7.52□□□□□ -1.21
SSH2-208ENST00000579040 GAGE6Q13070 117 aa7.52□□□□□ -1.21
SSH2-208ENST00000579040 LYZL1Q6UWQ5 148 aa7.52□□□□□ -1.21
SSH2-208ENST00000579040 C9orf62Q8N4C0 152 aa7.52□□□□□ -1.21
SSH2-208ENST00000579040 CNFNQ9BYD5 112 aa7.52□□□□□ -1.21
SSH2-208ENST00000579040 NTF3P20783 257 aa7.51□□□□□ -1.21
SSH2-208ENST00000579040 LINC00269Q8N2A0 174 aa7.51□□□□□ -1.21
SSH2-208ENST00000579040 NUDT10Q8NFP7 164 aa7.51□□□□□ -1.21
SSH2-208ENST00000579040 NUDT11Q96G61 164 aa7.51□□□□□ -1.21
SSH2-208ENST00000579040 PGLYRP4Q96LB8 373 aa7.51□□□□□ -1.21
SSH2-208ENST00000579040 TMEM243Q9BU79 118 aa7.51□□□□□ -1.21
SSH2-208ENST00000579040 NIT2Q9NQR4 276 aa7.51□□□□□ -1.21
SSH2-208ENST00000579040 FAT1Q14517 4588 aa7.5□□□□□ -1.21
SSH2-208ENST00000579040 A0A1B0GUV1 79 aa7.5□□□□□ -1.21
SSH2-208ENST00000579040 NKX2-5P52952 324 aaPredicted RBP7.5□□□□□ -1.21
SSH2-208ENST00000579040 DGAT2L7PQ6IED9 249 aa7.5□□□□□ -1.21
SSH2-208ENST00000579040 KRTAP26-1Q6PEX3 210 aa7.5□□□□□ -1.21
SSH2-208ENST00000579040 RPP21Q9H633 154 aaKnown RBP7.5□□□□□ -1.21
SSH2-208ENST00000579040 hCG_2014768A0A024R1R8 64 aa7.49□□□□□ -1.21
SSH2-208ENST00000579040 TRAV8-4A0A0B4J246 113 aa7.49□□□□□ -1.21
SSH2-208ENST00000579040 TMEM250H0YL14 139 aa7.49□□□□□ -1.21
SSH2-208ENST00000579040 REG3AQ06141 175 aa7.49□□□□□ -1.21
SSH2-208ENST00000579040 CLPSL2Q6UWE3 100 aa7.49□□□□□ -1.21
SSH2-208ENST00000579040 Q6ZNX1 250 aa7.49□□□□□ -1.21
SSH2-208ENST00000579040 CIRBP-AS1Q8TBR5 109 aa7.49□□□□□ -1.21
SSH2-208ENST00000579040 DEFB104AQ8WTQ1 72 aa7.49□□□□□ -1.21
SSH2-208ENST00000579040 K7EN84 100 aa7.48□□□□□ -1.21
SSH2-208ENST00000579040 PRSS1P07477 247 aa7.48□□□□□ -1.21
SSH2-208ENST00000579040 BLOC1S1P78537 153 aa7.48□□□□□ -1.21
SSH2-208ENST00000579040 COTL1Q14019 142 aa7.48□□□□□ -1.21
SSH2-208ENST00000579040 TWIST1Q15672 202 aa7.48□□□□□ -1.21
SSH2-208ENST00000579040 AKAP14Q86UN6 197 aa7.48□□□□□ -1.21
SSH2-208ENST00000579040 C20orf203Q8NBC4 194 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms