RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 HIGD1CA8MV81 97 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 A8MWV9 139 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 IGLL5B9A064 214 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 F2Z2F3 143 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 F5H768 121 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 K7EQD1 137 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 M0R381 172 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 GATCO43716 136 aaKnown RBP2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 CIDEAO60543 219 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 GAS8-AS1O95177 125 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 P0DMU3 169 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 FAM231AP0DMU4 169 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 FAM231CP0DMU5 169 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 HTN3P15516 51 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 NTF3P20783 257 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 EVI2AP22794 236 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 PNRC1Q12796 327 aaPredicted RBP2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 ADIRFQ15847 76 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 ESRGQ1W209 222 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 RNF212Q495C1 297 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 LGALS9CQ6DKI2 356 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 ZFP82Q8N141 532 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 C15orf53Q8NAA6 179 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 NUP35Q8NFH5 326 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 OR10G8Q8NGN5 311 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 ZNRF2Q8NHG8 242 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 RNF185Q96GF1 192 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 YPEL4Q96NS1 127 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 BIN3Q9NQY0 253 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 KLK5Q9Y337 293 aaPredicted RBP2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 LINC00588Q9Y4M8 146 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 IGHV3-73A0A0B4J1V6 119 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 A8MWL6 223 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 M0QY20 66 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 RHODO00212 210 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 S100A4P26447 101 aaKnown RBP2.58□□□□□ -2
SMARCE1-215ENST00000578995 TIRAPP58753 221 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 KRTAP10-5P60370 271 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 ERVFC1-1P60608 527 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 CACNG7P62955 275 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 SUMO4Q6EEV6 95 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 ATRAIDQ6UW56 229 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 Q6ZR54 194 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 SLC7A5P1Q8MH63 180 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 NEXN-AS1Q8NBZ9 246 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 OR4C5Q8NGB2 326 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 PGLYRP4Q96LB8 373 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 UPK3BQ9BT76 320 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 HHLA3Q9XRX5 114 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 PHLDA3Q9Y5J5 127 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 DNAH8Q96JB1 4490 aa2.58□□□□□ -2
SMARCE1-215ENST00000578995 A0A087WWC5 75 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 TRGV4A0A0C4DH28 118 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 TRBV10-1A0A0K0K1A3 114 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 A0A1B0GUT8 65 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 XKRY2A2RUG3 117 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 C7orf77A4D0Y5 90 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 F8W036 122 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 RPS10P46783 165 aaKnown RBP2.57□□□□□ -2
SMARCE1-215ENST00000578995 RAB4BP61018 213 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 UBE2D3P61077 147 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 UBE2D2P62837 147 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 SLAQ13239 276 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 RHOHQ15669 191 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 SPANXN1Q5VSR9 72 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 LYPD5Q6UWN5 251 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 NTM-AS1Q6ZSK4 140 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 C15orf54Q8N8G6 183 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 NRACQ8N912 160 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 CLRN3Q8NCR9 226 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 DAZAP1Q96EP5 407 aaKnown RBP2.57□□□□□ -2
SMARCE1-215ENST00000578995 AP1S3Q96PC3 154 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 TMEM191AQ9H0A3 160 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 DPH3P1Q9H4G8 78 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 TMEM242Q9NWH2 141 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 NAT8BQ9UHF3 227 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 MRPS16Q9Y3D3 137 aaKnown RBP2.57□□□□□ -2
SMARCE1-215ENST00000578995 ICOSQ9Y6W8 199 aa2.57□□□□□ -2
SMARCE1-215ENST00000578995 APOBP04114 4563 aaKnown RBP2.57□□□□□ -2
SMARCE1-215ENST00000578995 TRAV26-2A0A0B4J265 109 aa2.56□□□□□ -2
SMARCE1-215ENST00000578995 TRBV6-5A0A0K0K1A5 114 aa2.56□□□□□ -2
SMARCE1-215ENST00000578995 PPP1R2P9O14990 202 aa2.56□□□□□ -2
SMARCE1-215ENST00000578995 DNAH10OSP0CZ25 163 aa2.56□□□□□ -2
SMARCE1-215ENST00000578995 RAB4AP20338 218 aa2.56□□□□□ -2
SMARCE1-215ENST00000578995 FAM3BP58499 235 aaPredicted RBP2.56□□□□□ -2
SMARCE1-215ENST00000578995 MRPL23Q16540 153 aaKnown RBP2.56□□□□□ -2
SMARCE1-215ENST00000578995 FAM74A4Q5TZK3 123 aa2.56□□□□□ -2
SMARCE1-215ENST00000578995 FAM104BQ5XKR9 115 aa2.56□□□□□ -2
SMARCE1-215ENST00000578995 Q6ZRN7 208 aaPredicted RBP2.56□□□□□ -2
SMARCE1-215ENST00000578995 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
SMARCE1-215ENST00000578995 NEGR1Q7Z3B1 354 aa2.56□□□□□ -2
SMARCE1-215ENST00000578995 ATP5L2Q7Z4Y8 100 aa2.56□□□□□ -2
SMARCE1-215ENST00000578995 WFDC10BQ8IUB3 73 aa2.56□□□□□ -2
SMARCE1-215ENST00000578995 AMN1Q8IY45 258 aa2.56□□□□□ -2
SMARCE1-215ENST00000578995 FRZBQ92765 325 aa2.56□□□□□ -2
SMARCE1-215ENST00000578995 ANAPC16Q96DE5 110 aa2.56□□□□□ -2
SMARCE1-215ENST00000578995 RPL39LQ96EH5 51 aaKnown RBP2.56□□□□□ -2
SMARCE1-215ENST00000578995 IMMP2LQ96T52 175 aa2.56□□□□□ -2
SMARCE1-215ENST00000578995 TPPP3Q9BW30 176 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms