RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 F6UZH7 168 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 IFNGP01579 166 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 S100PP25815 95 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 FXYD6P3P58550 94 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 TPPP2P59282 170 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 RPL37P61927 97 aaKnown RBP0.62□□□□□ -2.31
COPS3-213ENST00000577210 SPINK13Q1W4C9 94 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 Q56UQ5 140 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 Q5BKY6 102 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 C9orf153Q5TBE3 101 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 PP6455Q8WZ26 134 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 SCN3BQ9NY72 215 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 V9GYV3 84 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 MAP3K1Q13233 1512 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 LAMB1P07942 1786 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 HFM1A2PYH4 1435 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 CLIP1P30622 1438 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 CNTLNQ9NXG0 1405 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 ATG2AQ2TAZ0 1938 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 AKAP11Q9UKA4 1901 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 A2ML1A8K2U0 1454 aa0.61□□□□□ -2.31
COPS3-213ENST00000577210 IFT140Q96RY7 1462 aa0.61□□□□□ -2.31
COPS3-213ENST00000577210 KMT2BQ9UMN6 2715 aaPredicted RBP0.61□□□□□ -2.31
COPS3-213ENST00000577210 APOC4-APOC2K7ER74 178 aa0.61□□□□□ -2.31
COPS3-213ENST00000577210 APOC2P02655 101 aa0.61□□□□□ -2.31
COPS3-213ENST00000577210 EDDM3BP56851 147 aa0.61□□□□□ -2.31
COPS3-213ENST00000577210 SPINK9Q5DT21 86 aa0.61□□□□□ -2.31
COPS3-213ENST00000577210 C12orf73Q69YU5 71 aa0.61□□□□□ -2.31
COPS3-213ENST00000577210 TMEM203Q969S6 136 aa0.61□□□□□ -2.31
COPS3-213ENST00000577210 C12orf57Q99622 126 aa0.61□□□□□ -2.31
COPS3-213ENST00000577210 LINC00312Q9Y6C7 94 aa0.61□□□□□ -2.31
COPS3-213ENST00000577210 MYH7P12883 1935 aa0.61□□□□□ -2.31
COPS3-213ENST00000577210 RRBP1Q9P2E9 1410 aaKnown RBP0.61□□□□□ -2.31
COPS3-213ENST00000577210 ANKRD50Q9ULJ7 1429 aa0.61□□□□□ -2.31
COPS3-213ENST00000577210 ARAP2Q8WZ64 1704 aa0.61□□□□□ -2.31
COPS3-213ENST00000577210 NWD2Q9ULI1 1742 aa0.61□□□□□ -2.31
COPS3-213ENST00000577210 SNRNP200O75643 2136 aaKnown RBP0.61□□□□□ -2.31
COPS3-213ENST00000577210 GAPVD1Q14C86 1478 aa0.61□□□□□ -2.31
COPS3-213ENST00000577210 LMTK2Q8IWU2 1503 aa0.6□□□□□ -2.31
COPS3-213ENST00000577210 A0A087WXM4 84 aa0.6□□□□□ -2.31
COPS3-213ENST00000577210 TRBV7-1A0A0A6YYK4 115 aa0.6□□□□□ -2.31
COPS3-213ENST00000577210 PIGBOS1A0A0B4J2F0 54 aa0.6□□□□□ -2.31
COPS3-213ENST00000577210 CLPSL1A2RUU4 121 aa0.6□□□□□ -2.31
COPS3-213ENST00000577210 HCG22E2RYF7 251 aa0.6□□□□□ -2.31
COPS3-213ENST00000577210 TRAPPC2P0DI81 140 aa0.6□□□□□ -2.31
COPS3-213ENST00000577210 TRAPPC2BP0DI82 140 aa0.6□□□□□ -2.31
COPS3-213ENST00000577210 ACYP2P14621 99 aa0.6□□□□□ -2.31
COPS3-213ENST00000577210 GNG4P50150 75 aa0.6□□□□□ -2.31
COPS3-213ENST00000577210 BTG2P78543 158 aa0.6□□□□□ -2.31
COPS3-213ENST00000577210 DCDP81605 110 aaKnown RBP0.6□□□□□ -2.31
COPS3-213ENST00000577210 ZNF818PQ6ZRF7 136 aa0.6□□□□□ -2.31
COPS3-213ENST00000577210 C14orf144Q96I85 54 aa0.6□□□□□ -2.31
COPS3-213ENST00000577210 PPP3R2Q96LZ3 170 aa0.6□□□□□ -2.31
COPS3-213ENST00000577210 AQP10Q96PS8 301 aa0.6□□□□□ -2.31
COPS3-213ENST00000577210 AP4S1Q9Y587 144 aa0.6□□□□□ -2.31
COPS3-213ENST00000577210 CPSF1Q10570 1443 aaKnown RBP0.6□□□□□ -2.31
COPS3-213ENST00000577210 TNS1Q9HBL0 1735 aaKnown RBP0.59□□□□□ -2.31
COPS3-213ENST00000577210 UACAQ9BZF9 1416 aa0.59□□□□□ -2.31
COPS3-213ENST00000577210 ASCC3Q8N3C0 2202 aaKnown RBP0.59□□□□□ -2.31
COPS3-213ENST00000577210 TRGV1A0A0A0MS02 117 aa0.59□□□□□ -2.31
COPS3-213ENST00000577210 A0A0D9SG42 100 aa0.59□□□□□ -2.31
COPS3-213ENST00000577210 OOSP1A8MZH6 123 aa0.59□□□□□ -2.31
COPS3-213ENST00000577210 RBP2P50120 134 aa0.59□□□□□ -2.31
COPS3-213ENST00000577210 PPP3R1P63098 170 aa0.59□□□□□ -2.31
COPS3-213ENST00000577210 CCL8P80075 99 aa0.59□□□□□ -2.31
COPS3-213ENST00000577210 C10orf128Q5T292 105 aa0.59□□□□□ -2.31
COPS3-213ENST00000577210 S100ZQ8WXG8 99 aa0.59□□□□□ -2.31
COPS3-213ENST00000577210 Q9H521 79 aa0.59□□□□□ -2.31
COPS3-213ENST00000577210 SCP2D1Q9UJQ7 156 aa0.59□□□□□ -2.31
COPS3-213ENST00000577210 LOC285556D6RIA3 1793 aa0.59□□□□□ -2.32
COPS3-213ENST00000577210 NCOA2Q15596 1464 aa0.59□□□□□ -2.32
COPS3-213ENST00000577210 PHIPQ8WWQ0 1821 aa0.59□□□□□ -2.32
COPS3-213ENST00000577210 ROBO1Q9Y6N7 1651 aa0.59□□□□□ -2.32
COPS3-213ENST00000577210 ABCA10Q8WWZ4 1543 aa0.59□□□□□ -2.32
COPS3-213ENST00000577210 FAM135AQ9P2D6 1515 aa0.59□□□□□ -2.32
COPS3-213ENST00000577210 TRAV1-2A0A0B4J238 106 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 CORTO00230 105 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 PDCD5O14737 125 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 MPC2O95563 127 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 CFDP00746 253 aaPredicted RBP0.58□□□□□ -2.32
COPS3-213ENST00000577210 S100A8P05109 93 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 SMIM6P0DI80 62 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 PKIAP61925 76 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 PYY3Q5JQD4 70 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 C9orf62Q8N4C0 152 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 TTC9CQ8N5M4 171 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 TSLPQ969D9 159 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 Q96NJ1 140 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 TCEAL7Q9BRU2 100 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 BPESC1Q9GZL8 116 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 POLA1P09884 1462 aaPredicted RBP0.58□□□□□ -2.32
COPS3-213ENST00000577210 PZPP20742 1482 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 FYCO1Q9BQS8 1478 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 FANCD2Q9BXW9 1451 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 MAPKBP1O60336 1514 aa0.58□□□□□ -2.32
COPS3-213ENST00000577210 LRRC37A3O60309 1634 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 SCRIBQ14160 1630 aa0.57□□□□□ -2.32
COPS3-213ENST00000577210 TROQ12816 1431 aaPredicted RBP0.57□□□□□ -2.32
COPS3-213ENST00000577210 ANKARQ7Z5J8 1434 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms