RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 KCNRGQ8N5I3 272 aa9.88□□□□□ -0.83
CTNS-209ENST00000574776 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.88□□□□□ -0.83
CTNS-209ENST00000574776 LRP1Q07954 4544 aaKnown RBP9.88□□□□□ -0.83
CTNS-209ENST00000574776 USP17L23D6RBM5 183 aa9.87□□□□□ -0.83
CTNS-209ENST00000574776 NTM-AS1Q6ZSK4 140 aa9.87□□□□□ -0.83
CTNS-209ENST00000574776 UMAD1C9J7I0 102 aa9.86□□□□□ -0.83
CTNS-209ENST00000574776 PFDN1O60925 122 aa9.86□□□□□ -0.83
CTNS-209ENST00000574776 HLA-DQA1P01909 254 aa9.86□□□□□ -0.83
CTNS-209ENST00000574776 OR5AL1P0C617 328 aa9.86□□□□□ -0.83
CTNS-209ENST00000574776 RGS21Q2M5E4 152 aa9.86□□□□□ -0.83
CTNS-209ENST00000574776 KIF25-AS1Q9Y6Z4 181 aa9.86□□□□□ -0.83
CTNS-209ENST00000574776 IGLV2-8P01709 118 aa9.85□□□□□ -0.83
CTNS-209ENST00000574776 PRSS1P07477 247 aa9.85□□□□□ -0.83
CTNS-209ENST00000574776 H2AFB1P0C5Y9 115 aa9.85□□□□□ -0.83
CTNS-209ENST00000574776 SMIM17P0DL12 118 aa9.85□□□□□ -0.83
CTNS-209ENST00000574776 GAGE6Q13070 117 aa9.85□□□□□ -0.83
CTNS-209ENST00000574776 DERL1Q9BUN8 251 aa9.85□□□□□ -0.83
CTNS-209ENST00000574776 PKIAP61925 76 aa9.84□□□□□ -0.83
CTNS-209ENST00000574776 RBX1P62877 108 aa9.84□□□□□ -0.83
CTNS-209ENST00000574776 ZNF345Q14585 488 aa9.84□□□□□ -0.83
CTNS-209ENST00000574776 MIAQ16674 131 aa9.84□□□□□ -0.83
CTNS-209ENST00000574776 TMEM97Q5BJF2 176 aa9.84□□□□□ -0.83
CTNS-209ENST00000574776 CLPSL2Q6UWE3 100 aa9.84□□□□□ -0.83
CTNS-209ENST00000574776 LINC00269Q8N2A0 174 aa9.84□□□□□ -0.83
CTNS-209ENST00000574776 VAX2Q9UIW0 290 aa9.84□□□□□ -0.83
CTNS-209ENST00000574776 RPL35P42766 123 aaKnown RBP9.83□□□□□ -0.84
CTNS-209ENST00000574776 PRR34Q9NV39 138 aa9.83□□□□□ -0.84
CTNS-209ENST00000574776 TRBV25-1A0A075B6N4 114 aa9.82□□□□□ -0.84
CTNS-209ENST00000574776 A0A0D9SG52 128 aa9.82□□□□□ -0.84
CTNS-209ENST00000574776 HMSDA8MTL9 139 aa9.82□□□□□ -0.84
CTNS-209ENST00000574776 OXTP01178 125 aa9.82□□□□□ -0.84
CTNS-209ENST00000574776 GZMBP10144 247 aa9.82□□□□□ -0.84
CTNS-209ENST00000574776 CCL20P78556 96 aa9.82□□□□□ -0.84
CTNS-209ENST00000574776 DGAT2L7PQ6IED9 249 aa9.82□□□□□ -0.84
CTNS-209ENST00000574776 KRTAP26-1Q6PEX3 210 aa9.82□□□□□ -0.84
CTNS-209ENST00000574776 TPPP3Q9BW30 176 aa9.82□□□□□ -0.84
CTNS-209ENST00000574776 KANTRA0A1W2PQU2 76 aa9.81□□□□□ -0.84
CTNS-209ENST00000574776 SERTAD4-AS1Q5TG53 156 aa9.81□□□□□ -0.84
CTNS-209ENST00000574776 C9orf163Q8N9P6 203 aa9.81□□□□□ -0.84
CTNS-209ENST00000574776 AP1S3Q96PC3 154 aa9.81□□□□□ -0.84
CTNS-209ENST00000574776 FAT3Q8TDW7 4589 aa9.81□□□□□ -0.84
CTNS-209ENST00000574776 M0QY20 66 aa9.8□□□□□ -0.84
CTNS-209ENST00000574776 BCL2L11O43521 198 aa9.8□□□□□ -0.84
CTNS-209ENST00000574776 MGPP08493 103 aa9.8□□□□□ -0.84
CTNS-209ENST00000574776 RPL37AP61513 92 aaKnown RBP9.8□□□□□ -0.84
CTNS-209ENST00000574776 DAZAP1Q96EP5 407 aaKnown RBP9.8□□□□□ -0.84
CTNS-209ENST00000574776 GNG13Q9P2W3 67 aa9.8□□□□□ -0.84
CTNS-209ENST00000574776 IGLV10-54A0A075B6I4 117 aa9.79□□□□□ -0.84
CTNS-209ENST00000574776 IGHV1-24A0A0C4DH33 117 aa9.79□□□□□ -0.84
CTNS-209ENST00000574776 IQCJQ1A5X6 159 aa9.79□□□□□ -0.84
CTNS-209ENST00000574776 FER1L6-AS1Q8NA97 138 aa9.79□□□□□ -0.84
CTNS-209ENST00000574776 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.79□□□□□ -0.84
CTNS-209ENST00000574776 PANO1I0J062 215 aa9.78□□□□□ -0.84
CTNS-209ENST00000574776 IGLC6P0CF74 106 aa9.78□□□□□ -0.84
CTNS-209ENST00000574776 EIF5AP63241 154 aaKnown RBP9.78□□□□□ -0.84
CTNS-209ENST00000574776 REG3AQ06141 175 aa9.78□□□□□ -0.84
CTNS-209ENST00000574776 CENPWQ5EE01 88 aa9.78□□□□□ -0.84
CTNS-209ENST00000574776 SUMO4Q6EEV6 95 aa9.78□□□□□ -0.84
CTNS-209ENST00000574776 SDIM1Q6ZPB5 146 aa9.78□□□□□ -0.84
CTNS-209ENST00000574776 OR2D3Q8NGH3 330 aa9.78□□□□□ -0.84
CTNS-209ENST00000574776 C11orf52Q96A22 123 aa9.78□□□□□ -0.84
CTNS-209ENST00000574776 MANBALQ9NQG1 85 aa9.78□□□□□ -0.84
CTNS-209ENST00000574776 RAB19A4D1S5 217 aa9.77□□□□□ -0.85
CTNS-209ENST00000574776 H7C1H1 209 aa9.77□□□□□ -0.85
CTNS-209ENST00000574776 HNRNPA3P51991 378 aaKnown RBP9.77□□□□□ -0.85
CTNS-209ENST00000574776 NKX2-5P52952 324 aaPredicted RBP9.77□□□□□ -0.85
CTNS-209ENST00000574776 RPS20P60866 119 aaKnown RBP9.77□□□□□ -0.85
CTNS-209ENST00000574776 CLRN3Q8NCR9 226 aa9.77□□□□□ -0.85
CTNS-209ENST00000574776 C19orf71A6NCJ1 209 aa9.76□□□□□ -0.85
CTNS-209ENST00000574776 RAB5CP51148 216 aa9.76□□□□□ -0.85
CTNS-209ENST00000574776 CACNG7P62955 275 aa9.76□□□□□ -0.85
CTNS-209ENST00000574776 C20orf203Q8NBC4 194 aa9.76□□□□□ -0.85
CTNS-209ENST00000574776 PKHD1L1Q86WI1 4243 aa9.76□□□□□ -0.85
CTNS-209ENST00000574776 HMCN2Q8NDA2 5059 aa9.75□□□□□ -0.85
CTNS-209ENST00000574776 IGLV4-60A0A075B6I1 120 aa9.75□□□□□ -0.85
CTNS-209ENST00000574776 TRAV1-1A0A0B4J248 108 aa9.75□□□□□ -0.85
CTNS-209ENST00000574776 hDV102S1A0JD36 115 aa9.75□□□□□ -0.85
CTNS-209ENST00000574776 GNG4P50150 75 aa9.75□□□□□ -0.85
CTNS-209ENST00000574776 RASL11AQ6T310 242 aa9.75□□□□□ -0.85
CTNS-209ENST00000574776 TMEM243Q9BU79 118 aa9.75□□□□□ -0.85
CTNS-209ENST00000574776 TRAV8-4A0A0B4J246 113 aa9.74□□□□□ -0.85
CTNS-209ENST00000574776 A0A1B0GUV1 79 aa9.74□□□□□ -0.85
CTNS-209ENST00000574776 F2Z2F3 143 aa9.74□□□□□ -0.85
CTNS-209ENST00000574776 P01737 135 aa9.74□□□□□ -0.85
CTNS-209ENST00000574776 LYZL1Q6UWQ5 148 aa9.74□□□□□ -0.85
CTNS-209ENST00000574776 GFRA4Q9GZZ7 299 aa9.74□□□□□ -0.85
CTNS-209ENST00000574776 NIT2Q9NQR4 276 aa9.74□□□□□ -0.85
CTNS-209ENST00000574776 XKRY2A2RUG3 117 aa9.73□□□□□ -0.85
CTNS-209ENST00000574776 IFNA1P01562 189 aa9.73□□□□□ -0.85
CTNS-209ENST00000574776 NTF3P20783 257 aa9.73□□□□□ -0.85
CTNS-209ENST00000574776 DPH3Q96FX2 82 aa9.73□□□□□ -0.85
CTNS-209ENST00000574776 SLPIP03973 132 aa9.72□□□□□ -0.85
CTNS-209ENST00000574776 TRGC1P0CF51 173 aa9.72□□□□□ -0.85
CTNS-209ENST00000574776 CNBPP62633 177 aaKnown RBP9.72□□□□□ -0.85
CTNS-209ENST00000574776 DPH3P1Q9H4G8 78 aa9.72□□□□□ -0.85
CTNS-209ENST00000574776 MED9Q9NWA0 146 aa9.72□□□□□ -0.85
CTNS-209ENST00000574776 TRBV20OR9-2A0A075B6H5 130 aa9.71□□□□□ -0.86
CTNS-209ENST00000574776 TEX46H3BTG2 121 aa9.71□□□□□ -0.86
CTNS-209ENST00000574776 UBE2L6O14933 153 aa9.71□□□□□ -0.86
CTNS-209ENST00000574776 MEF2BQ02080 365 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms