RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 Q6ZTI0 123 aa14.77□□□□□ -0.05
CHRNE-202ENST00000572438 MDFIQ99750 246 aa14.77□□□□□ -0.05
CHRNE-202ENST00000572438 TRBV27A0A0K0K1C4 114 aa14.76□□□□□ -0.05
CHRNE-202ENST00000572438 NUDT3O95989 172 aa14.76□□□□□ -0.05
CHRNE-202ENST00000572438 NEGR1Q7Z3B1 354 aa14.76□□□□□ -0.05
CHRNE-202ENST00000572438 OVOL2Q9BRP0 275 aa14.76□□□□□ -0.05
CHRNE-202ENST00000572438 C20orf202A1L168 122 aa14.75□□□□□ -0.05
CHRNE-202ENST00000572438 OR4C5Q8NGB2 326 aa14.75□□□□□ -0.05
CHRNE-202ENST00000572438 IFI27L1Q96BM0 104 aa14.75□□□□□ -0.05
CHRNE-202ENST00000572438 Q6ZSN1 163 aa14.74□□□□□ -0.05
CHRNE-202ENST00000572438 ZNF664Q8N3J9 261 aa14.74□□□□□ -0.05
CHRNE-202ENST00000572438 IGHV3-53P01767 116 aa14.73□□□□□ -0.05
CHRNE-202ENST00000572438 KIR2DL4Q99706 377 aa14.73□□□□□ -0.05
CHRNE-202ENST00000572438 SMIM9A6NGZ8 99 aa14.73□□□□□ -0.05
CHRNE-202ENST00000572438 H0Y8G0 127 aa14.73□□□□□ -0.05
CHRNE-202ENST00000572438 IGHV4-30-4P0DP06 118 aa14.73□□□□□ -0.05
CHRNE-202ENST00000572438 KRTAP10-11P60412 298 aa14.73□□□□□ -0.05
CHRNE-202ENST00000572438 EGFEM1PQ0D2K5 195 aa14.73□□□□□ -0.05
CHRNE-202ENST00000572438 C18orf15Q96N68 181 aa14.73□□□□□ -0.05
CHRNE-202ENST00000572438 COL6A5A8TX70 2615 aa14.72□□□□□ -0.05
CHRNE-202ENST00000572438 TRAV4A0A0B4J268 109 aa14.72□□□□□ -0.05
CHRNE-202ENST00000572438 PKIAP61925 76 aa14.72□□□□□ -0.05
CHRNE-202ENST00000572438 VAMP8Q9BV40 100 aa14.72□□□□□ -0.05
CHRNE-202ENST00000572438 X6R8D5 127 aa14.72□□□□□ -0.05
CHRNE-202ENST00000572438 P0DMU3 169 aa14.71□□□□□ -0.05
CHRNE-202ENST00000572438 FAM231AP0DMU4 169 aa14.71□□□□□ -0.05
CHRNE-202ENST00000572438 FAM231CP0DMU5 169 aa14.71□□□□□ -0.05
CHRNE-202ENST00000572438 LINC01545Q5VT33 79 aa14.71□□□□□ -0.05
CHRNE-202ENST00000572438 ZNF479Q96JC4 524 aa14.71□□□□□ -0.06
CHRNE-202ENST00000572438 PRO1933Q9H354 126 aa14.71□□□□□ -0.06
CHRNE-202ENST00000572438 ATP5LO75964 103 aa14.7□□□□□ -0.06
CHRNE-202ENST00000572438 ATOH7Q8N100 152 aa14.7□□□□□ -0.06
CHRNE-202ENST00000572438 TOMM6Q96B49 74 aa14.7□□□□□ -0.06
CHRNE-202ENST00000572438 ZMAT5Q9UDW3 170 aaKnown RBP14.7□□□□□ -0.06
CHRNE-202ENST00000572438 NACAE9PAV3 2078 aa14.7□□□□□ -0.06
CHRNE-202ENST00000572438 GAGE12BA1L429 117 aa14.69□□□□□ -0.06
CHRNE-202ENST00000572438 TSTD3H0UI37 97 aa14.69□□□□□ -0.06
CHRNE-202ENST00000572438 GAGE7O76087 117 aa14.69□□□□□ -0.06
CHRNE-202ENST00000572438 GAGE12FP0CL80 117 aa14.69□□□□□ -0.06
CHRNE-202ENST00000572438 GAGE12GP0CL81 117 aa14.69□□□□□ -0.06
CHRNE-202ENST00000572438 GAGE12IP0CL82 117 aa14.69□□□□□ -0.06
CHRNE-202ENST00000572438 DEFB135Q30KP9 77 aa14.69□□□□□ -0.06
CHRNE-202ENST00000572438 TNFRSF18Q9Y5U5 241 aa14.69□□□□□ -0.06
CHRNE-202ENST00000572438 I3L3M4 83 aa14.69□□□□□ -0.06
CHRNE-202ENST00000572438 G0S2P27469 103 aa14.69□□□□□ -0.06
CHRNE-202ENST00000572438 C2orf66Q6UXQ4 117 aa14.69□□□□□ -0.06
CHRNE-202ENST00000572438 PAM16Q9Y3D7 125 aa14.69□□□□□ -0.06
CHRNE-202ENST00000572438 TRGV2A0A075B6R0 118 aa14.68□□□□□ -0.06
CHRNE-202ENST00000572438 EMP1P54849 157 aa14.68□□□□□ -0.06
CHRNE-202ENST00000572438 NEXN-AS1Q8NBZ9 246 aa14.68□□□□□ -0.06
CHRNE-202ENST00000572438 DNAJC30Q96LL9 226 aa14.68□□□□□ -0.06
CHRNE-202ENST00000572438 LGALS9CQ6DKI2 356 aa14.67□□□□□ -0.06
CHRNE-202ENST00000572438 Q9UF83 564 aa14.67□□□□□ -0.06
CHRNE-202ENST00000572438 TSHBP01222 138 aa14.66□□□□□ -0.06
CHRNE-202ENST00000572438 DEFB104AQ8WTQ1 72 aa14.66□□□□□ -0.06
CHRNE-202ENST00000572438 TRAV9-2A0A087WT02 112 aa14.66□□□□□ -0.06
CHRNE-202ENST00000572438 CIDEAO60543 219 aa14.66□□□□□ -0.06
CHRNE-202ENST00000572438 RHOHQ15669 191 aa14.66□□□□□ -0.06
CHRNE-202ENST00000572438 SCGB3A1Q96QR1 104 aa14.66□□□□□ -0.06
CHRNE-202ENST00000572438 PMCHL2Q9BQD1 86 aa14.66□□□□□ -0.06
CHRNE-202ENST00000572438 CMYA5Q8N3K9 4069 aa14.65□□□□□ -0.06
CHRNE-202ENST00000572438 LINC01549A6NIU2 74 aa14.65□□□□□ -0.06
CHRNE-202ENST00000572438 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.65□□□□□ -0.06
CHRNE-202ENST00000572438 CYSLTR1Q9Y271 337 aa14.65□□□□□ -0.06
CHRNE-202ENST00000572438 PRSS1P07477 247 aa14.64□□□□□ -0.07
CHRNE-202ENST00000572438 OR11H2Q8NH07 326 aa14.64□□□□□ -0.07
CHRNE-202ENST00000572438 MAJINQ3KP22 176 aa14.64□□□□□ -0.07
CHRNE-202ENST00000572438 SPATA45Q537H7 98 aa14.64□□□□□ -0.07
CHRNE-202ENST00000572438 LINC00612Q8N6U2 182 aa14.64□□□□□ -0.07
CHRNE-202ENST00000572438 TP53TG1Q9Y2A0 90 aa14.64□□□□□ -0.07
CHRNE-202ENST00000572438 A8MZ25 164 aa14.63□□□□□ -0.07
CHRNE-202ENST00000572438 K7EQD1 137 aa14.63□□□□□ -0.07
CHRNE-202ENST00000572438 RNF183Q96D59 192 aa14.63□□□□□ -0.07
CHRNE-202ENST00000572438 TRBV10-1A0A0K0K1A3 114 aa14.62□□□□□ -0.07
CHRNE-202ENST00000572438 G3V4G9 280 aa14.62□□□□□ -0.07
CHRNE-202ENST00000572438 KRTAP21-3Q3LHN1 58 aa14.62□□□□□ -0.07
CHRNE-202ENST00000572438 ERASQ7Z444 233 aa14.62□□□□□ -0.07
CHRNE-202ENST00000572438 Q6ZN92 141 aa14.62□□□□□ -0.07
CHRNE-202ENST00000572438 SLC25A29Q8N8R3 303 aa14.62□□□□□ -0.07
CHRNE-202ENST00000572438 ODF1Q14990 250 aa14.61□□□□□ -0.07
CHRNE-202ENST00000572438 DEFB130BP0DP73 79 aa14.6□□□□□ -0.07
CHRNE-202ENST00000572438 DEFB130AP0DP74 79 aa14.6□□□□□ -0.07
CHRNE-202ENST00000572438 MIFP14174 115 aa14.6□□□□□ -0.07
CHRNE-202ENST00000572438 RPL39P62891 51 aaKnown RBP14.6□□□□□ -0.07
CHRNE-202ENST00000572438 SAMD5Q5TGI4 173 aa14.6□□□□□ -0.07
CHRNE-202ENST00000572438 IGHV4-28A0A0C4DH34 117 aa14.59□□□□□ -0.07
CHRNE-202ENST00000572438 DDTP30046 118 aa14.59□□□□□ -0.07
CHRNE-202ENST00000572438 C20orf203Q8NBC4 194 aa14.59□□□□□ -0.07
CHRNE-202ENST00000572438 ZMAT4Q9H898 229 aa14.59□□□□□ -0.07
CHRNE-202ENST00000572438 DKK2Q9UBU2 259 aa14.59□□□□□ -0.07
CHRNE-202ENST00000572438 PKD1L1Q8TDX9 2849 aa14.59□□□□□ -0.07
CHRNE-202ENST00000572438 ANK2Q01484 3957 aa14.59□□□□□ -0.07
CHRNE-202ENST00000572438 TRBV7-3A0A075B6L6 115 aa14.59□□□□□ -0.07
CHRNE-202ENST00000572438 TRGV4A0A0C4DH28 118 aa14.59□□□□□ -0.07
CHRNE-202ENST00000572438 TRBV6-4A0A1B0GX49 114 aa14.59□□□□□ -0.07
CHRNE-202ENST00000572438 IGIPA6NJ69 53 aa14.59□□□□□ -0.07
CHRNE-202ENST00000572438 LYRM9A8MSI8 78 aa14.59□□□□□ -0.07
CHRNE-202ENST00000572438 RPL36AP83881 106 aaKnown RBP14.59□□□□□ -0.07
CHRNE-202ENST00000572438 ZNRF2Q8NHG8 242 aa14.59□□□□□ -0.07
CHRNE-202ENST00000572438 RPL36ALQ969Q0 106 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms