RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 SMIM15Q7Z3B0 74 aa9.17□□□□□ -0.94
CCDC40-205ENST00000571028 NEGR1Q7Z3B1 354 aa9.17□□□□□ -0.94
CCDC40-205ENST00000571028 NUP35Q8NFH5 326 aa9.17□□□□□ -0.94
CCDC40-205ENST00000571028 SEC11CQ9BY50 192 aa9.17□□□□□ -0.94
CCDC40-205ENST00000571028 NAT8BQ9UHF3 227 aa9.17□□□□□ -0.94
CCDC40-205ENST00000571028 LINC00588Q9Y4M8 146 aa9.17□□□□□ -0.94
CCDC40-205ENST00000571028 NBDYA0A0U1RRE5 68 aa9.16□□□□□ -0.94
CCDC40-205ENST00000571028 A0A1B0GUT8 65 aa9.16□□□□□ -0.94
CCDC40-205ENST00000571028 RAB4BP61018 213 aa9.16□□□□□ -0.94
CCDC40-205ENST00000571028 RIGQ13278 110 aa9.16□□□□□ -0.94
CCDC40-205ENST00000571028 DPH3P1Q9H4G8 78 aa9.16□□□□□ -0.94
CCDC40-205ENST00000571028 KIF25-AS1Q9Y6Z4 181 aa9.16□□□□□ -0.94
CCDC40-205ENST00000571028 SMIM27A0A1W2PRY6 76 aa9.15□□□□□ -0.94
CCDC40-205ENST00000571028 FAM231BA6NCW3 169 aa9.15□□□□□ -0.94
CCDC40-205ENST00000571028 MRPL54Q6P161 138 aaKnown RBP9.15□□□□□ -0.94
CCDC40-205ENST00000571028 ZNRF2Q8NHG8 242 aa9.15□□□□□ -0.94
CCDC40-205ENST00000571028 ANAPC16Q96DE5 110 aa9.15□□□□□ -0.94
CCDC40-205ENST00000571028 CNFNQ9BYD5 112 aa9.15□□□□□ -0.94
CCDC40-205ENST00000571028 APOBP04114 4563 aaKnown RBP9.14□□□□□ -0.95
CCDC40-205ENST00000571028 CAMPP49913 170 aa9.14□□□□□ -0.95
CCDC40-205ENST00000571028 LINC00315P59091 139 aa9.14□□□□□ -0.95
CCDC40-205ENST00000571028 SUMO4Q6EEV6 95 aa9.14□□□□□ -0.95
CCDC40-205ENST00000571028 LYPD5Q6UWN5 251 aa9.14□□□□□ -0.95
CCDC40-205ENST00000571028 SLC7A5P1Q8MH63 180 aa9.14□□□□□ -0.95
CCDC40-205ENST00000571028 ATP6V0E2Q8NHE4 81 aa9.14□□□□□ -0.95
CCDC40-205ENST00000571028 TRAV26-2A0A0B4J265 109 aa9.13□□□□□ -0.95
CCDC40-205ENST00000571028 APOC3P02656 99 aa9.13□□□□□ -0.95
CCDC40-205ENST00000571028 RPL36AP83881 106 aaKnown RBP9.13□□□□□ -0.95
CCDC40-205ENST00000571028 RPL36ALQ969Q0 106 aaKnown RBP9.13□□□□□ -0.95
CCDC40-205ENST00000571028 SH2D6Q7Z4S9 175 aa9.12□□□□□ -0.95
CCDC40-205ENST00000571028 NEXN-AS1Q8NBZ9 246 aa9.12□□□□□ -0.95
CCDC40-205ENST00000571028 RPS10P5Q9NQ39 176 aa9.12□□□□□ -0.95
CCDC40-205ENST00000571028 CARHSP1Q9Y2V2 147 aaKnown RBP9.12□□□□□ -0.95
CCDC40-205ENST00000571028 IGHV3-38A0A0C4DH36 116 aa9.11□□□□□ -0.95
CCDC40-205ENST00000571028 C7orf77A4D0Y5 90 aa9.11□□□□□ -0.95
CCDC40-205ENST00000571028 NDUFA5Q16718 116 aa9.11□□□□□ -0.95
CCDC40-205ENST00000571028 CLRN3Q8NCR9 226 aa9.11□□□□□ -0.95
CCDC40-205ENST00000571028 MRPS16Q9Y3D3 137 aaKnown RBP9.11□□□□□ -0.95
CCDC40-205ENST00000571028 TNFRSF18Q9Y5U5 241 aa9.11□□□□□ -0.95
CCDC40-205ENST00000571028 DNAH5Q8TE73 4624 aa9.1□□□□□ -0.95
CCDC40-205ENST00000571028 TRBV7-3A0A075B6L6 115 aa9.1□□□□□ -0.95
CCDC40-205ENST00000571028 TRBV10-1A0A0K0K1A3 114 aa9.1□□□□□ -0.95
CCDC40-205ENST00000571028 H7C1H1 209 aa9.1□□□□□ -0.95
CCDC40-205ENST00000571028 M0QY20 66 aa9.1□□□□□ -0.95
CCDC40-205ENST00000571028 C10orf91Q5T1B1 145 aa9.1□□□□□ -0.95
CCDC40-205ENST00000571028 RASL11AQ6T310 242 aa9.1□□□□□ -0.95
CCDC40-205ENST00000571028 AMN1Q8IY45 258 aa9.1□□□□□ -0.95
CCDC40-205ENST00000571028 DEFB104AQ8WTQ1 72 aa9.1□□□□□ -0.95
CCDC40-205ENST00000571028 FRZBQ92765 325 aa9.1□□□□□ -0.95
CCDC40-205ENST00000571028 HBBP68871 147 aa9.09□□□□□ -0.95
CCDC40-205ENST00000571028 OR10J3Q5JRS4 329 aa9.09□□□□□ -0.95
CCDC40-205ENST00000571028 GATD1Q8NB37 220 aa9.09□□□□□ -0.95
CCDC40-205ENST00000571028 CTDSP1Q9GZU7 261 aa9.09□□□□□ -0.95
CCDC40-205ENST00000571028 TMEM191AQ9H0A3 160 aa9.09□□□□□ -0.95
CCDC40-205ENST00000571028 GTSF1LQ9H1H1 148 aa9.09□□□□□ -0.95
CCDC40-205ENST00000571028 Q9H8V8 135 aa9.09□□□□□ -0.95
CCDC40-205ENST00000571028 SMKR1H3BMG3 65 aa9.08□□□□□ -0.96
CCDC40-205ENST00000571028 LINC00694P0DN24 101 aa9.08□□□□□ -0.96
CCDC40-205ENST00000571028 KRTAP10-2P60368 255 aa9.08□□□□□ -0.96
CCDC40-205ENST00000571028 UBE2D3P61077 147 aa9.08□□□□□ -0.96
CCDC40-205ENST00000571028 UBE2D2P62837 147 aa9.08□□□□□ -0.96
CCDC40-205ENST00000571028 TTC32Q5I0X7 151 aa9.08□□□□□ -0.96
CCDC40-205ENST00000571028 RPL39LQ96EH5 51 aaKnown RBP9.08□□□□□ -0.96
CCDC40-205ENST00000571028 RNF185Q96GF1 192 aa9.08□□□□□ -0.96
CCDC40-205ENST00000571028 URGCP-MRPS24S4R325 110 aa9.08□□□□□ -0.96
CCDC40-205ENST00000571028 TRAV8-6A0A0B4J262 113 aa9.07□□□□□ -0.96
CCDC40-205ENST00000571028 A0A1B0GW15 77 aa9.07□□□□□ -0.96
CCDC40-205ENST00000571028 GAS8-AS1O95177 125 aa9.07□□□□□ -0.96
CCDC40-205ENST00000571028 NCR2O95944 276 aa9.07□□□□□ -0.96
CCDC40-205ENST00000571028 S100A8P05109 93 aa9.07□□□□□ -0.96
CCDC40-205ENST00000571028 RAB4AP20338 218 aa9.07□□□□□ -0.96
CCDC40-205ENST00000571028 S100PP25815 95 aa9.07□□□□□ -0.96
CCDC40-205ENST00000571028 RHEBQ15382 184 aa9.07□□□□□ -0.96
CCDC40-205ENST00000571028 Q5VSD8 79 aa9.07□□□□□ -0.96
CCDC40-205ENST00000571028 KCNIP4Q6PIL6 250 aa9.07□□□□□ -0.96
CCDC40-205ENST00000571028 WFDC10BQ8IUB3 73 aa9.07□□□□□ -0.96
CCDC40-205ENST00000571028 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.07□□□□□ -0.96
CCDC40-205ENST00000571028 NIT2Q9NQR4 276 aa9.07□□□□□ -0.96
CCDC40-205ENST00000571028 A0A1B0GXF2 115 aa9.06□□□□□ -0.96
CCDC40-205ENST00000571028 SIVA1O15304 175 aa9.06□□□□□ -0.96
CCDC40-205ENST00000571028 SNAPINO95295 136 aa9.06□□□□□ -0.96
CCDC40-205ENST00000571028 SVBPQ8N300 66 aa9.06□□□□□ -0.96
CCDC40-205ENST00000571028 BTF3L4Q96K17 158 aa9.06□□□□□ -0.96
CCDC40-205ENST00000571028 DNAJC30Q96LL9 226 aa9.06□□□□□ -0.96
CCDC40-205ENST00000571028 J3QL48 77 aa9.05□□□□□ -0.96
CCDC40-205ENST00000571028 LELP1Q5T871 98 aa9.05□□□□□ -0.96
CCDC40-205ENST00000571028 FAM104BQ5XKR9 115 aa9.05□□□□□ -0.96
CCDC40-205ENST00000571028 UPK3BQ9BT76 320 aa9.05□□□□□ -0.96
CCDC40-205ENST00000571028 IGHV3-30P01768 117 aa9.04□□□□□ -0.96
CCDC40-205ENST00000571028 IGHV3-33P01772 117 aa9.04□□□□□ -0.96
CCDC40-205ENST00000571028 IGHV3-30-3P0DP02 117 aa9.04□□□□□ -0.96
CCDC40-205ENST00000571028 IGHV3-30-5P0DP03 117 aa9.04□□□□□ -0.96
CCDC40-205ENST00000571028 TIRAPP58753 221 aa9.04□□□□□ -0.96
CCDC40-205ENST00000571028 MRPL51Q4U2R6 128 aaKnown RBP9.04□□□□□ -0.96
CCDC40-205ENST00000571028 ATP5L2Q7Z4Y8 100 aa9.04□□□□□ -0.96
CCDC40-205ENST00000571028 MRAP2Q96G30 205 aa9.04□□□□□ -0.96
CCDC40-205ENST00000571028 IMMP2LQ96T52 175 aa9.04□□□□□ -0.96
CCDC40-205ENST00000571028 A0A087WWC5 75 aa9.03□□□□□ -0.96
CCDC40-205ENST00000571028 BTF3P20290 206 aaKnown RBP9.03□□□□□ -0.96
CCDC40-205ENST00000571028 CKS2P33552 79 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms