RNA–Protein interactions for RNA: ENST00000570989.1

ITGA3-216, Transcript of integrin subunit alpha 3, humanhuman

Gene ITGA3, Length 2,495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-216ENST00000570989 TRBV7-1A0A0A6YYK4 115 aa10.88□□□□□ -0.67
ITGA3-216ENST00000570989 HERVK_113P61574 105 aa10.88□□□□□ -0.67
ITGA3-216ENST00000570989 RPL39P62891 51 aaKnown RBP10.88□□□□□ -0.67
ITGA3-216ENST00000570989 PMVKQ15126 192 aa10.88□□□□□ -0.67
ITGA3-216ENST00000570989 ZNRF2Q8NHG8 242 aa10.88□□□□□ -0.67
ITGA3-216ENST00000570989 FAM19A4Q96LR4 140 aa10.88□□□□□ -0.67
ITGA3-216ENST00000570989 SOCS3O14543 225 aa10.87□□□□□ -0.67
ITGA3-216ENST00000570989 NXPH4O95158 308 aa10.87□□□□□ -0.67
ITGA3-216ENST00000570989 UBE2E1P51965 193 aa10.87□□□□□ -0.67
ITGA3-216ENST00000570989 VPS13CQ709C8 3753 aa10.87□□□□□ -0.67
ITGA3-216ENST00000570989 PAPPA-AS1Q5QFB9 102 aa10.87□□□□□ -0.67
ITGA3-216ENST00000570989 PRO1854Q9UHT4 67 aa10.87□□□□□ -0.67
ITGA3-216ENST00000570989 CCDC179H3BU77 68 aa10.86□□□□□ -0.67
ITGA3-216ENST00000570989 CRIP2P52943 208 aaPredicted RBP10.86□□□□□ -0.67
ITGA3-216ENST00000570989 POLR2KP53803 58 aaKnown RBP10.86□□□□□ -0.67
ITGA3-216ENST00000570989 IGHV4OR15-8A0A075B7B6 117 aa10.86□□□□□ -0.67
ITGA3-216ENST00000570989 A0A087WW49 117 aa10.86□□□□□ -0.67
ITGA3-216ENST00000570989 PPP1R17O96001 155 aa10.86□□□□□ -0.67
ITGA3-216ENST00000570989 RNASE4P34096 147 aaKnown RBP10.86□□□□□ -0.67
ITGA3-216ENST00000570989 PIMREGQ9BSJ6 248 aa10.86□□□□□ -0.67
ITGA3-216ENST00000570989 POLQO75417 2590 aa10.86□□□□□ -0.67
ITGA3-216ENST00000570989 SAA4P35542 130 aa10.85□□□□□ -0.67
ITGA3-216ENST00000570989 GAGE2BQ13066 116 aa10.85□□□□□ -0.67
ITGA3-216ENST00000570989 GAGE2EQ4V326 116 aa10.85□□□□□ -0.67
ITGA3-216ENST00000570989 APRG1Q8IVJ8 170 aa10.85□□□□□ -0.67
ITGA3-216ENST00000570989 OR10J6PQ8NGY7 276 aa10.85□□□□□ -0.67
ITGA3-216ENST00000570989 GAGE2DQ9UEU5 116 aa10.85□□□□□ -0.67
ITGA3-216ENST00000570989 IGHV4-61A0A0C4DH41 118 aa10.85□□□□□ -0.67
ITGA3-216ENST00000570989 F6UB75 175 aa10.85□□□□□ -0.67
ITGA3-216ENST00000570989 ZNF876PQ49A33 203 aa10.85□□□□□ -0.67
ITGA3-216ENST00000570989 Q6Q795 121 aa10.85□□□□□ -0.67
ITGA3-216ENST00000570989 UNQ9165/PRO28630Q6UXU0 137 aa10.85□□□□□ -0.67
ITGA3-216ENST00000570989 TMEM170BQ5T4T1 132 aa10.84□□□□□ -0.67
ITGA3-216ENST00000570989 C10orf105Q8TEF2 133 aa10.84□□□□□ -0.67
ITGA3-216ENST00000570989 JPT2Q9H910 190 aa10.84□□□□□ -0.67
ITGA3-216ENST00000570989 CSDC2Q9Y534 153 aaKnown RBP10.84□□□□□ -0.67
ITGA3-216ENST00000570989 MAP1AP78559 2803 aaPredicted RBP10.84□□□□□ -0.67
ITGA3-216ENST00000570989 J3QQQ9 107 aa10.84□□□□□ -0.67
ITGA3-216ENST00000570989 OVOL1O14753 267 aa10.84□□□□□ -0.67
ITGA3-216ENST00000570989 SLC25A20O43772 301 aa10.84□□□□□ -0.67
ITGA3-216ENST00000570989 SCGB1C2P0DMR2 95 aa10.84□□□□□ -0.67
ITGA3-216ENST00000570989 TRPT1Q86TN4 253 aaKnown RBP10.84□□□□□ -0.67
ITGA3-216ENST00000570989 TMEM141Q96I45 108 aa10.84□□□□□ -0.67
ITGA3-216ENST00000570989 TIMM17AQ99595 171 aa10.84□□□□□ -0.67
ITGA3-216ENST00000570989 IGHV3-33P01772 117 aa10.83□□□□□ -0.68
ITGA3-216ENST00000570989 IFITM1P13164 125 aa10.83□□□□□ -0.68
ITGA3-216ENST00000570989 SUMO4Q6EEV6 95 aa10.83□□□□□ -0.68
ITGA3-216ENST00000570989 NRGNQ92686 78 aa10.83□□□□□ -0.68
ITGA3-216ENST00000570989 ZFHX3Q15911 3703 aa10.83□□□□□ -0.68
ITGA3-216ENST00000570989 C9JAW5 83 aa10.83□□□□□ -0.68
ITGA3-216ENST00000570989 TRBV12-3P01733 135 aa10.83□□□□□ -0.68
ITGA3-216ENST00000570989 TMEM263Q8WUH6 116 aaKnown RBP10.83□□□□□ -0.68
ITGA3-216ENST00000570989 ELANEP08246 267 aa10.82□□□□□ -0.68
ITGA3-216ENST00000570989 C19orf54Q5BKX5 351 aa10.82□□□□□ -0.68
ITGA3-216ENST00000570989 TTC32Q5I0X7 151 aa10.82□□□□□ -0.68
ITGA3-216ENST00000570989 PPDPFQ9H3Y8 114 aa10.82□□□□□ -0.68
ITGA3-216ENST00000570989 NPFFO15130 113 aa10.82□□□□□ -0.68
ITGA3-216ENST00000570989 C5orf56Q8N8D9 126 aa10.82□□□□□ -0.68
ITGA3-216ENST00000570989 IGHV4-30-2A0A087WSY4 118 aa10.81□□□□□ -0.68
ITGA3-216ENST00000570989 CYSRT1A8MQ03 144 aa10.81□□□□□ -0.68
ITGA3-216ENST00000570989 SNCGO76070 127 aa10.81□□□□□ -0.68
ITGA3-216ENST00000570989 NOTCH2Q04721 2471 aa10.81□□□□□ -0.68
ITGA3-216ENST00000570989 TEX15Q9BXT5 2789 aa10.81□□□□□ -0.68
ITGA3-216ENST00000570989 LINC00527Q9UJ94 153 aa10.81□□□□□ -0.68
ITGA3-216ENST00000570989 PDZD2O15018 2839 aa10.81□□□□□ -0.68
ITGA3-216ENST00000570989 NAV2Q8IVL1 2488 aa10.81□□□□□ -0.68
ITGA3-216ENST00000570989 VCYO14598 125 aa10.8□□□□□ -0.68
ITGA3-216ENST00000570989 A0A087WWL8 130 aa10.8□□□□□ -0.68
ITGA3-216ENST00000570989 SDHAF1A6NFY7 115 aa10.8□□□□□ -0.68
ITGA3-216ENST00000570989 LGALS3P17931 250 aaKnown RBP10.8□□□□□ -0.68
ITGA3-216ENST00000570989 OPRPNQ99935 248 aaPredicted RBP10.8□□□□□ -0.68
ITGA3-216ENST00000570989 TRBV27A0A0K0K1C4 114 aa10.79□□□□□ -0.68
ITGA3-216ENST00000570989 P0DMU3 169 aa10.79□□□□□ -0.68
ITGA3-216ENST00000570989 FAM231AP0DMU4 169 aa10.79□□□□□ -0.68
ITGA3-216ENST00000570989 FAM231CP0DMU5 169 aa10.79□□□□□ -0.68
ITGA3-216ENST00000570989 AKAP9Q99996 3911 aa10.79□□□□□ -0.68
ITGA3-216ENST00000570989 A0A0B4J2C4 111 aa10.79□□□□□ -0.68
ITGA3-216ENST00000570989 TMEM223A0PJW6 202 aa10.79□□□□□ -0.68
ITGA3-216ENST00000570989 CRLF1O75462 422 aa10.79□□□□□ -0.68
ITGA3-216ENST00000570989 TMEM126AQ9H061 195 aa10.79□□□□□ -0.68
ITGA3-216ENST00000570989 IGHV3OR16-10A0A075B7F0 116 aa10.78□□□□□ -0.68
ITGA3-216ENST00000570989 TRAV41A0A0B4J266 112 aa10.78□□□□□ -0.68
ITGA3-216ENST00000570989 TRAV4A0A0B4J268 109 aa10.78□□□□□ -0.68
ITGA3-216ENST00000570989 FAM223BA6NKX1 122 aa10.78□□□□□ -0.68
ITGA3-216ENST00000570989 TMEM219Q86XT9 240 aa10.78□□□□□ -0.68
ITGA3-216ENST00000570989 FAM223AQ8IWN6 122 aa10.78□□□□□ -0.68
ITGA3-216ENST00000570989 H7C2G1 150 aa10.78□□□□□ -0.68
ITGA3-216ENST00000570989 LEPROTO15243 131 aa10.78□□□□□ -0.68
ITGA3-216ENST00000570989 MUSTN1Q8IVN3 82 aa10.78□□□□□ -0.68
ITGA3-216ENST00000570989 Q8N1Y9 231 aa10.78□□□□□ -0.68
ITGA3-216ENST00000570989 NTN5Q8WTR8 489 aaPredicted RBP10.78□□□□□ -0.68
ITGA3-216ENST00000570989 TRBV6-5A0A0K0K1A5 114 aa10.77□□□□□ -0.69
ITGA3-216ENST00000570989 KLLNB2CW77 178 aa10.77□□□□□ -0.69
ITGA3-216ENST00000570989 FAM159AQ6UWV7 190 aa10.77□□□□□ -0.69
ITGA3-216ENST00000570989 LINC01600Q96MT4 127 aa10.77□□□□□ -0.69
ITGA3-216ENST00000570989 TRAV2A0A0B4J234 112 aa10.77□□□□□ -0.69
ITGA3-216ENST00000570989 LGALS9O00182 355 aa10.77□□□□□ -0.69
ITGA3-216ENST00000570989 NDUFA4O00483 81 aa10.77□□□□□ -0.69
ITGA3-216ENST00000570989 IGHV1-69P01742 117 aa10.77□□□□□ -0.69
ITGA3-216ENST00000570989 CELSR1Q9NYQ6 3014 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms