RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 IGKV2-40A0A087WW87 121 aaPredicted RBP2.6□□□□□ -1.99
NUP88-202ENST00000570937 MAP1LC3B2A6NCE7 125 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 FAM231BA6NCW3 169 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 SMLR1H3BR10 107 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 HMGB3O15347 200 aaKnown RBP2.6□□□□□ -1.99
NUP88-202ENST00000570937 IGKV2D-40P01614 121 aaPredicted RBP2.6□□□□□ -1.99
NUP88-202ENST00000570937 PPBPP02775 128 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 TCRAP04437 139 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 TPT1P13693 172 aaKnown RBP2.6□□□□□ -1.99
NUP88-202ENST00000570937 HTN3P15516 51 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 RAB5CP51148 216 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 DAZ2Q13117 558 aaKnown RBP2.6□□□□□ -1.99
NUP88-202ENST00000570937 ERCC8Q13216 396 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 PRR4Q16378 134 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 LGALS9BQ3B8N2 356 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 FAM159AQ6UWV7 190 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 TCTE3Q8IZS6 198 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 CYB561D1Q8N8Q1 229 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 C15orf53Q8NAA6 179 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 HIST1H2BAQ96A08 127 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 KCNS1Q96KK3 526 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 FAM19A4Q96LR4 140 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 ZNF471Q9BX82 626 aaPredicted RBP2.6□□□□□ -1.99
NUP88-202ENST00000570937 MAP1LC3BQ9GZQ8 125 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 NOP10Q9NPE3 64 aaKnown RBP2.6□□□□□ -1.99
NUP88-202ENST00000570937 NAGKQ9UJ70 344 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 EPDR1Q9UM22 224 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 RPH3ALQ9UNE2 315 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 RYR3Q15413 4870 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 RYR2Q92736 4967 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 TRAV21A0A0B4J279 112 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 TMEM238C9JI98 176 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 F5H768 121 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 G3V3Q6 166 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 PANO1I0J062 215 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 ZNF324O75467 553 aaPredicted RBP2.59□□□□□ -1.99
NUP88-202ENST00000570937 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 C1QBP02746 253 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 G0S2P27469 103 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 UBE2G1P62253 170 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 SLAQ13239 276 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 BTN1A1Q13410 526 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 CLLU1Q5K131 121 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 IBA57Q5T440 356 aaKnown RBP2.59□□□□□ -1.99
NUP88-202ENST00000570937 GOLT1AQ6ZVE7 132 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 UBE2DNLQ8IWF7 75 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 Q8TAT8 98 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 SFT2D1Q8WV19 159 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 TXNDC17Q9BRA2 123 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 CYTL1Q9NRR1 136 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 ZFP30Q9Y2G7 519 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 ARL2-SNX15V9GYD0 113 aa2.59□□□□□ -1.99
NUP88-202ENST00000570937 TENM2Q9NT68 2774 aa2.58□□□□□ -2
NUP88-202ENST00000570937 TRGV1A0A0A0MS02 117 aa2.58□□□□□ -2
NUP88-202ENST00000570937 A0A1B0GV90 55 aa2.58□□□□□ -2
NUP88-202ENST00000570937 FAM74A7A6NL05 159 aa2.58□□□□□ -2
NUP88-202ENST00000570937 FABP5P3A8MUU1 101 aa2.58□□□□□ -2
NUP88-202ENST00000570937 H3BNG1 76 aa2.58□□□□□ -2
NUP88-202ENST00000570937 PEX7O00628 323 aa2.58□□□□□ -2
NUP88-202ENST00000570937 IFNA1P01562 189 aa2.58□□□□□ -2
NUP88-202ENST00000570937 PRM2P04554 102 aa2.58□□□□□ -2
NUP88-202ENST00000570937 PFN1P07737 140 aaKnown RBP2.58□□□□□ -2
NUP88-202ENST00000570937 PRB4P10163 310 aaPredicted RBP2.58□□□□□ -2
NUP88-202ENST00000570937 AKR1D1P51857 326 aa2.58□□□□□ -2
NUP88-202ENST00000570937 FGF8P55075 233 aaPredicted RBP2.58□□□□□ -2
NUP88-202ENST00000570937 CCL18P55774 89 aa2.58□□□□□ -2
NUP88-202ENST00000570937 TCL1AP56279 114 aa2.58□□□□□ -2
NUP88-202ENST00000570937 UBE2G2P60604 165 aa2.58□□□□□ -2
NUP88-202ENST00000570937 RBX1P62877 108 aa2.58□□□□□ -2
NUP88-202ENST00000570937 OR5I1Q13606 314 aa2.58□□□□□ -2
NUP88-202ENST00000570937 TDRG1Q3Y452 100 aa2.58□□□□□ -2
NUP88-202ENST00000570937 Q6AWC8 147 aa2.58□□□□□ -2
NUP88-202ENST00000570937 SSX7Q7RTT5 188 aa2.58□□□□□ -2
NUP88-202ENST00000570937 PRNTQ86SH4 94 aa2.58□□□□□ -2
NUP88-202ENST00000570937 ZFAND2AQ8N6M9 145 aa2.58□□□□□ -2
NUP88-202ENST00000570937 TMEM75Q8N9X5 138 aa2.58□□□□□ -2
NUP88-202ENST00000570937 FAM213BQ8TBF2 198 aa2.58□□□□□ -2
NUP88-202ENST00000570937 MBD3L1Q8WWY6 194 aa2.58□□□□□ -2
NUP88-202ENST00000570937 FMC1Q96HJ9 113 aa2.58□□□□□ -2
NUP88-202ENST00000570937 C14orf144Q96I85 54 aa2.58□□□□□ -2
NUP88-202ENST00000570937 C18orf15Q96N68 181 aa2.58□□□□□ -2
NUP88-202ENST00000570937 APLNQ9ULZ1 77 aa2.58□□□□□ -2
NUP88-202ENST00000570937 PSG8Q9UQ74 426 aa2.58□□□□□ -2
NUP88-202ENST00000570937 KLF12Q9Y4X4 402 aa2.58□□□□□ -2
NUP88-202ENST00000570937 TRAV26-1A0A087WT03 109 aa2.57□□□□□ -2
NUP88-202ENST00000570937 TRAV8-1A0A0A6YYK1 113 aa2.57□□□□□ -2
NUP88-202ENST00000570937 TRAV1-1A0A0B4J248 108 aa2.57□□□□□ -2
NUP88-202ENST00000570937 TRGV4A0A0C4DH28 118 aa2.57□□□□□ -2
NUP88-202ENST00000570937 PLAC8L1A1L4L8 177 aa2.57□□□□□ -2
NUP88-202ENST00000570937 GGTLC3B5MD39 225 aa2.57□□□□□ -2
NUP88-202ENST00000570937 K7EP13 123 aa2.57□□□□□ -2
NUP88-202ENST00000570937 M0R2P5 195 aa2.57□□□□□ -2
NUP88-202ENST00000570937 DLEU1O43261 78 aa2.57□□□□□ -2
NUP88-202ENST00000570937 PDE6DO43924 150 aa2.57□□□□□ -2
NUP88-202ENST00000570937 ZNF861PO60384 105 aa2.57□□□□□ -2
NUP88-202ENST00000570937 SPINK4O60575 86 aa2.57□□□□□ -2
NUP88-202ENST00000570937 EIF3GO75821 320 aaKnown RBP eCLIP2.57□□□□□ -2
NUP88-202ENST00000570937 GCGP01275 180 aa2.57□□□□□ -2
NUP88-202ENST00000570937 SCGB1A1P11684 91 aa2.57□□□□□ -2
NUP88-202ENST00000570937 S100A4P26447 101 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms