RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 LGALS9O00182 355 aa11.54□□□□□ -0.56
SMG6-207ENST00000570756 UBE2E1P51965 193 aa11.54□□□□□ -0.56
SMG6-207ENST00000570756 FAM110AQ9BQ89 295 aa11.54□□□□□ -0.56
SMG6-207ENST00000570756 CSMD1Q96PZ7 3565 aa11.53□□□□□ -0.56
SMG6-207ENST00000570756 UTP20O75691 2785 aaKnown RBP11.53□□□□□ -0.56
SMG6-207ENST00000570756 A0A087WWL8 130 aa11.53□□□□□ -0.56
SMG6-207ENST00000570756 NDUFA4O00483 81 aa11.52□□□□□ -0.56
SMG6-207ENST00000570756 ELANEP08246 267 aa11.52□□□□□ -0.56
SMG6-207ENST00000570756 DEFB1P60022 68 aa11.52□□□□□ -0.56
SMG6-207ENST00000570756 RPL11P62913 178 aaKnown RBP11.52□□□□□ -0.56
SMG6-207ENST00000570756 TRIAP1O43715 76 aa11.52□□□□□ -0.57
SMG6-207ENST00000570756 ZNF22P17026 224 aaPredicted RBP11.52□□□□□ -0.57
SMG6-207ENST00000570756 C2orf82Q6UX34 121 aa11.52□□□□□ -0.57
SMG6-207ENST00000570756 BEX4Q9NWD9 120 aaPredicted RBP11.52□□□□□ -0.57
SMG6-207ENST00000570756 MDFICQ9P1T7 246 aa11.52□□□□□ -0.57
SMG6-207ENST00000570756 ZNF256Q9Y2P7 627 aaPredicted RBP11.52□□□□□ -0.57
SMG6-207ENST00000570756 F6UB75 175 aa11.51□□□□□ -0.57
SMG6-207ENST00000570756 COX6CP09669 75 aa11.51□□□□□ -0.57
SMG6-207ENST00000570756 JPT2Q9H910 190 aa11.51□□□□□ -0.57
SMG6-207ENST00000570756 ANKHD1Q8IWZ3 2542 aaKnown RBP11.51□□□□□ -0.57
SMG6-207ENST00000570756 TRAV41A0A0B4J266 112 aa11.51□□□□□ -0.57
SMG6-207ENST00000570756 H3BT86 120 aa11.51□□□□□ -0.57
SMG6-207ENST00000570756 ZFP36P26651 326 aaKnown RBP11.51□□□□□ -0.57
SMG6-207ENST00000570756 UNQ9165/PRO28630Q6UXU0 137 aa11.51□□□□□ -0.57
SMG6-207ENST00000570756 HIVEP3Q5T1R4 2406 aa11.51□□□□□ -0.57
SMG6-207ENST00000570756 A0A0J9YXY3 114 aa11.5□□□□□ -0.57
SMG6-207ENST00000570756 KLLNB2CW77 178 aa11.5□□□□□ -0.57
SMG6-207ENST00000570756 SAA4P35542 130 aa11.5□□□□□ -0.57
SMG6-207ENST00000570756 C5orf56Q8N8D9 126 aa11.5□□□□□ -0.57
SMG6-207ENST00000570756 IGHV3-64A0A075B6Q5 118 aa11.5□□□□□ -0.57
SMG6-207ENST00000570756 FAM240AA0A1B0GVK7 77 aa11.5□□□□□ -0.57
SMG6-207ENST00000570756 PRB1P04280 392 aa11.5□□□□□ -0.57
SMG6-207ENST00000570756 CFAP161Q6P656 301 aa11.5□□□□□ -0.57
SMG6-207ENST00000570756 FAM208BQ5VWN6 2430 aa11.5□□□□□ -0.57
SMG6-207ENST00000570756 FAM74A4Q5TZK3 123 aa11.49□□□□□ -0.57
SMG6-207ENST00000570756 ICOSQ9Y6W8 199 aa11.49□□□□□ -0.57
SMG6-207ENST00000570756 SPTBN1Q01082 2364 aaKnown RBP11.49□□□□□ -0.57
SMG6-207ENST00000570756 BBC3Q96PG8 261 aaPredicted RBP11.49□□□□□ -0.57
SMG6-207ENST00000570756 OPRPNQ99935 248 aaPredicted RBP11.49□□□□□ -0.57
SMG6-207ENST00000570756 SPTAN1Q13813 2472 aaKnown RBP11.49□□□□□ -0.57
SMG6-207ENST00000570756 KLRB1Q12918 225 aa11.48□□□□□ -0.57
SMG6-207ENST00000570756 ZNF56Q15929 161 aa11.48□□□□□ -0.57
SMG6-207ENST00000570756 SMIM20Q8N5G0 67 aa11.48□□□□□ -0.57
SMG6-207ENST00000570756 FBXL19-AS1Q494R0 122 aa11.48□□□□□ -0.57
SMG6-207ENST00000570756 C20orf203Q8NBC4 194 aa11.48□□□□□ -0.57
SMG6-207ENST00000570756 A0A0J9YXV3 536 aa11.47□□□□□ -0.57
SMG6-207ENST00000570756 H7C423 109 aa11.47□□□□□ -0.57
SMG6-207ENST00000570756 TIMM21Q9BVV7 248 aa11.47□□□□□ -0.57
SMG6-207ENST00000570756 LRBAP50851 2863 aa11.47□□□□□ -0.57
SMG6-207ENST00000570756 M0QY20 66 aa11.47□□□□□ -0.57
SMG6-207ENST00000570756 GRNP28799 593 aaKnown RBP11.47□□□□□ -0.57
SMG6-207ENST00000570756 C11orf71Q6IPW1 123 aa11.47□□□□□ -0.57
SMG6-207ENST00000570756 DCHS2Q6V1P9 2916 aa11.47□□□□□ -0.57
SMG6-207ENST00000570756 PRSS2P07478 247 aa11.46□□□□□ -0.57
SMG6-207ENST00000570756 IGHV3-30-3P0DP02 117 aa11.46□□□□□ -0.57
SMG6-207ENST00000570756 HERV-K104P63124 156 aa11.46□□□□□ -0.57
SMG6-207ENST00000570756 C19orf54Q5BKX5 351 aa11.46□□□□□ -0.57
SMG6-207ENST00000570756 USP9XQ93008 2570 aaPredicted RBP11.46□□□□□ -0.58
SMG6-207ENST00000570756 IGKV3-7A0A075B6H7 116 aa11.46□□□□□ -0.58
SMG6-207ENST00000570756 MEIG1Q5JSS6 88 aa11.46□□□□□ -0.58
SMG6-207ENST00000570756 SPANXDQ9BXN6 97 aa11.46□□□□□ -0.58
SMG6-207ENST00000570756 SPANXCQ9NY87 97 aa11.46□□□□□ -0.58
SMG6-207ENST00000570756 MOB4Q9Y3A3 225 aa11.46□□□□□ -0.58
SMG6-207ENST00000570756 IGLV4-3A0A075B6K6 122 aa11.45□□□□□ -0.58
SMG6-207ENST00000570756 I3L3M4 83 aa11.45□□□□□ -0.58
SMG6-207ENST00000570756 TRBV12-3P01733 135 aa11.45□□□□□ -0.58
SMG6-207ENST00000570756 LITAFQ99732 161 aa11.45□□□□□ -0.58
SMG6-207ENST00000570756 ID1P41134 155 aa11.44□□□□□ -0.58
SMG6-207ENST00000570756 DEFB121Q5J5C9 76 aa11.44□□□□□ -0.58
SMG6-207ENST00000570756 C9orf85Q96MD7 179 aa11.44□□□□□ -0.58
SMG6-207ENST00000570756 RHPN1-AS1Q9BWJ2 59 aa11.44□□□□□ -0.58
SMG6-207ENST00000570756 LINC00527Q9UJ94 153 aa11.44□□□□□ -0.58
SMG6-207ENST00000570756 TRAV12-3A0A0B4J271 114 aa11.44□□□□□ -0.58
SMG6-207ENST00000570756 NPFFO15130 113 aa11.44□□□□□ -0.58
SMG6-207ENST00000570756 USMG5Q96IX5 58 aa11.44□□□□□ -0.58
SMG6-207ENST00000570756 SPXQ9BT56 116 aa11.44□□□□□ -0.58
SMG6-207ENST00000570756 CRYBG3Q68DQ2 2970 aa11.43□□□□□ -0.58
SMG6-207ENST00000570756 IGHV3-16A0A0C4DH30 117 aa11.43□□□□□ -0.58
SMG6-207ENST00000570756 TRBV7-7A0A0K0K1E9 115 aa11.43□□□□□ -0.58
SMG6-207ENST00000570756 LST1O00453 97 aa11.43□□□□□ -0.58
SMG6-207ENST00000570756 MIAQ16674 131 aa11.43□□□□□ -0.58
SMG6-207ENST00000570756 SHISA2Q6UWI4 295 aa11.43□□□□□ -0.58
SMG6-207ENST00000570756 TMEM219Q86XT9 240 aa11.43□□□□□ -0.58
SMG6-207ENST00000570756 YAE1D1Q9NRH1 226 aa11.43□□□□□ -0.58
SMG6-207ENST00000570756 ZNF580Q9UK33 172 aa11.43□□□□□ -0.58
SMG6-207ENST00000570756 LRRK2Q5S007 2527 aa11.42□□□□□ -0.58
SMG6-207ENST00000570756 TMEM126AQ9H061 195 aa11.42□□□□□ -0.58
SMG6-207ENST00000570756 CENPEQ02224 2701 aa11.41□□□□□ -0.58
SMG6-207ENST00000570756 ADARB2-AS1A8MUL3 147 aa11.41□□□□□ -0.58
SMG6-207ENST00000570756 MRPS36P82909 103 aaKnown RBP11.41□□□□□ -0.58
SMG6-207ENST00000570756 TMEM101Q96IK0 257 aa11.41□□□□□ -0.58
SMG6-207ENST00000570756 NDUFA12Q9UI09 145 aa11.41□□□□□ -0.58
SMG6-207ENST00000570756 PYGO1Q9Y3Y4 419 aa11.41□□□□□ -0.58
SMG6-207ENST00000570756 TENM4Q6N022 2769 aa11.41□□□□□ -0.58
SMG6-207ENST00000570756 IGHV1-58A0A0C4DH39 117 aa11.41□□□□□ -0.58
SMG6-207ENST00000570756 CD28P10747 220 aa11.41□□□□□ -0.58
SMG6-207ENST00000570756 DAZ1Q9NQZ3 744 aaKnown RBP11.41□□□□□ -0.58
SMG6-207ENST00000570756 H3BUA1 57 aa11.4□□□□□ -0.58
SMG6-207ENST00000570756 TRGV11A0A075B6L2 103 aa11.4□□□□□ -0.58
SMG6-207ENST00000570756 CLEC2BQ92478 149 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms