RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 SPANXN1Q5VSR9 72 aa5.56□□□□□ -1.52
CTDNEP1-203ENST00000570385 NTM-AS1Q6ZSK4 140 aa5.56□□□□□ -1.52
CTDNEP1-203ENST00000570385 BAGE2Q86Y30 109 aa5.56□□□□□ -1.52
CTDNEP1-203ENST00000570385 FAM213BQ8TBF2 198 aa5.56□□□□□ -1.52
CTDNEP1-203ENST00000570385 SFT2D1Q8WV19 159 aa5.56□□□□□ -1.52
CTDNEP1-203ENST00000570385 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.56□□□□□ -1.52
CTDNEP1-203ENST00000570385 FAT3Q8TDW7 4589 aa5.55□□□□□ -1.52
CTDNEP1-203ENST00000570385 IGLV10-54A0A075B6I4 117 aa5.55□□□□□ -1.52
CTDNEP1-203ENST00000570385 PANO1I0J062 215 aa5.55□□□□□ -1.52
CTDNEP1-203ENST00000570385 OXTP01178 125 aa5.55□□□□□ -1.52
CTDNEP1-203ENST00000570385 RBX1P62877 108 aa5.55□□□□□ -1.52
CTDNEP1-203ENST00000570385 LINC00269Q8N2A0 174 aa5.55□□□□□ -1.52
CTDNEP1-203ENST00000570385 DAZAP1Q96EP5 407 aaKnown RBP5.55□□□□□ -1.52
CTDNEP1-203ENST00000570385 DERL1Q9BUN8 251 aa5.55□□□□□ -1.52
CTDNEP1-203ENST00000570385 SNAI2O43623 268 aa5.54□□□□□ -1.52
CTDNEP1-203ENST00000570385 MGPP08493 103 aa5.54□□□□□ -1.52
CTDNEP1-203ENST00000570385 GZMBP10144 247 aa5.54□□□□□ -1.52
CTDNEP1-203ENST00000570385 RAB5CP51148 216 aa5.54□□□□□ -1.52
CTDNEP1-203ENST00000570385 MIAQ16674 131 aa5.54□□□□□ -1.52
CTDNEP1-203ENST00000570385 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.54□□□□□ -1.52
CTDNEP1-203ENST00000570385 TCEAL7Q9BRU2 100 aa5.54□□□□□ -1.52
CTDNEP1-203ENST00000570385 TPPP3Q9BW30 176 aa5.54□□□□□ -1.52
CTDNEP1-203ENST00000570385 PLA2G2DQ9UNK4 145 aa5.54□□□□□ -1.52
CTDNEP1-203ENST00000570385 HMCN2Q8NDA2 5059 aa5.53□□□□□ -1.52
CTDNEP1-203ENST00000570385 TRBV25-1A0A075B6N4 114 aa5.53□□□□□ -1.52
CTDNEP1-203ENST00000570385 PFDN1O60925 122 aa5.53□□□□□ -1.52
CTDNEP1-203ENST00000570385 OR5AL1P0C617 328 aa5.53□□□□□ -1.52
CTDNEP1-203ENST00000570385 SMIM17P0DL12 118 aa5.53□□□□□ -1.52
CTDNEP1-203ENST00000570385 KRTAP26-1Q6PEX3 210 aa5.53□□□□□ -1.52
CTDNEP1-203ENST00000570385 TMUB2Q71RG4 321 aa5.53□□□□□ -1.52
CTDNEP1-203ENST00000570385 C9orf163Q8N9P6 203 aa5.53□□□□□ -1.52
CTDNEP1-203ENST00000570385 MBD3L1Q8WWY6 194 aa5.53□□□□□ -1.52
CTDNEP1-203ENST00000570385 MLST8Q9BVC4 326 aa5.53□□□□□ -1.52
CTDNEP1-203ENST00000570385 SSBP4Q9BWG4 385 aaPredicted RBP5.53□□□□□ -1.52
CTDNEP1-203ENST00000570385 KIF25-AS1Q9Y6Z4 181 aa5.53□□□□□ -1.52
CTDNEP1-203ENST00000570385 UBR4Q5T4S7 5183 aa5.53□□□□□ -1.52
CTDNEP1-203ENST00000570385 S100A9P06702 114 aaKnown RBP5.52□□□□□ -1.53
CTDNEP1-203ENST00000570385 DGAT2L7PQ6IED9 249 aa5.52□□□□□ -1.53
CTDNEP1-203ENST00000570385 SDIM1Q6ZPB5 146 aa5.52□□□□□ -1.53
CTDNEP1-203ENST00000570385 KCNRGQ8N5I3 272 aa5.52□□□□□ -1.53
CTDNEP1-203ENST00000570385 DPH3Q96FX2 82 aa5.52□□□□□ -1.53
CTDNEP1-203ENST00000570385 AP1S3Q96PC3 154 aa5.52□□□□□ -1.53
CTDNEP1-203ENST00000570385 PRR34Q9NV39 138 aa5.52□□□□□ -1.53
CTDNEP1-203ENST00000570385 VAX2Q9UIW0 290 aa5.52□□□□□ -1.53
CTDNEP1-203ENST00000570385 IGLV4-60A0A075B6I1 120 aa5.51□□□□□ -1.53
CTDNEP1-203ENST00000570385 IGHV1-24A0A0C4DH33 117 aa5.51□□□□□ -1.53
CTDNEP1-203ENST00000570385 hDV102S1A0JD36 115 aa5.51□□□□□ -1.53
CTDNEP1-203ENST00000570385 M0QY20 66 aa5.51□□□□□ -1.53
CTDNEP1-203ENST00000570385 CXCL1P09341 107 aa5.51□□□□□ -1.53
CTDNEP1-203ENST00000570385 H2AFB1P0C5Y9 115 aa5.51□□□□□ -1.53
CTDNEP1-203ENST00000570385 CHTF8P0CG12 524 aa5.51□□□□□ -1.53
CTDNEP1-203ENST00000570385 RPL35P42766 123 aaKnown RBP5.51□□□□□ -1.53
CTDNEP1-203ENST00000570385 NKX2-5P52952 324 aaPredicted RBP5.51□□□□□ -1.53
CTDNEP1-203ENST00000570385 PKIAP61925 76 aa5.51□□□□□ -1.53
CTDNEP1-203ENST00000570385 CCL20P78556 96 aa5.51□□□□□ -1.53
CTDNEP1-203ENST00000570385 REG3AQ06141 175 aa5.51□□□□□ -1.53
CTDNEP1-203ENST00000570385 TMEM97Q5BJF2 176 aa5.51□□□□□ -1.53
CTDNEP1-203ENST00000570385 SUMO4Q6EEV6 95 aa5.51□□□□□ -1.53
CTDNEP1-203ENST00000570385 OR2D3Q8NGH3 330 aa5.51□□□□□ -1.53
CTDNEP1-203ENST00000570385 GFRA4Q9GZZ7 299 aa5.51□□□□□ -1.53
CTDNEP1-203ENST00000570385 BATF3Q9NR55 127 aa5.51□□□□□ -1.53
CTDNEP1-203ENST00000570385 RAB19A4D1S5 217 aa5.5□□□□□ -1.53
CTDNEP1-203ENST00000570385 UMAD1C9J7I0 102 aa5.5□□□□□ -1.53
CTDNEP1-203ENST00000570385 SLPIP03973 132 aa5.5□□□□□ -1.53
CTDNEP1-203ENST00000570385 IQCJQ1A5X6 159 aa5.5□□□□□ -1.53
CTDNEP1-203ENST00000570385 CENPWQ5EE01 88 aa5.5□□□□□ -1.53
CTDNEP1-203ENST00000570385 FER1L6-AS1Q8NA97 138 aa5.5□□□□□ -1.53
CTDNEP1-203ENST00000570385 C20orf203Q8NBC4 194 aa5.5□□□□□ -1.53
CTDNEP1-203ENST00000570385 GNG13Q9P2W3 67 aa5.5□□□□□ -1.53
CTDNEP1-203ENST00000570385 PKHD1L1Q86WI1 4243 aa5.5□□□□□ -1.53
CTDNEP1-203ENST00000570385 IGKV3OR2-268A0A0C4DH90 116 aa5.49□□□□□ -1.53
CTDNEP1-203ENST00000570385 IGLC6P0CF74 106 aa5.49□□□□□ -1.53
CTDNEP1-203ENST00000570385 RGS21Q2M5E4 152 aa5.49□□□□□ -1.53
CTDNEP1-203ENST00000570385 TMEM243Q9BU79 118 aa5.49□□□□□ -1.53
CTDNEP1-203ENST00000570385 A0A087WYN8 130 aa5.48□□□□□ -1.53
CTDNEP1-203ENST00000570385 A0A0D9SG52 128 aa5.48□□□□□ -1.53
CTDNEP1-203ENST00000570385 KANTRA0A1W2PQU2 76 aa5.48□□□□□ -1.53
CTDNEP1-203ENST00000570385 H7C1H1 209 aa5.48□□□□□ -1.53
CTDNEP1-203ENST00000570385 BCL2L11O43521 198 aa5.48□□□□□ -1.53
CTDNEP1-203ENST00000570385 MT1HL1P0DM35 61 aa5.48□□□□□ -1.53
CTDNEP1-203ENST00000570385 ZNF345Q14585 488 aa5.48□□□□□ -1.53
CTDNEP1-203ENST00000570385 RASL11AQ6T310 242 aa5.48□□□□□ -1.53
CTDNEP1-203ENST00000570385 CLRN3Q8NCR9 226 aa5.48□□□□□ -1.53
CTDNEP1-203ENST00000570385 AP5S1Q9NUS5 200 aa5.48□□□□□ -1.53
CTDNEP1-203ENST00000570385 IGHV3-64A0A075B6Q5 118 aa5.47□□□□□ -1.53
CTDNEP1-203ENST00000570385 UBE2L6O14933 153 aa5.47□□□□□ -1.53
CTDNEP1-203ENST00000570385 NTF3P20783 257 aa5.47□□□□□ -1.53
CTDNEP1-203ENST00000570385 AMTP48728 403 aa5.47□□□□□ -1.53
CTDNEP1-203ENST00000570385 SULT1A2P50226 295 aa5.47□□□□□ -1.53
CTDNEP1-203ENST00000570385 CNBPP62633 177 aaKnown RBP5.47□□□□□ -1.53
CTDNEP1-203ENST00000570385 CACNG7P62955 275 aa5.47□□□□□ -1.53
CTDNEP1-203ENST00000570385 HIGD2BQ4VC39 106 aa5.47□□□□□ -1.53
CTDNEP1-203ENST00000570385 LYZL1Q6UWQ5 148 aa5.47□□□□□ -1.53
CTDNEP1-203ENST00000570385 C11orf52Q96A22 123 aa5.47□□□□□ -1.53
CTDNEP1-203ENST00000570385 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.46□□□□□ -1.54
CTDNEP1-203ENST00000570385 TRAV8-4A0A0B4J246 113 aa5.46□□□□□ -1.54
CTDNEP1-203ENST00000570385 TRAV26-2A0A0B4J265 109 aa5.46□□□□□ -1.54
CTDNEP1-203ENST00000570385 A0A1B0GUV1 79 aa5.46□□□□□ -1.54
CTDNEP1-203ENST00000570385 C19orf71A6NCJ1 209 aa5.46□□□□□ -1.54
CTDNEP1-203ENST00000570385 GAGE12HA6NDE8 117 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms