RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 BLOC1S1P78537 153 aa7.96□□□□□ -1.14
SNX29-207ENST00000568949 CIRBPQ14011 172 aaKnown RBP7.96□□□□□ -1.14
SNX29-207ENST00000568949 C9orf62Q8N4C0 152 aa7.96□□□□□ -1.14
SNX29-207ENST00000568949 IGKV3D-20A0A0C4DH25 116 aa7.95□□□□□ -1.14
SNX29-207ENST00000568949 TRBV10-1A0A0K0K1A3 114 aa7.95□□□□□ -1.14
SNX29-207ENST00000568949 TMEM262E9PQX1 116 aa7.95□□□□□ -1.14
SNX29-207ENST00000568949 PDE6DO43924 150 aa7.95□□□□□ -1.14
SNX29-207ENST00000568949 AKR1C3P42330 323 aa7.95□□□□□ -1.14
SNX29-207ENST00000568949 DPH3P1Q9H4G8 78 aa7.95□□□□□ -1.14
SNX29-207ENST00000568949 IL36BQ9NZH7 164 aa7.95□□□□□ -1.14
SNX29-207ENST00000568949 HLA-DQA1P01909 254 aa7.94□□□□□ -1.14
SNX29-207ENST00000568949 RPL36AP83881 106 aaKnown RBP7.94□□□□□ -1.14
SNX29-207ENST00000568949 MIAQ16674 131 aa7.94□□□□□ -1.14
SNX29-207ENST00000568949 COX8CQ7Z4L0 72 aa7.94□□□□□ -1.14
SNX29-207ENST00000568949 C15orf54Q8N8G6 183 aa7.94□□□□□ -1.14
SNX29-207ENST00000568949 RPL36ALQ969Q0 106 aaKnown RBP7.94□□□□□ -1.14
SNX29-207ENST00000568949 RNF185Q96GF1 192 aa7.94□□□□□ -1.14
SNX29-207ENST00000568949 LINC01600Q96MT4 127 aa7.94□□□□□ -1.14
SNX29-207ENST00000568949 GNG13Q9P2W3 67 aa7.94□□□□□ -1.14
SNX29-207ENST00000568949 UBE2D3P61077 147 aa7.93□□□□□ -1.14
SNX29-207ENST00000568949 UBE2D2P62837 147 aa7.93□□□□□ -1.14
SNX29-207ENST00000568949 C21orf62-AS1Q17RA5 79 aa7.93□□□□□ -1.14
SNX29-207ENST00000568949 FAM162BQ5T6X4 162 aa7.93□□□□□ -1.14
SNX29-207ENST00000568949 Q86TA4 180 aa7.93□□□□□ -1.14
SNX29-207ENST00000568949 SMIM12Q96EX1 92 aa7.93□□□□□ -1.14
SNX29-207ENST00000568949 BIN3Q9NQY0 253 aa7.93□□□□□ -1.14
SNX29-207ENST00000568949 TRBV7-3A0A075B6L6 115 aa7.92□□□□□ -1.14
SNX29-207ENST00000568949 TRBV6-8A0A0A6YYG3 113 aa7.92□□□□□ -1.14
SNX29-207ENST00000568949 A0A1B0GV50 99 aa7.92□□□□□ -1.14
SNX29-207ENST00000568949 LTAP01374 205 aa7.92□□□□□ -1.14
SNX29-207ENST00000568949 ANGP03950 147 aaKnown RBP7.92□□□□□ -1.14
SNX29-207ENST00000568949 PKIAP61925 76 aa7.92□□□□□ -1.14
SNX29-207ENST00000568949 MEF2BQ02080 365 aaPredicted RBP7.92□□□□□ -1.14
SNX29-207ENST00000568949 MPV17L2Q567V2 206 aa7.92□□□□□ -1.14
SNX29-207ENST00000568949 DNLZQ5SXM8 178 aa7.92□□□□□ -1.14
SNX29-207ENST00000568949 FAM74A4Q5TZK3 123 aa7.92□□□□□ -1.14
SNX29-207ENST00000568949 CLRN3Q8NCR9 226 aa7.92□□□□□ -1.14
SNX29-207ENST00000568949 SFRP2Q96HF1 295 aa7.92□□□□□ -1.14
SNX29-207ENST00000568949 VAX2Q9UIW0 290 aa7.92□□□□□ -1.14
SNX29-207ENST00000568949 TRAV34A0A0B4J273 112 aa7.91□□□□□ -1.14
SNX29-207ENST00000568949 H3BVH4 76 aa7.91□□□□□ -1.14
SNX29-207ENST00000568949 CNBPP62633 177 aaKnown RBP7.91□□□□□ -1.14
SNX29-207ENST00000568949 KRTAP26-1Q6PEX3 210 aa7.91□□□□□ -1.14
SNX29-207ENST00000568949 OR10G8Q8NGN5 311 aa7.91□□□□□ -1.14
SNX29-207ENST00000568949 PRR34Q9NV39 138 aa7.91□□□□□ -1.14
SNX29-207ENST00000568949 A0A087WWL8 130 aa7.9□□□□□ -1.14
SNX29-207ENST00000568949 A0A087WYN8 130 aa7.9□□□□□ -1.14
SNX29-207ENST00000568949 TMEM238LA0A1B0GVL6 79 aa7.9□□□□□ -1.14
SNX29-207ENST00000568949 B4DEV8 164 aa7.9□□□□□ -1.14
SNX29-207ENST00000568949 ARMS2P0C7Q2 107 aa7.9□□□□□ -1.14
SNX29-207ENST00000568949 BAGE2Q86Y30 109 aa7.9□□□□□ -1.14
SNX29-207ENST00000568949 SVIPQ8NHG7 77 aa7.9□□□□□ -1.14
SNX29-207ENST00000568949 C11orf52Q96A22 123 aa7.9□□□□□ -1.14
SNX29-207ENST00000568949 DPH3Q96FX2 82 aa7.9□□□□□ -1.14
SNX29-207ENST00000568949 IGHV3-64A0A075B6Q5 118 aa7.89□□□□□ -1.15
SNX29-207ENST00000568949 A0A1B0GVG6 124 aa7.89□□□□□ -1.15
SNX29-207ENST00000568949 GAS8-AS1O95177 125 aa7.89□□□□□ -1.15
SNX29-207ENST00000568949 BCL2P10415 239 aa7.89□□□□□ -1.15
SNX29-207ENST00000568949 ZNF674Q2M3X9 581 aa7.89□□□□□ -1.15
SNX29-207ENST00000568949 ALKAL2Q6UX46 152 aa7.89□□□□□ -1.15
SNX29-207ENST00000568949 A0A0J9YXV3 536 aa7.88□□□□□ -1.15
SNX29-207ENST00000568949 SCO2A0A1W2PP80 73 aa7.88□□□□□ -1.15
SNX29-207ENST00000568949 PHOX2AO14813 284 aa7.88□□□□□ -1.15
SNX29-207ENST00000568949 NDUFS6O75380 124 aaKnown RBP7.88□□□□□ -1.15
SNX29-207ENST00000568949 RPL35P42766 123 aaKnown RBP7.88□□□□□ -1.15
SNX29-207ENST00000568949 CCL20P78556 96 aa7.88□□□□□ -1.15
SNX29-207ENST00000568949 SPACA4Q8TDM5 124 aa7.88□□□□□ -1.15
SNX29-207ENST00000568949 C7orf33Q8WU49 177 aa7.88□□□□□ -1.15
SNX29-207ENST00000568949 CHCHD5Q9BSY4 110 aa7.88□□□□□ -1.15
SNX29-207ENST00000568949 PLAC8Q9NZF1 115 aa7.88□□□□□ -1.15
SNX29-207ENST00000568949 PHLDA3Q9Y5J5 127 aa7.88□□□□□ -1.15
SNX29-207ENST00000568949 XKRY2A2RUG3 117 aa7.87□□□□□ -1.15
SNX29-207ENST00000568949 KRBOX1C9JBD0 128 aa7.87□□□□□ -1.15
SNX29-207ENST00000568949 SH2D1AO60880 128 aa7.87□□□□□ -1.15
SNX29-207ENST00000568949 CXCL1P09341 107 aa7.87□□□□□ -1.15
SNX29-207ENST00000568949 GNG4P50150 75 aa7.87□□□□□ -1.15
SNX29-207ENST00000568949 WDR73Q6P4I2 378 aa7.87□□□□□ -1.15
SNX29-207ENST00000568949 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.87□□□□□ -1.15
SNX29-207ENST00000568949 MED9Q9NWA0 146 aa7.87□□□□□ -1.15
SNX29-207ENST00000568949 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.86□□□□□ -1.15
SNX29-207ENST00000568949 hDV102S1A0JD36 115 aa7.86□□□□□ -1.15
SNX29-207ENST00000568949 TMEM250H0YL14 139 aa7.86□□□□□ -1.15
SNX29-207ENST00000568949 M0R381 172 aa7.86□□□□□ -1.15
SNX29-207ENST00000568949 CHTF8P0CG12 524 aa7.86□□□□□ -1.15
SNX29-207ENST00000568949 KRTAP10-8P60410 259 aa7.86□□□□□ -1.15
SNX29-207ENST00000568949 ODF1Q14990 250 aa7.86□□□□□ -1.15
SNX29-207ENST00000568949 TMEM97Q5BJF2 176 aa7.86□□□□□ -1.15
SNX29-207ENST00000568949 ZFP82Q8N141 532 aa7.86□□□□□ -1.15
SNX29-207ENST00000568949 NEXN-AS1Q8NBZ9 246 aa7.86□□□□□ -1.15
SNX29-207ENST00000568949 LYPD6BQ8NI32 183 aa7.86□□□□□ -1.15
SNX29-207ENST00000568949 MLST8Q9BVC4 326 aa7.86□□□□□ -1.15
SNX29-207ENST00000568949 AP5S1Q9NUS5 200 aa7.86□□□□□ -1.15
SNX29-207ENST00000568949 KIF25-AS1Q9Y6Z4 181 aa7.86□□□□□ -1.15
SNX29-207ENST00000568949 GRIFINA4D1Z8 144 aa7.85□□□□□ -1.15
SNX29-207ENST00000568949 CRIP1P50238 77 aa7.85□□□□□ -1.15
SNX29-207ENST00000568949 NKX2-5P52952 324 aaPredicted RBP7.85□□□□□ -1.15
SNX29-207ENST00000568949 RPS20P60866 119 aaKnown RBP7.85□□□□□ -1.15
SNX29-207ENST00000568949 RAB4BP61018 213 aa7.85□□□□□ -1.15
SNX29-207ENST00000568949 RBX1P62877 108 aa7.85□□□□□ -1.15
SNX29-207ENST00000568949 PRR27Q6MZM9 219 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms