RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 Q8N814 137 aa19.53■□□□□ 0.72
RAB40C-211ENST00000568586 URGCP-MRPS24S4R325 110 aa19.53■□□□□ 0.72
RAB40C-211ENST00000568586 F5H697 171 aa19.52■□□□□ 0.72
RAB40C-211ENST00000568586 SSTP61278 116 aa19.52■□□□□ 0.72
RAB40C-211ENST00000568586 NUDT10Q8NFP7 164 aa19.52■□□□□ 0.72
RAB40C-211ENST00000568586 NUDT11Q96G61 164 aa19.52■□□□□ 0.72
RAB40C-211ENST00000568586 TMEM250H0YL14 139 aa19.51■□□□□ 0.71
RAB40C-211ENST00000568586 WDR73Q6P4I2 378 aa19.51■□□□□ 0.71
RAB40C-211ENST00000568586 COX11Q9Y6N1 276 aa19.51■□□□□ 0.71
RAB40C-211ENST00000568586 GCSHP23434 173 aa19.5■□□□□ 0.71
RAB40C-211ENST00000568586 XGP55808 180 aa19.5■□□□□ 0.71
RAB40C-211ENST00000568586 OCC1Q8TAD7 63 aa19.5■□□□□ 0.71
RAB40C-211ENST00000568586 TPPP3Q9BW30 176 aa19.5■□□□□ 0.71
RAB40C-211ENST00000568586 ELOBQ15370 118 aa19.49■□□□□ 0.71
RAB40C-211ENST00000568586 A0A087WX48 190 aa19.48■□□□□ 0.71
RAB40C-211ENST00000568586 K7EN84 100 aa19.48■□□□□ 0.71
RAB40C-211ENST00000568586 M0QY20 66 aa19.48■□□□□ 0.71
RAB40C-211ENST00000568586 CTRLP40313 264 aa19.48■□□□□ 0.71
RAB40C-211ENST00000568586 LYZL1Q6UWQ5 148 aa19.48■□□□□ 0.71
RAB40C-211ENST00000568586 CNFNQ9BYD5 112 aa19.48■□□□□ 0.71
RAB40C-211ENST00000568586 IGLV5-52A0A0A0MRZ9 124 aa19.47■□□□□ 0.71
RAB40C-211ENST00000568586 TMEM97Q5BJF2 176 aa19.47■□□□□ 0.71
RAB40C-211ENST00000568586 ATRAIDQ6UW56 229 aa19.47■□□□□ 0.71
RAB40C-211ENST00000568586 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-211ENST00000568586 KLK12Q9UKR0 248 aa19.47■□□□□ 0.71
RAB40C-211ENST00000568586 NDUFS6O75380 124 aaKnown RBP19.46■□□□□ 0.71
RAB40C-211ENST00000568586 RMI2Q96E14 147 aa19.46■□□□□ 0.71
RAB40C-211ENST00000568586 DNAJC30Q96LL9 226 aa19.46■□□□□ 0.71
RAB40C-211ENST00000568586 DNAH8Q96JB1 4490 aa19.46■□□□□ 0.71
RAB40C-211ENST00000568586 A0A1B0GVG6 124 aa19.45■□□□□ 0.7
RAB40C-211ENST00000568586 WFDC2Q14508 124 aa19.45■□□□□ 0.7
RAB40C-211ENST00000568586 NTM-AS1Q6ZSK4 140 aa19.45■□□□□ 0.7
RAB40C-211ENST00000568586 RPP21Q9H633 154 aaKnown RBP19.45■□□□□ 0.7
RAB40C-211ENST00000568586 FAT1Q14517 4588 aa19.45■□□□□ 0.7
RAB40C-211ENST00000568586 H7C1H1 209 aa19.44■□□□□ 0.7
RAB40C-211ENST00000568586 TRGC1P0CF51 173 aa19.44■□□□□ 0.7
RAB40C-211ENST00000568586 NTF3P20783 257 aa19.44■□□□□ 0.7
RAB40C-211ENST00000568586 KCNIP4Q6PIL6 250 aa19.44■□□□□ 0.7
RAB40C-211ENST00000568586 RNASE7Q9H1E1 156 aaKnown RBP19.44■□□□□ 0.7
RAB40C-211ENST00000568586 NKX2-5P52952 324 aaPredicted RBP19.43■□□□□ 0.7
RAB40C-211ENST00000568586 SUMO4Q6EEV6 95 aa19.43■□□□□ 0.7
RAB40C-211ENST00000568586 PKIAP61925 76 aa19.42■□□□□ 0.7
RAB40C-211ENST00000568586 MGPP08493 103 aa19.41■□□□□ 0.7
RAB40C-211ENST00000568586 Q0VG73 95 aa19.41■□□□□ 0.7
RAB40C-211ENST00000568586 UBE2WQ96B02 151 aa19.41■□□□□ 0.7
RAB40C-211ENST00000568586 TMEM262E9PQX1 116 aa19.4■□□□□ 0.7
RAB40C-211ENST00000568586 FAM231DQ6ZW35 169 aa19.4■□□□□ 0.7
RAB40C-211ENST00000568586 DPH3P1Q9H4G8 78 aa19.4■□□□□ 0.7
RAB40C-211ENST00000568586 MPV17L2Q567V2 206 aa19.39■□□□□ 0.69
RAB40C-211ENST00000568586 TMEM70Q9BUB7 260 aa19.39■□□□□ 0.69
RAB40C-211ENST00000568586 IQCJQ1A5X6 159 aa19.38■□□□□ 0.69
RAB40C-211ENST00000568586 RASL11AQ6T310 242 aa19.38■□□□□ 0.69
RAB40C-211ENST00000568586 ENHOQ6UWT2 76 aa19.38■□□□□ 0.69
RAB40C-211ENST00000568586 GTSF1Q8WW33 167 aa19.38■□□□□ 0.69
RAB40C-211ENST00000568586 CHCHD5Q9BSY4 110 aa19.38■□□□□ 0.69
RAB40C-211ENST00000568586 IGKV2D-24A0A075B6R9 120 aa19.37■□□□□ 0.69
RAB40C-211ENST00000568586 BAALCQ8WXS3 180 aa19.37■□□□□ 0.69
RAB40C-211ENST00000568586 FAM210AQ96ND0 272 aa19.36■□□□□ 0.69
RAB40C-211ENST00000568586 NIT2Q9NQR4 276 aa19.36■□□□□ 0.69
RAB40C-211ENST00000568586 TRBV25-1A0A075B6N4 114 aa19.35■□□□□ 0.69
RAB40C-211ENST00000568586 LECT2O14960 151 aa19.34■□□□□ 0.69
RAB40C-211ENST00000568586 TWIST1Q15672 202 aa19.34■□□□□ 0.69
RAB40C-211ENST00000568586 Q8N976 141 aa19.34■□□□□ 0.69
RAB40C-211ENST00000568586 FRZBQ92765 325 aa19.34■□□□□ 0.69
RAB40C-211ENST00000568586 VPS13BQ7Z7G8 4022 aa19.34■□□□□ 0.69
RAB40C-211ENST00000568586 FOXA3P55318 350 aaPredicted RBP19.33■□□□□ 0.68
RAB40C-211ENST00000568586 CT83Q5H943 113 aa19.33■□□□□ 0.68
RAB40C-211ENST00000568586 C15orf54Q8N8G6 183 aa19.33■□□□□ 0.68
RAB40C-211ENST00000568586 EIF5A2Q9GZV4 153 aaKnown RBP19.33■□□□□ 0.68
RAB40C-211ENST00000568586 PRR34Q9NV39 138 aa19.33■□□□□ 0.68
RAB40C-211ENST00000568586 IGHV1-24A0A0C4DH33 117 aa19.32■□□□□ 0.68
RAB40C-211ENST00000568586 GATCO43716 136 aaKnown RBP19.32■□□□□ 0.68
RAB40C-211ENST00000568586 RBX1P62877 108 aa19.32■□□□□ 0.68
RAB40C-211ENST00000568586 PGLYRP4Q96LB8 373 aa19.32■□□□□ 0.68
RAB40C-211ENST00000568586 A8MWL6 223 aa19.31■□□□□ 0.68
RAB40C-211ENST00000568586 ANGP03950 147 aaKnown RBP19.31■□□□□ 0.68
RAB40C-211ENST00000568586 EPM2AB3EWF7 344 aa19.3■□□□□ 0.68
RAB40C-211ENST00000568586 MIAQ16674 131 aa19.3■□□□□ 0.68
RAB40C-211ENST00000568586 SMIM7Q9BQ49 75 aa19.3■□□□□ 0.68
RAB40C-211ENST00000568586 C1orf43Q9BWL3 253 aa19.3■□□□□ 0.68
RAB40C-211ENST00000568586 CRPP02741 224 aa19.29■□□□□ 0.68
RAB40C-211ENST00000568586 SRP19P09132 144 aaKnown RBP19.29■□□□□ 0.68
RAB40C-211ENST00000568586 GAGE6Q13070 117 aa19.29■□□□□ 0.68
RAB40C-211ENST00000568586 LINC01551Q86U37 167 aa19.29■□□□□ 0.68
RAB40C-211ENST00000568586 CEBPGP53567 150 aa19.28■□□□□ 0.68
RAB40C-211ENST00000568586 GATD1Q8NB37 220 aa19.28■□□□□ 0.68
RAB40C-211ENST00000568586 FAM30AQ9NZY2 134 aa19.28■□□□□ 0.68
RAB40C-211ENST00000568586 Q6ZSA8 131 aa19.27■□□□□ 0.68
RAB40C-211ENST00000568586 A0A1B0GUV1 79 aa19.26■□□□□ 0.67
RAB40C-211ENST00000568586 IGLV2-33A0A075B6J2 118 aaPredicted RBP19.25■□□□□ 0.67
RAB40C-211ENST00000568586 SRRM2Q9UQ35 2752 aaKnown RBP19.24■□□□□ 0.67
RAB40C-211ENST00000568586 ZNF727A8MUV8 499 aa19.24■□□□□ 0.67
RAB40C-211ENST00000568586 KRTAP26-1Q6PEX3 210 aa19.24■□□□□ 0.67
RAB40C-211ENST00000568586 SMIM15Q7Z3B0 74 aa19.24■□□□□ 0.67
RAB40C-211ENST00000568586 TMEM243Q9BU79 118 aa19.24■□□□□ 0.67
RAB40C-211ENST00000568586 GFRA4Q9GZZ7 299 aa19.24■□□□□ 0.67
RAB40C-211ENST00000568586 OSTCQ9NRP0 149 aa19.24■□□□□ 0.67
RAB40C-211ENST00000568586 FAM231BA6NCW3 169 aa19.23■□□□□ 0.67
RAB40C-211ENST00000568586 TEX261Q6UWH6 196 aa19.23■□□□□ 0.67
RAB40C-211ENST00000568586 LINC00269Q8N2A0 174 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms