RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 ZNF580Q9UK33 172 aa15□□□□□ -0.01
AC009041.2-204ENST00000568394 CHD6Q8TD26 2715 aa14.99□□□□□ -0.01
AC009041.2-204ENST00000568394 LY6LH3BQJ8 138 aa14.99□□□□□ -0.01
AC009041.2-204ENST00000568394 KLRB1Q12918 225 aa14.99□□□□□ -0.01
AC009041.2-204ENST00000568394 DUX5Q96PT3 197 aa14.99□□□□□ -0.01
AC009041.2-204ENST00000568394 NHLRC4P0CG21 123 aaPredicted RBP14.99□□□□□ -0.01
AC009041.2-204ENST00000568394 MXRA5Q9NR99 2828 aa14.99□□□□□ -0.01
AC009041.2-204ENST00000568394 CRYGDP07320 174 aa14.99□□□□□ -0.01
AC009041.2-204ENST00000568394 C20orf173Q96LM9 149 aa14.99□□□□□ -0.01
AC009041.2-204ENST00000568394 CHCHD5Q9BSY4 110 aa14.99□□□□□ -0.01
AC009041.2-204ENST00000568394 SDHAF1A6NFY7 115 aa14.98□□□□□ -0.01
AC009041.2-204ENST00000568394 RPL32P62910 135 aaKnown RBP14.98□□□□□ -0.01
AC009041.2-204ENST00000568394 RBAKDNA6NC62 111 aa14.98□□□□□ -0.01
AC009041.2-204ENST00000568394 ATXN8Q156A1 80 aa14.98□□□□□ -0.01
AC009041.2-204ENST00000568394 ZNRF2Q8NHG8 242 aa14.98□□□□□ -0.01
AC009041.2-204ENST00000568394 TMEM190Q8WZ59 177 aa14.98□□□□□ -0.01
AC009041.2-204ENST00000568394 COX6B1P14854 86 aa14.97□□□□□ -0.01
AC009041.2-204ENST00000568394 LINC01620Q4KN68 170 aa14.97□□□□□ -0.01
AC009041.2-204ENST00000568394 Q6ZSV7 163 aa14.97□□□□□ -0.01
AC009041.2-204ENST00000568394 RHODO00212 210 aa14.97□□□□□ -0.01
AC009041.2-204ENST00000568394 SRSF2Q01130 221 aaKnown RBP14.97□□□□□ -0.01
AC009041.2-204ENST00000568394 H3BMM0 161 aa14.97□□□□□ -0.01
AC009041.2-204ENST00000568394 SLC25A29Q8N8R3 303 aa14.97□□□□□ -0.01
AC009041.2-204ENST00000568394 NPBQ8NG41 125 aa14.97□□□□□ -0.01
AC009041.2-204ENST00000568394 UBE2WQ96B02 151 aa14.97□□□□□ -0.01
AC009041.2-204ENST00000568394 EEF1AKMT3Q96AZ1 226 aa14.96□□□□□ -0.01
AC009041.2-204ENST00000568394 IGLV4-69A0A075B6H9 119 aa14.95□□□□□ -0.02
AC009041.2-204ENST00000568394 TRAV8-3A0A0A6YYJ7 113 aa14.95□□□□□ -0.02
AC009041.2-204ENST00000568394 IGHV3-73A0A0B4J1V6 119 aa14.95□□□□□ -0.02
AC009041.2-204ENST00000568394 TMEM95Q3KNT9 176 aa14.95□□□□□ -0.02
AC009041.2-204ENST00000568394 CLEC2BQ92478 149 aa14.95□□□□□ -0.02
AC009041.2-204ENST00000568394 ZFAND3Q9H8U3 227 aa14.95□□□□□ -0.02
AC009041.2-204ENST00000568394 TSHBP01222 138 aa14.95□□□□□ -0.02
AC009041.2-204ENST00000568394 PAPPA-AS1Q5QFB9 102 aa14.95□□□□□ -0.02
AC009041.2-204ENST00000568394 IGHV3-33P01772 117 aa14.95□□□□□ -0.02
AC009041.2-204ENST00000568394 A0A0J9YXV3 536 aa14.94□□□□□ -0.02
AC009041.2-204ENST00000568394 CFAP161Q6P656 301 aa14.94□□□□□ -0.02
AC009041.2-204ENST00000568394 IGF2-ASQ6U949 168 aa14.94□□□□□ -0.02
AC009041.2-204ENST00000568394 CCDC140Q96MF4 163 aa14.94□□□□□ -0.02
AC009041.2-204ENST00000568394 LINC01619G3V211 115 aa14.93□□□□□ -0.02
AC009041.2-204ENST00000568394 CLPSL1A2RUU4 121 aa14.93□□□□□ -0.02
AC009041.2-204ENST00000568394 SUMO4Q6EEV6 95 aa14.93□□□□□ -0.02
AC009041.2-204ENST00000568394 DAND5Q8N907 189 aa14.93□□□□□ -0.02
AC009041.2-204ENST00000568394 VCYO14598 125 aa14.92□□□□□ -0.02
AC009041.2-204ENST00000568394 PSMG3-AS1Q96PY0 264 aa14.92□□□□□ -0.02
AC009041.2-204ENST00000568394 FLNAP21333 2647 aaKnown RBP14.91□□□□□ -0.02
AC009041.2-204ENST00000568394 C9orf47Q6ZRZ4 202 aa14.91□□□□□ -0.02
AC009041.2-204ENST00000568394 CITED1Q99966 193 aa14.91□□□□□ -0.02
AC009041.2-204ENST00000568394 FLNBO75369 2602 aaKnown RBP14.91□□□□□ -0.02
AC009041.2-204ENST00000568394 TRBV12-3P01733 135 aa14.91□□□□□ -0.02
AC009041.2-204ENST00000568394 SAA4P35542 130 aa14.91□□□□□ -0.02
AC009041.2-204ENST00000568394 UNQ9165/PRO28630Q6UXU0 137 aa14.91□□□□□ -0.02
AC009041.2-204ENST00000568394 Q8N9W7 124 aa14.91□□□□□ -0.02
AC009041.2-204ENST00000568394 TRAV12-2A0A075B6T6 113 aa14.91□□□□□ -0.02
AC009041.2-204ENST00000568394 HELZ2Q9BYK8 2649 aaKnown RBP14.9□□□□□ -0.02
AC009041.2-204ENST00000568394 A8MZ25 164 aa14.9□□□□□ -0.02
AC009041.2-204ENST00000568394 TRIAP1O43715 76 aa14.9□□□□□ -0.02
AC009041.2-204ENST00000568394 COX6CP09669 75 aa14.9□□□□□ -0.02
AC009041.2-204ENST00000568394 ZFAND2AQ8N6M9 145 aa14.89□□□□□ -0.03
AC009041.2-204ENST00000568394 CEMP1Q6PRD7 247 aaPredicted RBP14.89□□□□□ -0.03
AC009041.2-204ENST00000568394 ZNF625Q96I27 306 aaPredicted RBP14.88□□□□□ -0.03
AC009041.2-204ENST00000568394 UBE2E1P51965 193 aa14.88□□□□□ -0.03
AC009041.2-204ENST00000568394 GPHB5Q86YW7 130 aa14.88□□□□□ -0.03
AC009041.2-204ENST00000568394 FAM110DQ8TAY7 271 aaPredicted RBP14.88□□□□□ -0.03
AC009041.2-204ENST00000568394 PPP1R17O96001 155 aa14.87□□□□□ -0.03
AC009041.2-204ENST00000568394 RPL13AP40429 203 aaKnown RBP14.87□□□□□ -0.03
AC009041.2-204ENST00000568394 RS1O15537 224 aa14.87□□□□□ -0.03
AC009041.2-204ENST00000568394 ZNF876PQ49A33 203 aa14.87□□□□□ -0.03
AC009041.2-204ENST00000568394 C9orf139Q6ZV77 190 aa14.87□□□□□ -0.03
AC009041.2-204ENST00000568394 RNASE3P12724 160 aaKnown RBP14.86□□□□□ -0.03
AC009041.2-204ENST00000568394 TMEM263Q8WUH6 116 aaKnown RBP14.86□□□□□ -0.03
AC009041.2-204ENST00000568394 IGIPA6NJ69 53 aa14.86□□□□□ -0.03
AC009041.2-204ENST00000568394 M0R2P5 195 aa14.86□□□□□ -0.03
AC009041.2-204ENST00000568394 PF4V1P10720 104 aa14.86□□□□□ -0.03
AC009041.2-204ENST00000568394 ODF3Q96PU9 254 aa14.86□□□□□ -0.03
AC009041.2-204ENST00000568394 ITPR2Q14571 2701 aa14.86□□□□□ -0.03
AC009041.2-204ENST00000568394 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.86□□□□□ -0.03
AC009041.2-204ENST00000568394 KLK9Q9UKQ9 250 aa14.86□□□□□ -0.03
AC009041.2-204ENST00000568394 ITPR3Q14573 2671 aa14.85□□□□□ -0.03
AC009041.2-204ENST00000568394 IGHV4-4A0A075B6R2 117 aa14.84□□□□□ -0.03
AC009041.2-204ENST00000568394 CD28P10747 220 aa14.84□□□□□ -0.03
AC009041.2-204ENST00000568394 EIF4EBP3O60516 100 aaPredicted RBP14.84□□□□□ -0.03
AC009041.2-204ENST00000568394 TRBV10-2A0A0K0K1G8 114 aa14.84□□□□□ -0.03
AC009041.2-204ENST00000568394 FAM236AA0A1B0GUQ0 79 aa14.84□□□□□ -0.03
AC009041.2-204ENST00000568394 FAM236BA0A1B0GV22 79 aa14.84□□□□□ -0.03
AC009041.2-204ENST00000568394 MUC4Q99102 2169 aa14.84□□□□□ -0.03
AC009041.2-204ENST00000568394 RNF223E7ERA6 249 aa14.83□□□□□ -0.04
AC009041.2-204ENST00000568394 ZNF22P17026 224 aaPredicted RBP14.83□□□□□ -0.04
AC009041.2-204ENST00000568394 MRPL23Q16540 153 aaKnown RBP14.83□□□□□ -0.04
AC009041.2-204ENST00000568394 TMEM141Q96I45 108 aa14.83□□□□□ -0.04
AC009041.2-204ENST00000568394 TIMM21Q9BVV7 248 aa14.83□□□□□ -0.04
AC009041.2-204ENST00000568394 ATP5J2P56134 94 aa14.83□□□□□ -0.04
AC009041.2-204ENST00000568394 OVOL1O14753 267 aa14.82□□□□□ -0.04
AC009041.2-204ENST00000568394 SBSPONQ8IVN8 264 aa14.82□□□□□ -0.04
AC009041.2-204ENST00000568394 ICOSQ9Y6W8 199 aa14.82□□□□□ -0.04
AC009041.2-204ENST00000568394 KNCNA6PVL3 124 aa14.81□□□□□ -0.04
AC009041.2-204ENST00000568394 LEPROTO15243 131 aa14.81□□□□□ -0.04
AC009041.2-204ENST00000568394 A0A0J9YXY3 114 aa14.81□□□□□ -0.04
AC009041.2-204ENST00000568394 MDFICQ9P1T7 246 aa14.81□□□□□ -0.04
AC009041.2-204ENST00000568394 IGHV1-69DA0A0B4J2H0 117 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms