RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 Q6ZRN7 208 aaPredicted RBP8.79□□□□□ -1
TSC2-220ENST00000568238 NUP35Q8NFH5 326 aa8.79□□□□□ -1
TSC2-220ENST00000568238 PRADC1Q9BSG0 188 aa8.79□□□□□ -1
TSC2-220ENST00000568238 TRBV6-4A0A1B0GX49 114 aa8.78□□□□□ -1
TSC2-220ENST00000568238 SMIM27A0A1W2PRY6 76 aa8.78□□□□□ -1
TSC2-220ENST00000568238 F5H697 171 aa8.78□□□□□ -1
TSC2-220ENST00000568238 EVI2AP22794 236 aa8.78□□□□□ -1
TSC2-220ENST00000568238 FOXA3P55318 350 aaPredicted RBP8.78□□□□□ -1
TSC2-220ENST00000568238 KRTAP10-2P60368 255 aa8.78□□□□□ -1
TSC2-220ENST00000568238 NAT8BQ9UHF3 227 aa8.78□□□□□ -1
TSC2-220ENST00000568238 KIF25-AS1Q9Y6Z4 181 aa8.78□□□□□ -1
TSC2-220ENST00000568238 A0A1B0GUT8 65 aa8.77□□□□□ -1.01
TSC2-220ENST00000568238 CARHSP1Q9Y2V2 147 aaKnown RBP8.77□□□□□ -1.01
TSC2-220ENST00000568238 TRAV9-2A0A087WT02 112 aa8.76□□□□□ -1.01
TSC2-220ENST00000568238 GAGE12JA6NER3 117 aa8.76□□□□□ -1.01
TSC2-220ENST00000568238 RAB4BP61018 213 aa8.76□□□□□ -1.01
TSC2-220ENST00000568238 GAGE1Q13065 139 aa8.76□□□□□ -1.01
TSC2-220ENST00000568238 GAGE4Q13068 117 aa8.76□□□□□ -1.01
TSC2-220ENST00000568238 GAGE5Q13069 117 aa8.76□□□□□ -1.01
TSC2-220ENST00000568238 GAGE13Q4V321 117 aa8.76□□□□□ -1.01
TSC2-220ENST00000568238 C10orf91Q5T1B1 145 aa8.76□□□□□ -1.01
TSC2-220ENST00000568238 SMIM15Q7Z3B0 74 aa8.76□□□□□ -1.01
TSC2-220ENST00000568238 NFE4Q86UQ8 179 aa8.76□□□□□ -1.01
TSC2-220ENST00000568238 WFDC10BQ8IUB3 73 aa8.76□□□□□ -1.01
TSC2-220ENST00000568238 SLC7A5P1Q8MH63 180 aa8.76□□□□□ -1.01
TSC2-220ENST00000568238 MAPKAPK5-AS1Q8N8E1 139 aa8.76□□□□□ -1.01
TSC2-220ENST00000568238 ANAPC16Q96DE5 110 aa8.76□□□□□ -1.01
TSC2-220ENST00000568238 KRTAP4-5Q9BYR2 181 aa8.76□□□□□ -1.01
TSC2-220ENST00000568238 DPH3P1Q9H4G8 78 aa8.76□□□□□ -1.01
TSC2-220ENST00000568238 Q9UF83 564 aa8.76□□□□□ -1.01
TSC2-220ENST00000568238 K7EP13 123 aa8.75□□□□□ -1.01
TSC2-220ENST00000568238 EREGO14944 169 aa8.75□□□□□ -1.01
TSC2-220ENST00000568238 RIGQ13278 110 aa8.75□□□□□ -1.01
TSC2-220ENST00000568238 SUMO4Q6EEV6 95 aa8.75□□□□□ -1.01
TSC2-220ENST00000568238 SH2D6Q7Z4S9 175 aa8.75□□□□□ -1.01
TSC2-220ENST00000568238 APOC3P02656 99 aa8.74□□□□□ -1.01
TSC2-220ENST00000568238 DNAH10OSP0CZ25 163 aa8.74□□□□□ -1.01
TSC2-220ENST00000568238 MRPL54Q6P161 138 aaKnown RBP8.74□□□□□ -1.01
TSC2-220ENST00000568238 CLRN3Q8NCR9 226 aa8.74□□□□□ -1.01
TSC2-220ENST00000568238 TRAV26-2A0A0B4J265 109 aa8.73□□□□□ -1.01
TSC2-220ENST00000568238 CAMPP49913 170 aa8.73□□□□□ -1.01
TSC2-220ENST00000568238 NDUFA5Q16718 116 aa8.73□□□□□ -1.01
TSC2-220ENST00000568238 TNFRSF18Q9Y5U5 241 aa8.73□□□□□ -1.01
TSC2-220ENST00000568238 VPS13BQ7Z7G8 4022 aa8.72□□□□□ -1.01
TSC2-220ENST00000568238 TRBV10-1A0A0K0K1A3 114 aa8.72□□□□□ -1.01
TSC2-220ENST00000568238 C7orf77A4D0Y5 90 aa8.72□□□□□ -1.01
TSC2-220ENST00000568238 TIRAPP58753 221 aa8.72□□□□□ -1.01
TSC2-220ENST00000568238 C10orf126Q8N4M7 172 aa8.72□□□□□ -1.01
TSC2-220ENST00000568238 CTDSP1Q9GZU7 261 aa8.72□□□□□ -1.01
TSC2-220ENST00000568238 M0QY20 66 aa8.71□□□□□ -1.02
TSC2-220ENST00000568238 LINC00694P0DN24 101 aa8.71□□□□□ -1.02
TSC2-220ENST00000568238 HBBP68871 147 aa8.71□□□□□ -1.02
TSC2-220ENST00000568238 RPL36AP83881 106 aaKnown RBP8.71□□□□□ -1.02
TSC2-220ENST00000568238 RHEBQ15382 184 aa8.71□□□□□ -1.02
TSC2-220ENST00000568238 CDPF1Q6NVV7 123 aa8.71□□□□□ -1.02
TSC2-220ENST00000568238 NEXN-AS1Q8NBZ9 246 aa8.71□□□□□ -1.02
TSC2-220ENST00000568238 ATP6V0E2Q8NHE4 81 aa8.71□□□□□ -1.02
TSC2-220ENST00000568238 RPL36ALQ969Q0 106 aaKnown RBP8.71□□□□□ -1.02
TSC2-220ENST00000568238 TMEM191AQ9H0A3 160 aa8.71□□□□□ -1.02
TSC2-220ENST00000568238 RPS10P5Q9NQ39 176 aa8.71□□□□□ -1.02
TSC2-220ENST00000568238 A0A087WTM6 91 aa8.7□□□□□ -1.02
TSC2-220ENST00000568238 A0A1B0GW15 77 aa8.7□□□□□ -1.02
TSC2-220ENST00000568238 A0A1B0GXF2 115 aa8.7□□□□□ -1.02
TSC2-220ENST00000568238 H7C1H1 209 aa8.7□□□□□ -1.02
TSC2-220ENST00000568238 AMN1Q8IY45 258 aa8.7□□□□□ -1.02
TSC2-220ENST00000568238 Q8N1X5 172 aa8.7□□□□□ -1.02
TSC2-220ENST00000568238 SVBPQ8N300 66 aa8.7□□□□□ -1.02
TSC2-220ENST00000568238 GATD1Q8NB37 220 aa8.7□□□□□ -1.02
TSC2-220ENST00000568238 PGPEP1Q9NXJ5 209 aa8.7□□□□□ -1.02
TSC2-220ENST00000568238 TRBV7-3A0A075B6L6 115 aa8.69□□□□□ -1.02
TSC2-220ENST00000568238 A0A087WWC5 75 aa8.69□□□□□ -1.02
TSC2-220ENST00000568238 IGHV3-38A0A0C4DH36 116 aa8.69□□□□□ -1.02
TSC2-220ENST00000568238 SNAPINO95295 136 aa8.69□□□□□ -1.02
TSC2-220ENST00000568238 S100A8P05109 93 aa8.69□□□□□ -1.02
TSC2-220ENST00000568238 FUSP35637 526 aaKnown RBP eCLIP8.69□□□□□ -1.02
TSC2-220ENST00000568238 UBE2D3P61077 147 aa8.69□□□□□ -1.02
TSC2-220ENST00000568238 UBE2D2P62837 147 aa8.69□□□□□ -1.02
TSC2-220ENST00000568238 LINC01556Q5JQF7 62 aa8.69□□□□□ -1.02
TSC2-220ENST00000568238 KCNIP4Q6PIL6 250 aa8.69□□□□□ -1.02
TSC2-220ENST00000568238 RASL11AQ6T310 242 aa8.69□□□□□ -1.02
TSC2-220ENST00000568238 ATP5L2Q7Z4Y8 100 aa8.69□□□□□ -1.02
TSC2-220ENST00000568238 RNF185Q96GF1 192 aa8.69□□□□□ -1.02
TSC2-220ENST00000568238 IMMP2LQ96T52 175 aa8.69□□□□□ -1.02
TSC2-220ENST00000568238 URGCP-MRPS24S4R325 110 aa8.69□□□□□ -1.02
TSC2-220ENST00000568238 FAT1Q14517 4588 aa8.69□□□□□ -1.02
TSC2-220ENST00000568238 TRAV8-6A0A0B4J262 113 aa8.68□□□□□ -1.02
TSC2-220ENST00000568238 NCR2O95944 276 aa8.68□□□□□ -1.02
TSC2-220ENST00000568238 RAB4AP20338 218 aa8.68□□□□□ -1.02
TSC2-220ENST00000568238 OR10J3Q5JRS4 329 aa8.68□□□□□ -1.02
TSC2-220ENST00000568238 RPL39LQ96EH5 51 aaKnown RBP8.68□□□□□ -1.02
TSC2-220ENST00000568238 BTF3L4Q96K17 158 aa8.68□□□□□ -1.02
TSC2-220ENST00000568238 GTSF1LQ9H1H1 148 aa8.68□□□□□ -1.02
TSC2-220ENST00000568238 SMKR1H3BMG3 65 aa8.67□□□□□ -1.02
TSC2-220ENST00000568238 S100PP25815 95 aa8.67□□□□□ -1.02
TSC2-220ENST00000568238 NIT2Q9NQR4 276 aa8.67□□□□□ -1.02
TSC2-220ENST00000568238 DNAH8Q96JB1 4490 aa8.66□□□□□ -1.02
TSC2-220ENST00000568238 GAS8-AS1O95177 125 aa8.66□□□□□ -1.02
TSC2-220ENST00000568238 LELP1Q5T871 98 aa8.66□□□□□ -1.02
TSC2-220ENST00000568238 FAM104BQ5XKR9 115 aa8.66□□□□□ -1.02
TSC2-220ENST00000568238 MRAP2Q96G30 205 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms