RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 TRGC1P0CF51 173 aa8.82□□□□□ -1
CNOT1-213ENST00000568158 DNAH10OSP0CZ25 163 aa8.82□□□□□ -1
CNOT1-213ENST00000568158 UBE2D3P61077 147 aa8.82□□□□□ -1
CNOT1-213ENST00000568158 UBE2D2P62837 147 aa8.82□□□□□ -1
CNOT1-213ENST00000568158 TNP2Q05952 138 aa8.82□□□□□ -1
CNOT1-213ENST00000568158 CT83Q5H943 113 aa8.82□□□□□ -1
CNOT1-213ENST00000568158 OR10G8Q8NGN5 311 aa8.82□□□□□ -1
CNOT1-213ENST00000568158 TSKUQ8WUA8 353 aa8.82□□□□□ -1
CNOT1-213ENST00000568158 CNFNQ9BYD5 112 aa8.82□□□□□ -1
CNOT1-213ENST00000568158 DPH3P1Q9H4G8 78 aa8.82□□□□□ -1
CNOT1-213ENST00000568158 TRAV9-2A0A087WT02 112 aa8.81□□□□□ -1
CNOT1-213ENST00000568158 M0QY20 66 aa8.81□□□□□ -1
CNOT1-213ENST00000568158 IGHV3-30P01768 117 aa8.81□□□□□ -1
CNOT1-213ENST00000568158 IGHV3-33P01772 117 aa8.81□□□□□ -1
CNOT1-213ENST00000568158 IGHV3-30-3P0DP02 117 aa8.81□□□□□ -1
CNOT1-213ENST00000568158 IGHV3-30-5P0DP03 117 aa8.81□□□□□ -1
CNOT1-213ENST00000568158 SUMO4Q6EEV6 95 aa8.81□□□□□ -1
CNOT1-213ENST00000568158 C15orf54Q8N8G6 183 aa8.81□□□□□ -1
CNOT1-213ENST00000568158 KRTAP9-2Q9BYQ4 174 aa8.81□□□□□ -1
CNOT1-213ENST00000568158 FAT2Q9NYQ8 4349 aa8.8□□□□□ -1
CNOT1-213ENST00000568158 A0A1B0GVY2 172 aa8.8□□□□□ -1
CNOT1-213ENST00000568158 HIGD1CA8MV81 97 aa8.8□□□□□ -1
CNOT1-213ENST00000568158 Q8N3U1 123 aa8.8□□□□□ -1
CNOT1-213ENST00000568158 A0A087WWC5 75 aa8.79□□□□□ -1
CNOT1-213ENST00000568158 LINC01556Q5JQF7 62 aa8.79□□□□□ -1
CNOT1-213ENST00000568158 NUP35Q8NFH5 326 aa8.79□□□□□ -1
CNOT1-213ENST00000568158 GFRA4Q9GZZ7 299 aa8.79□□□□□ -1
CNOT1-213ENST00000568158 A0A1B0GUT8 65 aa8.78□□□□□ -1
CNOT1-213ENST00000568158 FAM231BA6NCW3 169 aa8.78□□□□□ -1
CNOT1-213ENST00000568158 RASL11AQ6T310 242 aa8.78□□□□□ -1
CNOT1-213ENST00000568158 GATD1Q8NB37 220 aa8.78□□□□□ -1
CNOT1-213ENST00000568158 BIRC6Q9NR09 4857 aa8.77□□□□□ -1.01
CNOT1-213ENST00000568158 TRAV26-2A0A0B4J265 109 aa8.77□□□□□ -1.01
CNOT1-213ENST00000568158 H7C1H1 209 aa8.77□□□□□ -1.01
CNOT1-213ENST00000568158 Q6ZRN7 208 aaPredicted RBP8.77□□□□□ -1.01
CNOT1-213ENST00000568158 NTM-AS1Q6ZSK4 140 aa8.77□□□□□ -1.01
CNOT1-213ENST00000568158 SMIM15Q7Z3B0 74 aa8.77□□□□□ -1.01
CNOT1-213ENST00000568158 DEFB104AQ8WTQ1 72 aa8.77□□□□□ -1.01
CNOT1-213ENST00000568158 BORCS7Q96B45 105 aa8.77□□□□□ -1.01
CNOT1-213ENST00000568158 DNAJC30Q96LL9 226 aa8.77□□□□□ -1.01
CNOT1-213ENST00000568158 NIT2Q9NQR4 276 aa8.77□□□□□ -1.01
CNOT1-213ENST00000568158 KRTAP9-6A0A140TA67 174 aa8.76□□□□□ -1.01
CNOT1-213ENST00000568158 SMIM27A0A1W2PRY6 76 aa8.76□□□□□ -1.01
CNOT1-213ENST00000568158 IBA57-AS1B1ANH7 110 aa8.76□□□□□ -1.01
CNOT1-213ENST00000568158 K7EP13 123 aa8.76□□□□□ -1.01
CNOT1-213ENST00000568158 BTF3P20290 206 aaKnown RBP8.76□□□□□ -1.01
CNOT1-213ENST00000568158 DAZ4Q86SG3 579 aaKnown RBP8.76□□□□□ -1.01
CNOT1-213ENST00000568158 NIT1Q86X76 327 aa8.76□□□□□ -1.01
CNOT1-213ENST00000568158 DAZ3Q9NR90 486 aaKnown RBP8.76□□□□□ -1.01
CNOT1-213ENST00000568158 TRBV6-8A0A0A6YYG3 113 aa8.75□□□□□ -1.01
CNOT1-213ENST00000568158 RIGQ13278 110 aa8.75□□□□□ -1.01
CNOT1-213ENST00000568158 C10orf126Q8N4M7 172 aa8.75□□□□□ -1.01
CNOT1-213ENST00000568158 RPL39LQ96EH5 51 aaKnown RBP8.75□□□□□ -1.01
CNOT1-213ENST00000568158 NAT8BQ9UHF3 227 aa8.75□□□□□ -1.01
CNOT1-213ENST00000568158 PKD1P98161 4303 aa8.75□□□□□ -1.01
CNOT1-213ENST00000568158 TMEM262E9PQX1 116 aa8.74□□□□□ -1.01
CNOT1-213ENST00000568158 GAS8-AS1O95177 125 aa8.74□□□□□ -1.01
CNOT1-213ENST00000568158 RAB4AP20338 218 aa8.74□□□□□ -1.01
CNOT1-213ENST00000568158 NFE4Q86UQ8 179 aa8.74□□□□□ -1.01
CNOT1-213ENST00000568158 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.74□□□□□ -1.01
CNOT1-213ENST00000568158 RNF185Q96GF1 192 aa8.74□□□□□ -1.01
CNOT1-213ENST00000568158 TMEM191AQ9H0A3 160 aa8.74□□□□□ -1.01
CNOT1-213ENST00000568158 Q9HAA7 133 aa8.74□□□□□ -1.01
CNOT1-213ENST00000568158 DNAH11Q96DT5 4516 aa8.73□□□□□ -1.01
CNOT1-213ENST00000568158 TMEM218A2RU14 115 aa8.72□□□□□ -1.01
CNOT1-213ENST00000568158 TMEM97Q5BJF2 176 aa8.72□□□□□ -1.01
CNOT1-213ENST00000568158 UQCC3Q6UW78 93 aa8.72□□□□□ -1.01
CNOT1-213ENST00000568158 AMN1Q8IY45 258 aa8.72□□□□□ -1.01
CNOT1-213ENST00000568158 CHCHD5Q9BSY4 110 aa8.72□□□□□ -1.01
CNOT1-213ENST00000568158 KLK12Q9UKR0 248 aa8.72□□□□□ -1.01
CNOT1-213ENST00000568158 URGCP-MRPS24S4R325 110 aa8.72□□□□□ -1.01
CNOT1-213ENST00000568158 A0A087WX48 190 aa8.71□□□□□ -1.02
CNOT1-213ENST00000568158 ADCYAP1P18509 176 aa8.71□□□□□ -1.02
CNOT1-213ENST00000568158 CAMPP49913 170 aa8.71□□□□□ -1.02
CNOT1-213ENST00000568158 PNRC1Q12796 327 aaPredicted RBP8.71□□□□□ -1.02
CNOT1-213ENST00000568158 GAGE6Q13070 117 aa8.71□□□□□ -1.02
CNOT1-213ENST00000568158 ATRAIDQ6UW56 229 aa8.71□□□□□ -1.02
CNOT1-213ENST00000568158 COMMD7Q86VX2 200 aa8.71□□□□□ -1.02
CNOT1-213ENST00000568158 FRZBQ92765 325 aa8.71□□□□□ -1.02
CNOT1-213ENST00000568158 HECTD4Q9Y4D8 3996 aa8.7□□□□□ -1.02
CNOT1-213ENST00000568158 TRBV25-1A0A075B6N4 114 aa8.7□□□□□ -1.02
CNOT1-213ENST00000568158 IGHV1-24A0A0C4DH33 117 aa8.7□□□□□ -1.02
CNOT1-213ENST00000568158 F8W036 122 aa8.7□□□□□ -1.02
CNOT1-213ENST00000568158 SMKR1H3BMG3 65 aa8.7□□□□□ -1.02
CNOT1-213ENST00000568158 PPP1R2P9O14990 202 aa8.7□□□□□ -1.02
CNOT1-213ENST00000568158 MPV17L2Q567V2 206 aa8.7□□□□□ -1.02
CNOT1-213ENST00000568158 MRPL54Q6P161 138 aaKnown RBP8.7□□□□□ -1.02
CNOT1-213ENST00000568158 KCNIP4Q6PIL6 250 aa8.7□□□□□ -1.02
CNOT1-213ENST00000568158 LINC00862A6NCI5 91 aa8.69□□□□□ -1.02
CNOT1-213ENST00000568158 MT-ND4LP03901 98 aa8.69□□□□□ -1.02
CNOT1-213ENST00000568158 FUSP35637 526 aaKnown RBP eCLIP8.69□□□□□ -1.02
CNOT1-213ENST00000568158 IQCJQ1A5X6 159 aa8.69□□□□□ -1.02
CNOT1-213ENST00000568158 SPATA12Q7Z6I5 190 aa8.69□□□□□ -1.02
CNOT1-213ENST00000568158 Q8N976 141 aa8.69□□□□□ -1.02
CNOT1-213ENST00000568158 ANAPC16Q96DE5 110 aa8.69□□□□□ -1.02
CNOT1-213ENST00000568158 DYNC1H1Q14204 4646 aaKnown RBP8.68□□□□□ -1.02
CNOT1-213ENST00000568158 A0A087WTM6 91 aa8.68□□□□□ -1.02
CNOT1-213ENST00000568158 SDHAF1A6NFY7 115 aa8.68□□□□□ -1.02
CNOT1-213ENST00000568158 PSCAO43653 123 aa8.68□□□□□ -1.02
CNOT1-213ENST00000568158 RPS10P46783 165 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms