RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 AP1S3Q96PC3 154 aa5.44□□□□□ -1.54
SMG1-214ENST00000568038 NDUFAF3Q9BU61 184 aa5.44□□□□□ -1.54
SMG1-214ENST00000568038 DEFB131BA0A096LNP1 70 aa5.43□□□□□ -1.54
SMG1-214ENST00000568038 TRAV10A0A0B4J240 114 aa5.43□□□□□ -1.54
SMG1-214ENST00000568038 IGKV2-30P06310 120 aa5.43□□□□□ -1.54
SMG1-214ENST00000568038 RAB4BP61018 213 aa5.43□□□□□ -1.54
SMG1-214ENST00000568038 HBBP68871 147 aa5.43□□□□□ -1.54
SMG1-214ENST00000568038 ZNF56Q15929 161 aa5.43□□□□□ -1.54
SMG1-214ENST00000568038 UFSP1Q6NVU6 142 aa5.43□□□□□ -1.54
SMG1-214ENST00000568038 SMIM15Q7Z3B0 74 aa5.43□□□□□ -1.54
SMG1-214ENST00000568038 PHLDA1Q8WV24 401 aaPredicted RBP5.43□□□□□ -1.54
SMG1-214ENST00000568038 DPH3P1Q9H4G8 78 aa5.43□□□□□ -1.54
SMG1-214ENST00000568038 SMCO4Q9NRQ5 59 aa5.43□□□□□ -1.54
SMG1-214ENST00000568038 TRAV9-1A0A075B6T8 112 aa5.42□□□□□ -1.54
SMG1-214ENST00000568038 TGIF2-C20orf24A0A0A6YYL0 155 aa5.42□□□□□ -1.54
SMG1-214ENST00000568038 A0A0J9YY99 117 aa5.42□□□□□ -1.54
SMG1-214ENST00000568038 A0A1B0GW15 77 aa5.42□□□□□ -1.54
SMG1-214ENST00000568038 A0A1B0GXF2 115 aa5.42□□□□□ -1.54
SMG1-214ENST00000568038 RHODO00212 210 aa5.42□□□□□ -1.54
SMG1-214ENST00000568038 S100A8P05109 93 aa5.42□□□□□ -1.54
SMG1-214ENST00000568038 NPSP0C0P6 89 aa5.42□□□□□ -1.54
SMG1-214ENST00000568038 ELOBQ15370 118 aa5.42□□□□□ -1.54
SMG1-214ENST00000568038 ZFP2Q6ZN57 461 aa5.42□□□□□ -1.54
SMG1-214ENST00000568038 ATP5L2Q7Z4Y8 100 aa5.42□□□□□ -1.54
SMG1-214ENST00000568038 AMN1Q8IY45 258 aa5.42□□□□□ -1.54
SMG1-214ENST00000568038 KIF25-AS1Q9Y6Z4 181 aa5.42□□□□□ -1.54
SMG1-214ENST00000568038 NACAE9PAV3 2078 aa5.42□□□□□ -1.54
SMG1-214ENST00000568038 TRAV26-1A0A087WT03 109 aa5.41□□□□□ -1.54
SMG1-214ENST00000568038 CIDEAO60543 219 aa5.41□□□□□ -1.54
SMG1-214ENST00000568038 GATA1P15976 413 aaPredicted RBP5.41□□□□□ -1.54
SMG1-214ENST00000568038 LINC00315P59091 139 aa5.41□□□□□ -1.54
SMG1-214ENST00000568038 ZFAND6Q6FIF0 208 aa5.41□□□□□ -1.54
SMG1-214ENST00000568038 MUC7Q8TAX7 377 aa5.41□□□□□ -1.54
SMG1-214ENST00000568038 TMEM191AQ9H0A3 160 aa5.41□□□□□ -1.54
SMG1-214ENST00000568038 PRO0255Q9UI72 69 aa5.41□□□□□ -1.54
SMG1-214ENST00000568038 HHLA3Q9XRX5 114 aa5.41□□□□□ -1.54
SMG1-214ENST00000568038 NBEAL2Q6ZNJ1 2754 aa5.41□□□□□ -1.54
SMG1-214ENST00000568038 TRAV26-2A0A0B4J265 109 aa5.4□□□□□ -1.54
SMG1-214ENST00000568038 LOC100131303A0A0U1RQF7 123 aa5.4□□□□□ -1.54
SMG1-214ENST00000568038 IGLL5B9A064 214 aa5.4□□□□□ -1.54
SMG1-214ENST00000568038 P0DMU3 169 aa5.4□□□□□ -1.54
SMG1-214ENST00000568038 FAM231AP0DMU4 169 aa5.4□□□□□ -1.54
SMG1-214ENST00000568038 FAM231CP0DMU5 169 aa5.4□□□□□ -1.54
SMG1-214ENST00000568038 RAB4AP20338 218 aa5.4□□□□□ -1.54
SMG1-214ENST00000568038 CRYBA4P53673 196 aa5.4□□□□□ -1.54
SMG1-214ENST00000568038 SLAQ13239 276 aa5.4□□□□□ -1.54
SMG1-214ENST00000568038 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.54
SMG1-214ENST00000568038 FAM104BQ5XKR9 115 aa5.4□□□□□ -1.54
SMG1-214ENST00000568038 CEMP1Q6PRD7 247 aaPredicted RBP5.4□□□□□ -1.54
SMG1-214ENST00000568038 SLC25A29Q8N8R3 303 aa5.4□□□□□ -1.54
SMG1-214ENST00000568038 RNF185Q96GF1 192 aa5.4□□□□□ -1.54
SMG1-214ENST00000568038 YPEL4Q96NS1 127 aa5.4□□□□□ -1.54
SMG1-214ENST00000568038 PRADC1Q9BSG0 188 aa5.4□□□□□ -1.54
SMG1-214ENST00000568038 TENM3Q9P273 2699 aa5.4□□□□□ -1.55
SMG1-214ENST00000568038 HUWE1Q7Z6Z7 4374 aaKnown RBP5.39□□□□□ -1.55
SMG1-214ENST00000568038 TRBV24-1A0A075B6N3 115 aa5.39□□□□□ -1.55
SMG1-214ENST00000568038 TRBV6-4A0A1B0GX49 114 aa5.39□□□□□ -1.55
SMG1-214ENST00000568038 NUPR2A6NF83 97 aa5.39□□□□□ -1.55
SMG1-214ENST00000568038 SMKR1H3BMG3 65 aa5.39□□□□□ -1.55
SMG1-214ENST00000568038 K7EQD1 137 aa5.39□□□□□ -1.55
SMG1-214ENST00000568038 TNFRSF6BO95407 300 aa5.39□□□□□ -1.55
SMG1-214ENST00000568038 RHOHQ15669 191 aa5.39□□□□□ -1.55
SMG1-214ENST00000568038 MRPL51Q4U2R6 128 aaKnown RBP5.39□□□□□ -1.55
SMG1-214ENST00000568038 RASL11AQ6T310 242 aa5.39□□□□□ -1.55
SMG1-214ENST00000568038 TMEM136Q6ZRR5 245 aa5.39□□□□□ -1.55
SMG1-214ENST00000568038 GATD1Q8NB37 220 aa5.39□□□□□ -1.55
SMG1-214ENST00000568038 VSIG2Q96IQ7 327 aa5.39□□□□□ -1.55
SMG1-214ENST00000568038 FAM210BQ96KR6 192 aa5.39□□□□□ -1.55
SMG1-214ENST00000568038 Q9UF83 564 aa5.39□□□□□ -1.55
SMG1-214ENST00000568038 MEGF8Q7Z7M0 2845 aa5.38□□□□□ -1.55
SMG1-214ENST00000568038 PRKDCP78527 4128 aaKnown RBP5.38□□□□□ -1.55
SMG1-214ENST00000568038 GAGE12JA6NER3 117 aa5.38□□□□□ -1.55
SMG1-214ENST00000568038 H7C1H1 209 aa5.38□□□□□ -1.55
SMG1-214ENST00000568038 M0QY20 66 aa5.38□□□□□ -1.55
SMG1-214ENST00000568038 GAS8-AS1O95177 125 aa5.38□□□□□ -1.55
SMG1-214ENST00000568038 NCR2O95944 276 aa5.38□□□□□ -1.55
SMG1-214ENST00000568038 HLA-DQA1P01909 254 aa5.38□□□□□ -1.55
SMG1-214ENST00000568038 GAGE1Q13065 139 aa5.38□□□□□ -1.55
SMG1-214ENST00000568038 GAGE4Q13068 117 aa5.38□□□□□ -1.55
SMG1-214ENST00000568038 GAGE5Q13069 117 aa5.38□□□□□ -1.55
SMG1-214ENST00000568038 KIAA1644Q3SXP7 199 aa5.38□□□□□ -1.55
SMG1-214ENST00000568038 COX19Q49B96 90 aa5.38□□□□□ -1.55
SMG1-214ENST00000568038 NEXN-AS1Q8NBZ9 246 aa5.38□□□□□ -1.55
SMG1-214ENST00000568038 MRAP2Q96G30 205 aa5.38□□□□□ -1.55
SMG1-214ENST00000568038 GNB1LQ9BYB4 327 aa5.38□□□□□ -1.55
SMG1-214ENST00000568038 KLK5Q9Y337 293 aaPredicted RBP5.38□□□□□ -1.55
SMG1-214ENST00000568038 DNAH9Q9NYC9 4486 aa5.38□□□□□ -1.55
SMG1-214ENST00000568038 FBN3Q75N90 2809 aa5.38□□□□□ -1.55
SMG1-214ENST00000568038 A0A096LPF7 62 aa5.37□□□□□ -1.55
SMG1-214ENST00000568038 COLCA2A8K830 154 aa5.37□□□□□ -1.55
SMG1-214ENST00000568038 D6R8Y8 96 aa5.37□□□□□ -1.55
SMG1-214ENST00000568038 APCSP02743 223 aa5.37□□□□□ -1.55
SMG1-214ENST00000568038 CKS2P33552 79 aa5.37□□□□□ -1.55
SMG1-214ENST00000568038 RPS10P46783 165 aaKnown RBP5.37□□□□□ -1.55
SMG1-214ENST00000568038 RPL36AP83881 106 aaKnown RBP5.37□□□□□ -1.55
SMG1-214ENST00000568038 FABP9Q0Z7S8 132 aa5.37□□□□□ -1.55
SMG1-214ENST00000568038 ZNRF2Q8NHG8 242 aa5.37□□□□□ -1.55
SMG1-214ENST00000568038 FRZBQ92765 325 aa5.37□□□□□ -1.55
SMG1-214ENST00000568038 RPL39LQ96EH5 51 aaKnown RBP5.37□□□□□ -1.55
SMG1-214ENST00000568038 TRAPPC1Q9Y5R8 145 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms