RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 IGLV3-19P01714 112 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 IGKCP01834 107 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 HMGA1P17096 107 aaKnown RBP2□□□□□ -2.09
HERPUD1-212ENST00000567944 S100A4P26447 101 aaKnown RBP2□□□□□ -2.09
HERPUD1-212ENST00000567944 FKBP2P26885 142 aaKnown RBP2□□□□□ -2.09
HERPUD1-212ENST00000567944 CSN1S1P47710 185 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 DAPP51397 102 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 UBE2E1P51965 193 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 PCBD1P61457 104 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 RPS11P62280 158 aaKnown RBP eCLIP2□□□□□ -2.09
HERPUD1-212ENST00000567944 CCL8P80075 99 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 SPRNQ5BIV9 151 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 NMSQ5H8A3 153 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 TMEM170BQ5T4T1 132 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 Q5XG85 94 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 Q6ZS49 121 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 ATP5L2Q7Z4Y8 100 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 LHFPL1Q86WI0 220 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 TSKUQ8WUA8 353 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 CHCHD1Q96BP2 118 aaKnown RBP2□□□□□ -2.09
HERPUD1-212ENST00000567944 ABHD14BQ96IU4 210 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 UBE2E2Q96LR5 201 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 IGF2BP2-AS1Q96M15 143 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 OR8B2Q96RD0 313 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 GPX7Q96SL4 187 aaPredicted RBP2□□□□□ -2.09
HERPUD1-212ENST00000567944 SMIM7Q9BQ49 75 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 C20orf78Q9BR46 151 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 SHANK2-AS3Q9BTD1 123 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 SLC25A2Q9BXI2 301 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 OTORQ9NRC9 128 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 AMMECR1Q9Y4X0 333 aaPredicted RBP2□□□□□ -2.09
HERPUD1-212ENST00000567944 DNAJC15Q9Y5T4 150 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 SONP18583 2426 aaKnown RBP2□□□□□ -2.09
HERPUD1-212ENST00000567944 FLNAP21333 2647 aaKnown RBP2□□□□□ -2.09
HERPUD1-212ENST00000567944 CCDC88CQ9P219 2028 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 MAP1AP78559 2803 aaPredicted RBP1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 DNAJC13O75165 2243 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 NCOA6Q14686 2063 aaPredicted RBP1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 IGLV1-50A0A075B6I6 118 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 IGHV1OR15-9A0A0B4J2B8 117 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 TRBV27A0A0K0K1C4 114 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 MDFIC2A0A1B0GVS7 189 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 LOC107986453A0A1B0GWG9 222 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 C9JQL5 133 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 LINC01619G3V211 115 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 LY6LH3BQJ8 138 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 SYNGR2O43760 224 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 OR1I1O60431 355 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 BCE1O60756 84 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 APCSP02743 223 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 IL4P05112 153 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 C3orf79P0CE67 100 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 CXCL8P10145 99 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 FUT5Q11128 374 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 WFDC2Q14508 124 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 ELOCQ15369 112 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 TMEM155Q4W5P6 130 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 LGALS9CQ6DKI2 356 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 CLEC19AQ6UXS0 136 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 KTN1-AS1Q86SY8 53 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 LINC00643Q86TS7 51 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 NPWQ8N729 165 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 ZNF645Q8N7E2 425 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 STAG3L4Q8TBR4 150 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 TOMM6Q96B49 74 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 C18orf15Q96N68 181 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 TRGV9Q99603 122 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 FAM103A1Q9BTL3 118 aaKnown RBP1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 CMC2Q9NRP2 79 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 LINC00527Q9UJ94 153 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 CCL26Q9Y258 94 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 TMEM14AQ9Y6G1 99 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 LY96Q9Y6Y9 160 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 CSMD2Q7Z408 3487 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 ZNF469Q96JG9 3925 aaPredicted RBP1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 HIVEP2P31629 2446 aa1.99□□□□□ -2.09
HERPUD1-212ENST00000567944 TRBV20OR9-2A0A075B6H5 130 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 TMEM223A0PJW6 202 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 GRIFINA4D1Z8 144 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 RBAKDNA6NC62 111 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 OOSP1A8MZH6 123 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 F2Z2F3 143 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 H3BP45 60 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 K7EMT4 169 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 FXYD1O00168 92 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 CKS2P33552 79 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 GFERP55789 205 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 RPL30P62888 115 aaKnown RBP1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 UBE2BP63146 152 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 SERF2P84101 59 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 FOXF1Q12946 379 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 ZNF726P1Q15940 193 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 CFAP126Q5VTH2 177 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 NOXRED1Q6NXP6 359 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 SPATA12Q7Z6I5 190 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 PDPNQ86YL7 162 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 TMEM256Q8N2U0 113 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 SLC22A24Q8N4F4 322 aa1.98□□□□□ -2.09
HERPUD1-212ENST00000567944 SERP2Q8N6R1 65 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms