RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 C11orf52Q96A22 123 aa3.2□□□□□ -1.9
CLK3-219ENST00000567805 FAM210AQ96ND0 272 aa3.2□□□□□ -1.9
CLK3-219ENST00000567805 TM2D2Q9BX73 214 aa3.2□□□□□ -1.9
CLK3-219ENST00000567805 GNG13Q9P2W3 67 aa3.2□□□□□ -1.9
CLK3-219ENST00000567805 Q9UF83 564 aa3.2□□□□□ -1.9
CLK3-219ENST00000567805 URGCP-MRPS24S4R325 110 aa3.2□□□□□ -1.9
CLK3-219ENST00000567805 IGLV5-52A0A0A0MRZ9 124 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 PDE6DO43924 150 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 IFNA1P01562 189 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 C1QBP02746 253 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 SMIM17P0DL12 118 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 KRTAP10-1P60331 282 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 UBE2D3P61077 147 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 UBE2D2P62837 147 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 CCL20P78556 96 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 MEF2BQ02080 365 aaPredicted RBP3.19□□□□□ -1.9
CLK3-219ENST00000567805 ZNF56Q15929 161 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 CENPWQ5EE01 88 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 SPANXN1Q5VSR9 72 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 KCNIP4Q6PIL6 250 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 DAZ4Q86SG3 579 aaKnown RBP3.19□□□□□ -1.9
CLK3-219ENST00000567805 SLC51BQ86UW2 128 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 NIT1Q86X76 327 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 Q8N814 137 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 OR10AG1Q8NH19 301 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 SMIM12Q96EX1 92 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 CHCHD7Q9BUK0 85 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 DERL1Q9BUN8 251 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 DAZ3Q9NR90 486 aaKnown RBP3.19□□□□□ -1.9
CLK3-219ENST00000567805 COX11Q9Y6N1 276 aa3.19□□□□□ -1.9
CLK3-219ENST00000567805 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.19□□□□□ -1.9
CLK3-219ENST00000567805 A0A087WX48 190 aa3.18□□□□□ -1.9
CLK3-219ENST00000567805 TRBV6-8A0A0A6YYG3 113 aa3.18□□□□□ -1.9
CLK3-219ENST00000567805 XKRY2A2RUG3 117 aa3.18□□□□□ -1.9
CLK3-219ENST00000567805 EPM2AB3EWF7 344 aa3.18□□□□□ -1.9
CLK3-219ENST00000567805 IGLV2-8P01709 118 aa3.18□□□□□ -1.9
CLK3-219ENST00000567805 MALP21145 153 aa3.18□□□□□ -1.9
CLK3-219ENST00000567805 TAGLN2P37802 199 aaKnown RBP3.18□□□□□ -1.9
CLK3-219ENST00000567805 GNG4P50150 75 aa3.18□□□□□ -1.9
CLK3-219ENST00000567805 XGP55808 180 aa3.18□□□□□ -1.9
CLK3-219ENST00000567805 RPS20P60866 119 aaKnown RBP3.18□□□□□ -1.9
CLK3-219ENST00000567805 ELOBQ15370 118 aa3.18□□□□□ -1.9
CLK3-219ENST00000567805 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.18□□□□□ -1.9
CLK3-219ENST00000567805 NEXN-AS1Q8NBZ9 246 aa3.18□□□□□ -1.9
CLK3-219ENST00000567805 RMI2Q96E14 147 aa3.18□□□□□ -1.9
CLK3-219ENST00000567805 DAZAP1Q96EP5 407 aaKnown RBP3.18□□□□□ -1.9
CLK3-219ENST00000567805 AP1S3Q96PC3 154 aa3.18□□□□□ -1.9
CLK3-219ENST00000567805 TMEM70Q9BUB7 260 aa3.18□□□□□ -1.9
CLK3-219ENST00000567805 C1orf43Q9BWL3 253 aa3.18□□□□□ -1.9
CLK3-219ENST00000567805 BIN3Q9NQY0 253 aa3.18□□□□□ -1.9
CLK3-219ENST00000567805 VAX2Q9UIW0 290 aa3.18□□□□□ -1.9
CLK3-219ENST00000567805 FAT1Q14517 4588 aa3.18□□□□□ -1.9
CLK3-219ENST00000567805 MUC21A0A0G2JKD1 596 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 MUC21A0A140T8X8 626 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 C19orf71A6NCJ1 209 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 RBFOX3A6NFN3 312 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 F2Z2F3 143 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 F5H697 171 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 H7C1H1 209 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 P01737 135 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 IGLC6P0CF74 106 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 GZMBP10144 247 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 BCL2P10415 239 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 SSTP61278 116 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 PKIAP61925 76 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 CACNG7P62955 275 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 Q0VG73 95 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 TMEM97Q5BJF2 176 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 ATRAIDQ6UW56 229 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 Q6ZNX1 250 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 FER1L6-AS1Q8NA97 138 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 OR2D3Q8NGH3 330 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 FRZBQ92765 325 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 TPPP3Q9BW30 176 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 MED9Q9NWA0 146 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 KLK12Q9UKR0 248 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 KIF25-AS1Q9Y6Z4 181 aa3.17□□□□□ -1.9
CLK3-219ENST00000567805 SRRM2Q9UQ35 2752 aaKnown RBP3.16□□□□□ -1.9
CLK3-219ENST00000567805 TRBV20OR9-2A0A075B6H5 130 aa3.16□□□□□ -1.9
CLK3-219ENST00000567805 TRBV25-1A0A075B6N4 114 aa3.16□□□□□ -1.9
CLK3-219ENST00000567805 IGKV2D-24A0A075B6R9 120 aa3.16□□□□□ -1.9
CLK3-219ENST00000567805 RAB19A4D1S5 217 aa3.16□□□□□ -1.9
CLK3-219ENST00000567805 TMEM262E9PQX1 116 aa3.16□□□□□ -1.9
CLK3-219ENST00000567805 LECT2O14960 151 aa3.16□□□□□ -1.9
CLK3-219ENST00000567805 CRPP02741 224 aa3.16□□□□□ -1.9
CLK3-219ENST00000567805 TRGC1P0CF51 173 aa3.16□□□□□ -1.9
CLK3-219ENST00000567805 CTRLP40313 264 aa3.16□□□□□ -1.9
CLK3-219ENST00000567805 WFDC2Q14508 124 aa3.16□□□□□ -1.9
CLK3-219ENST00000567805 MPV17L2Q567V2 206 aa3.16□□□□□ -1.9
CLK3-219ENST00000567805 Q5VSD8 79 aa3.16□□□□□ -1.9
CLK3-219ENST00000567805 AKAP14Q86UN6 197 aa3.16□□□□□ -1.9
CLK3-219ENST00000567805 C9orf62Q8N4C0 152 aa3.16□□□□□ -1.9
CLK3-219ENST00000567805 Q8N976 141 aa3.16□□□□□ -1.9
CLK3-219ENST00000567805 UBE2WQ96B02 151 aa3.16□□□□□ -1.9
CLK3-219ENST00000567805 DNAJC30Q96LL9 226 aa3.16□□□□□ -1.9
CLK3-219ENST00000567805 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.15□□□□□ -1.91
CLK3-219ENST00000567805 TMEM250H0YL14 139 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 M0QY20 66 aa3.15□□□□□ -1.91
CLK3-219ENST00000567805 ANGP03950 147 aaKnown RBP3.15□□□□□ -1.91
CLK3-219ENST00000567805 MGPP08493 103 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms