RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	MEF2B	Q02080	365 aa	Predicted RBP	4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	PNRC1	Q12796	327 aa	Predicted RBP	4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	CFAP126	Q5VTH2	177 aa		4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	CST9LP1	Q5W188	147 aa		4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	ORAOV1	Q8WV07	137 aa		4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	FRZB	Q92765	325 aa		4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	C9orf85	Q96MD7	179 aa		4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	PRADC1	Q9BSG0	188 aa		4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	CTDSP1	Q9GZU7	261 aa		4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	TMEM242	Q9NWH2	141 aa		4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	LY96	Q9Y6Y9	160 aa		4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	IGKV3D-20	A0A0C4DH25	116 aa		4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635	LOC100131303	A0A0U1RQF7	123 aa		4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635	TRBV6-4	A0A1B0GX49	114 aa		4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635	CXCL1	P09341	107 aa		4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635	RNASE3	P12724	160 aa	Known RBP	4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635	EVI2A	P22794	236 aa		4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635	PTTG1IP	P53801	180 aa		4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635	TIRAP	P58753	221 aa		4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635	PIK3CD-AS1	Q5SR53	167 aa		4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635	SPATA12	Q7Z6I5	190 aa		4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635		Q86TA4	180 aa		4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635	NFE4	Q86UQ8	179 aa		4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635	SLC25A29	Q8N8R3	303 aa		4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635	NHLRC2	Q8NBF2	726 aa		4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635	SMIM12	Q96EX1	92 aa		4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635	FMC1	Q96HJ9	113 aa		4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635	MIEN1	Q9BRT3	115 aa		4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635	TNFRSF18	Q9Y5U5	241 aa		4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635	HECTD4	Q9Y4D8	3996 aa		4.71	□□□□□ -1.66
SF3B3-209	ENST00000567635	HERC2	O95714	4834 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	IGHV3-73	A0A0B4J1V6	119 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	TRBV6-1	A0A0K0K1D8	114 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	ZNF727	A8MUV8	499 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635		A8MWV9	139 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	SCGB1D1	O95968	90 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	DNAH10OS	P0CZ25	163 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	MGST1	P10620	155 aa	Known RBP	4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	ASIP	P42127	132 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	CRIP1	P50238	77 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	UBE2G1	P62253	170 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	RPL19	P84098	196 aa	Known RBP	4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	FAM162B	Q5T6X4	162 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635		Q6ZRN7	208 aa	Predicted RBP	4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	COX8C	Q7Z4L0	72 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	WFDC10B	Q8IUB3	73 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	ZC2HC1A	Q96GY0	325 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	BTF3L4	Q96K17	158 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	VPS25	Q9BRG1	176 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	IL36B	Q9NZH7	164 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	MSRB1	Q9NZV6	116 aa		4.7	□□□□□ -1.66
SF3B3-209	ENST00000567635	TRAV8-6	A0A0B4J262	113 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	IGHV3-38	A0A0C4DH36	116 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	XKRY2	A2RUG3	117 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	TMEM238	C9JI98	176 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	SH2D1A	O60880	128 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	CDK2AP2	O75956	126 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	LTA	P01374	205 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	KRTAP10-2	P60368	255 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	UBE2V1	Q13404	147 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	RHOH	Q15669	191 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	WDR73	Q6P4I2	378 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	ZFP2	Q6ZN57	461 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635		Q6ZSN1	163 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	C10orf126	Q8N4M7	172 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	SYT8	Q8NBV8	401 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	ATP6V0E2	Q8NHE4	81 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	C11orf52	Q96A22	123 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	SMIM7	Q9BQ49	75 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	PARL	Q9H300	379 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	NAT8	Q9UHE5	227 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	DNAH17	Q9UFH2	4485 aa		4.69	□□□□□ -1.66
SF3B3-209	ENST00000567635	PKHD1	P08F94	4074 aa		4.68	□□□□□ -1.66
SF3B3-209	ENST00000567635	GRIFIN	A4D1Z8	144 aa		4.68	□□□□□ -1.66
SF3B3-209	ENST00000567635	CRYGD	P07320	174 aa		4.68	□□□□□ -1.66
SF3B3-209	ENST00000567635	ARMS2	P0C7Q2	107 aa		4.68	□□□□□ -1.66
SF3B3-209	ENST00000567635	RNF151	Q2KHN1	245 aa		4.68	□□□□□ -1.66
SF3B3-209	ENST00000567635	OR10J3	Q5JRS4	329 aa		4.68	□□□□□ -1.66
SF3B3-209	ENST00000567635	LELP1	Q5T871	98 aa		4.68	□□□□□ -1.66
SF3B3-209	ENST00000567635	PET117	Q6UWS5	81 aa		4.68	□□□□□ -1.66
SF3B3-209	ENST00000567635	NUDT11	Q96G61	164 aa		4.68	□□□□□ -1.66
SF3B3-209	ENST00000567635	IMMP2L	Q96T52	175 aa		4.68	□□□□□ -1.66
SF3B3-209	ENST00000567635	GTSF1L	Q9H1H1	148 aa		4.68	□□□□□ -1.66
SF3B3-209	ENST00000567635	JPT2	Q9H910	190 aa		4.68	□□□□□ -1.66
SF3B3-209	ENST00000567635	PHLDA3	Q9Y5J5	127 aa		4.68	□□□□□ -1.66
SF3B3-209	ENST00000567635	URGCP-MRPS24	S4R325	110 aa		4.68	□□□□□ -1.66
SF3B3-209	ENST00000567635	TMSB15B	A0A087X1C1	80 aa		4.67	□□□□□ -1.66
SF3B3-209	ENST00000567635	SCO2	A0A1W2PP80	73 aa		4.67	□□□□□ -1.66
SF3B3-209	ENST00000567635		H3BVH4	76 aa		4.67	□□□□□ -1.66
SF3B3-209	ENST00000567635	RHOD	O00212	210 aa		4.67	□□□□□ -1.66
SF3B3-209	ENST00000567635	RPL23	P62829	140 aa	Known RBP	4.67	□□□□□ -1.66
SF3B3-209	ENST00000567635	LINC01556	Q5JQF7	62 aa		4.67	□□□□□ -1.66
SF3B3-209	ENST00000567635	UFSP1	Q6NVU6	142 aa		4.67	□□□□□ -1.66
SF3B3-209	ENST00000567635	LINC01551	Q86U37	167 aa		4.67	□□□□□ -1.66
SF3B3-209	ENST00000567635	BAGE2	Q86Y30	109 aa		4.67	□□□□□ -1.66
SF3B3-209	ENST00000567635	VAMP8	Q9BV40	100 aa		4.67	□□□□□ -1.66
SF3B3-209	ENST00000567635	SAMD10	Q9BYL1	202 aa		4.67	□□□□□ -1.66
SF3B3-209	ENST00000567635	SCRT2	Q9NQ03	307 aa		4.67	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 166 ms