RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 MIC13Q5XKP0 118 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 DCUN1D2Q6PH85 259 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 TMEM91Q6ZNR0 172 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 DYNLRB2Q8TF09 96 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 CCDC115Q96NT0 180 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 LXNQ9BS40 222 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 LINC00472Q9H8W2 130 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 TAS2R8Q9NYW2 309 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 SPCS1Q9Y6A9 102 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 SETD2Q9BYW2 2564 aaPredicted RBP-0.36□□□□□ -2.47
CDH1-211ENST00000567320 DCHS2Q6V1P9 2916 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 LRRC37A2A6NM11 1700 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 NWD2Q9ULI1 1742 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 CREBBPQ92793 2442 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 UHRF1BP1LA0JNW5 1464 aa-0.36□□□□□ -2.47
CDH1-211ENST00000567320 C2CD3Q4AC94 2353 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 NSD3Q9BZ95 1437 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 UBR4Q5T4S7 5183 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 APC2O95996 2303 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 CSPG4Q6UVK1 2322 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 ARHGEF12Q9NZN5 1544 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 ACANP16112 2415 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 FLNBO75369 2602 aaKnown RBP-0.37□□□□□ -2.47
CDH1-211ENST00000567320 FLNAP21333 2647 aaKnown RBP-0.37□□□□□ -2.47
CDH1-211ENST00000567320 ARAP2Q8WZ64 1704 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 FMN2Q9NZ56 1722 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 PKDREJQ9NTG1 2253 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 PNMA8CA0A1B0GUJ8 204 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 FAM92AA1XBS5 289 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 J3QLW9 94 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 APOC1P02654 83 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 COX6B1P14854 86 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 HIST1H1BP16401 226 aaKnown RBP-0.37□□□□□ -2.47
CDH1-211ENST00000567320 SRP9P49458 86 aaKnown RBP-0.37□□□□□ -2.47
CDH1-211ENST00000567320 GNG10P50151 68 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 MRPS15P82914 257 aaKnown RBP-0.37□□□□□ -2.47
CDH1-211ENST00000567320 DEFB112Q30KQ8 113 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 S100A7L2Q5SY68 101 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 Q5VV11 94 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 PPP1R2P3Q6NXS1 205 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 TMED4Q7Z7H5 227 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 CROCCP2Q86T23 111 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 DEFB105AQ8NG35 78 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 ATP6V0E2Q8NHE4 81 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 PPP1R1CQ8WVI7 109 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 AP3S1Q92572 193 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 AMELXQ99217 191 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 NPVFQ9HCQ7 196 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 GID8Q9NWU2 228 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 FAT3Q8TDW7 4589 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 GAPVD1Q14C86 1478 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 PXDNQ92626 1479 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 ADAMTS12P58397 1594 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 USF3Q68DE3 2245 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 SPAG17Q6Q759 2223 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 COL4A6Q14031 1691 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 MUC17Q685J3 4493 aa-0.37□□□□□ -2.47
CDH1-211ENST00000567320 MAP1AP78559 2803 aaPredicted RBP-0.37□□□□□ -2.47
CDH1-211ENST00000567320 SPTBN2O15020 2390 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 STAB2Q8WWQ8 2551 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 BTAF1O14981 1849 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 MYO7BQ6PIF6 2116 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 PCNX1Q96RV3 2341 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 ZNF292O60281 2723 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 TRAV2A0A0B4J234 112 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 LINC00959A0A1B0GUT2 108 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 APOC4-APOC2K7ER74 178 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 M0R135 149 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 PIN1P1O15428 100 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 PAEPP09466 180 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 PIRTP0C851 137 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 HLA-DRB4P13762 266 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 TCTAP57738 103 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 UBE2G1P62253 170 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 DCDP81605 110 aaKnown RBP-0.38□□□□□ -2.47
CDH1-211ENST00000567320 DEFB135Q30KP9 77 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 TMEM244Q5VVB8 128 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 Q6JHZ5 121 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 ATP11AUNQ6ZP68 121 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 BAGE3Q86Y29 109 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 NDUFA11Q86Y39 141 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 DEFB123Q8N688 67 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 MNS1Q8NEH6 495 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 SPTSSBQ8NFR3 76 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 CDC26Q8NHZ8 85 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 AIF1LQ9BQI0 150 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 CCDC32Q9BV29 185 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 CRIPTQ9P021 101 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 SMPXQ9UHP9 88 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 ERG28Q9UKR5 140 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 LAMTOR2Q9Y2Q5 125 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 LINC00312Q9Y6C7 94 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 HLA-DRB4X5D2U9 266 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 ARHGEF10O15013 1369 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 WNK1Q9H4A3 2382 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 MAP1BP46821 2468 aaKnown RBP-0.38□□□□□ -2.47
CDH1-211ENST00000567320 SBF2Q86WG5 1849 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 PATJQ8NI35 1801 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 SPEF2Q9C093 1822 aa-0.38□□□□□ -2.47
CDH1-211ENST00000567320 MARF1Q9Y4F3 1742 aaKnown RBP-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms