RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 TTC32Q5I0X7 151 aa8.39□□□□□ -1.07
SF3B3-208ENST00000567250 SUMO4Q6EEV6 95 aa8.39□□□□□ -1.07
SF3B3-208ENST00000567250 RASL11AQ6T310 242 aa8.39□□□□□ -1.07
SF3B3-208ENST00000567250 ATP5L2Q7Z4Y8 100 aa8.39□□□□□ -1.07
SF3B3-208ENST00000567250 NEXN-AS1Q8NBZ9 246 aa8.39□□□□□ -1.07
SF3B3-208ENST00000567250 ZNRF2Q8NHG8 242 aa8.39□□□□□ -1.07
SF3B3-208ENST00000567250 DNAJC30Q96LL9 226 aa8.39□□□□□ -1.07
SF3B3-208ENST00000567250 CTDSP1Q9GZU7 261 aa8.39□□□□□ -1.07
SF3B3-208ENST00000567250 CARHSP1Q9Y2V2 147 aaKnown RBP8.39□□□□□ -1.07
SF3B3-208ENST00000567250 TRAV8-6A0A0B4J262 113 aa8.38□□□□□ -1.07
SF3B3-208ENST00000567250 M0QY20 66 aa8.38□□□□□ -1.07
SF3B3-208ENST00000567250 HBBP68871 147 aa8.38□□□□□ -1.07
SF3B3-208ENST00000567250 C10orf91Q5T1B1 145 aa8.38□□□□□ -1.07
SF3B3-208ENST00000567250 LELP1Q5T871 98 aa8.38□□□□□ -1.07
SF3B3-208ENST00000567250 KCNIP4Q6PIL6 250 aa8.38□□□□□ -1.07
SF3B3-208ENST00000567250 Q9H8V8 135 aa8.38□□□□□ -1.07
SF3B3-208ENST00000567250 TNFRSF18Q9Y5U5 241 aa8.38□□□□□ -1.07
SF3B3-208ENST00000567250 SIVA1O15304 175 aa8.37□□□□□ -1.07
SF3B3-208ENST00000567250 UBE2D3P61077 147 aa8.37□□□□□ -1.07
SF3B3-208ENST00000567250 UBE2D2P62837 147 aa8.37□□□□□ -1.07
SF3B3-208ENST00000567250 RHEBQ15382 184 aa8.37□□□□□ -1.07
SF3B3-208ENST00000567250 TMEM97Q5BJF2 176 aa8.37□□□□□ -1.07
SF3B3-208ENST00000567250 OR10J3Q5JRS4 329 aa8.37□□□□□ -1.07
SF3B3-208ENST00000567250 DAZ4Q86SG3 579 aaKnown RBP8.37□□□□□ -1.07
SF3B3-208ENST00000567250 IMMP2LQ96T52 175 aa8.37□□□□□ -1.07
SF3B3-208ENST00000567250 DAZ3Q9NR90 486 aaKnown RBP8.37□□□□□ -1.07
SF3B3-208ENST00000567250 DNAH1Q9P2D7 4330 aa8.36□□□□□ -1.07
SF3B3-208ENST00000567250 IGLV2-18A0A075B6J9 118 aa8.36□□□□□ -1.07
SF3B3-208ENST00000567250 K7EP13 123 aa8.36□□□□□ -1.07
SF3B3-208ENST00000567250 CAMPP49913 170 aa8.36□□□□□ -1.07
SF3B3-208ENST00000567250 MRAP2Q96G30 205 aa8.36□□□□□ -1.07
SF3B3-208ENST00000567250 NIT2Q9NQR4 276 aa8.36□□□□□ -1.07
SF3B3-208ENST00000567250 NBDYA0A0U1RRE5 68 aa8.35□□□□□ -1.07
SF3B3-208ENST00000567250 SNAPINO95295 136 aa8.35□□□□□ -1.07
SF3B3-208ENST00000567250 S100PP25815 95 aa8.35□□□□□ -1.07
SF3B3-208ENST00000567250 MRPL54Q6P161 138 aaKnown RBP8.35□□□□□ -1.07
SF3B3-208ENST00000567250 SVBPQ8N300 66 aa8.35□□□□□ -1.07
SF3B3-208ENST00000567250 BTF3L4Q96K17 158 aa8.35□□□□□ -1.07
SF3B3-208ENST00000567250 SACSQ9NZJ4 4579 aa8.35□□□□□ -1.07
SF3B3-208ENST00000567250 TRAV9-1A0A075B6T8 112 aa8.34□□□□□ -1.07
SF3B3-208ENST00000567250 TRAV9-2A0A087WT02 112 aa8.34□□□□□ -1.07
SF3B3-208ENST00000567250 TRAV26-2A0A0B4J265 109 aa8.34□□□□□ -1.07
SF3B3-208ENST00000567250 A0A1B0GXF2 115 aa8.34□□□□□ -1.07
SF3B3-208ENST00000567250 PPP1R17O96001 155 aa8.34□□□□□ -1.07
SF3B3-208ENST00000567250 APOC3P02656 99 aa8.34□□□□□ -1.07
SF3B3-208ENST00000567250 WFDC10BQ8IUB3 73 aa8.34□□□□□ -1.07
SF3B3-208ENST00000567250 AMN1Q8IY45 258 aa8.34□□□□□ -1.07
SF3B3-208ENST00000567250 GATD1Q8NB37 220 aa8.34□□□□□ -1.07
SF3B3-208ENST00000567250 CLRN3Q8NCR9 226 aa8.34□□□□□ -1.07
SF3B3-208ENST00000567250 TMEM242Q9NWH2 141 aa8.34□□□□□ -1.07
SF3B3-208ENST00000567250 Q9UF83 564 aa8.34□□□□□ -1.07
SF3B3-208ENST00000567250 VPS13DQ5THJ4 4388 aa8.34□□□□□ -1.07
SF3B3-208ENST00000567250 IGHV3-38A0A0C4DH36 116 aa8.33□□□□□ -1.08
SF3B3-208ENST00000567250 M0R2N4 97 aa8.33□□□□□ -1.08
SF3B3-208ENST00000567250 DNAH10OSP0CZ25 163 aa8.33□□□□□ -1.08
SF3B3-208ENST00000567250 RAB4AP20338 218 aa8.33□□□□□ -1.08
SF3B3-208ENST00000567250 PKIAP61925 76 aa8.33□□□□□ -1.08
SF3B3-208ENST00000567250 C10orf126Q8N4M7 172 aa8.33□□□□□ -1.08
SF3B3-208ENST00000567250 RPS10P5Q9NQ39 176 aa8.33□□□□□ -1.08
SF3B3-208ENST00000567250 C7orf77A4D0Y5 90 aa8.32□□□□□ -1.08
SF3B3-208ENST00000567250 BTF3P20290 206 aaKnown RBP8.32□□□□□ -1.08
SF3B3-208ENST00000567250 LINC01556Q5JQF7 62 aa8.32□□□□□ -1.08
SF3B3-208ENST00000567250 FAM104BQ5XKR9 115 aa8.32□□□□□ -1.08
SF3B3-208ENST00000567250 Q6ZR54 194 aa8.32□□□□□ -1.08
SF3B3-208ENST00000567250 RNF185Q96GF1 192 aa8.32□□□□□ -1.08
SF3B3-208ENST00000567250 URGCP-MRPS24S4R325 110 aa8.32□□□□□ -1.08
SF3B3-208ENST00000567250 RYR2Q92736 4967 aa8.31□□□□□ -1.08
SF3B3-208ENST00000567250 TRBV25-1A0A075B6N4 114 aa8.31□□□□□ -1.08
SF3B3-208ENST00000567250 TRBV6-8A0A0A6YYG3 113 aa8.31□□□□□ -1.08
SF3B3-208ENST00000567250 TRBV6-5A0A0K0K1A5 114 aa8.31□□□□□ -1.08
SF3B3-208ENST00000567250 CHCHD7Q9BUK0 85 aa8.31□□□□□ -1.08
SF3B3-208ENST00000567250 IGHV1-24A0A0C4DH33 117 aa8.3□□□□□ -1.08
SF3B3-208ENST00000567250 SDHAF1A6NFY7 115 aa8.3□□□□□ -1.08
SF3B3-208ENST00000567250 PPBPP02775 128 aa8.3□□□□□ -1.08
SF3B3-208ENST00000567250 COTL1Q14019 142 aa8.3□□□□□ -1.08
SF3B3-208ENST00000567250 RPL39LQ96EH5 51 aaKnown RBP8.3□□□□□ -1.08
SF3B3-208ENST00000567250 ST20Q9HBF5 79 aa8.3□□□□□ -1.08
SF3B3-208ENST00000567250 A0A087WX48 190 aa8.29□□□□□ -1.08
SF3B3-208ENST00000567250 NCR2O95944 276 aa8.29□□□□□ -1.08
SF3B3-208ENST00000567250 CKS2P33552 79 aa8.29□□□□□ -1.08
SF3B3-208ENST00000567250 COX19Q49B96 90 aa8.29□□□□□ -1.08
SF3B3-208ENST00000567250 MRPL51Q4U2R6 128 aaKnown RBP8.29□□□□□ -1.08
SF3B3-208ENST00000567250 C1orf134Q5TEV5 83 aa8.29□□□□□ -1.08
SF3B3-208ENST00000567250 C6orf223Q8N319 242 aa8.29□□□□□ -1.08
SF3B3-208ENST00000567250 CHCHD5Q9BSY4 110 aa8.29□□□□□ -1.08
SF3B3-208ENST00000567250 RYR3Q15413 4870 aa8.29□□□□□ -1.08
SF3B3-208ENST00000567250 IQCJQ1A5X6 159 aa8.28□□□□□ -1.08
SF3B3-208ENST00000567250 NIT1Q86X76 327 aa8.28□□□□□ -1.08
SF3B3-208ENST00000567250 ORMDL3Q8N138 153 aa8.28□□□□□ -1.08
SF3B3-208ENST00000567250 TMEM70Q9BUB7 260 aa8.28□□□□□ -1.08
SF3B3-208ENST00000567250 DNAH6Q9C0G6 4158 aa8.28□□□□□ -1.08
SF3B3-208ENST00000567250 D6R8Y8 96 aa8.27□□□□□ -1.09
SF3B3-208ENST00000567250 I3L3M4 83 aa8.27□□□□□ -1.09
SF3B3-208ENST00000567250 PHOX2AO14813 284 aa8.27□□□□□ -1.09
SF3B3-208ENST00000567250 UBE2L6O14933 153 aa8.27□□□□□ -1.09
SF3B3-208ENST00000567250 IGHV3-30P01768 117 aa8.27□□□□□ -1.09
SF3B3-208ENST00000567250 IGHV3-33P01772 117 aa8.27□□□□□ -1.09
SF3B3-208ENST00000567250 HLA-DQA1P01909 254 aa8.27□□□□□ -1.09
SF3B3-208ENST00000567250 APCSP02743 223 aa8.27□□□□□ -1.09
SF3B3-208ENST00000567250 IGHV3-30-3P0DP02 117 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms